XLOC_032653 (mRNA) -

Overview
NameXLOC_032653
Unique NameXLOC_032653
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000392_pilon:167296..175490-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_032653 ID=XLOC_032653|Name=XLOC_032653|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8195bp|location=Sequence derived from alignment at sc0000392_pilon:167296..175490- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTTATCTATTTTTTACCATGAAGCTTCACATCTTTATTTACTTTCT CGTTGCTGTCAGTGTTATTGTGGATGCTTCTGAAAAGGTAAATATATGTA ACAAACAATAACAATTTCTGGAATCTTGGTCTATATTGCCGTGGGGGTAA GTCACCGTTAGAGAAAATCCCCTATTTTTTTTTTTACCTTTCATGGTTCT TGTATCATTAAAAGGGCTCACAAAGGGGGAAATCCCTACCCTTAGCTTGA GGGGTTATTTTAACTTTTTTTGTAATGCTCGTAGAGAGACCCTTACTGTC CATACCCGGGTCAGTCTGGGGTTTTTATAAGACACAAATACTTTGAATTT TACAGAACAGCAAGAAAAGCATTTACTTGCTCACCCTAAAATTCATTTAA ACAAAAGACTTAGATTTGGCAAAAATAAGACATGTAATGTAAATGTAGAA ACACTATTCCCTCTACAATATTCATTTATCCAAGGTCCCAAAGGTCCCGA GGTCCCGAGATGAGAATACACCAAATACACCCCAAAATAAACATATACCC CCTTGGTCCCAACGGTCCCGAGGTCCCGAGATGAAATTATATCAAATACA CCCAAAATACACATATACCCCCCTTAGTCCCCGAAGGTCCCGAGGTCCGA GATGAGAATACACCAAAACACCCAAATATACTATACCCCCCTTGGCCCAA AGGTCCCGAGGTCCCCGAGATTAGAATACCAAAAACACCCCCAAAATACC ATATACCCCCTTGGTCCCGAAGGTCCCGAGTCCCGAAGATGAAGATACCA ATAAAAACACCCCAAATATACATATACCACCTTGGTCCCGAAGGTCCCGA GGTCCCGAGGTGAGAATACACCAAATACACCCTAAAATACACATACCCCC TTGGTCCCAAATGTCCCGAGGTCCCGAGATGAGAATATACCAAATACACC CCAAAATACACATATACCCTCTTAGTCCCGAAGGTCCCGAGGTCCCGAGA TGAGAATATACCAAATACACCCCAAAATATACATATACACCCCCTTAGTC CCGAAGGGTCCCGAGGTCCCGAGGTGAGAATAACCAATCAAATACCCTAA AATCACATACCCCCTGGACCCCATGTCCCGAGGTCCCGAGATGAAATATA CAAAATACACCCCAAAATACACATATACCCCCTTAGTCCCGAAGGTCCCG AGGTCCCGAGATGAGAATACACCAAAGTACACCCCAAAATACACATATAC CCCCTTGGTCCCAAAGGTCCCGAGGTCCCGAGATGAGAATATACCAAATA CACCCCAAAATATACATATACCCCCTTAGTCCCGAAGGTCCCGAGGTCCC GAGAGAATAACCAAATACACCCCCAAAATATACATATATCCCCTTGGTCC CAAAGGTCCCGAGGTCCCGAGATGAGAATACACCAAATACACCCCAAAAT ATACATATACCCCCTTGGTCCCAAAAGTCCCGAGGTCCCGAGATGAAATT ATATCAAATACACCCCAAAATACACACATACCCCCTTAGTCCCGAAGGTC CCGAGTATGAAATACACCAATACCCCAAAATATACATAATACCCCCTTGG TCCCAAAGGTCCCGAGGTCCCGAGATGAAAATACACAAATACACCCCAAA AATACACATATACCCCCCTTGGGTCCCGAAGGTCCCGAGGTCCCGAGATG AGAATATACCAAATACACCCCAAAATATACATATACCCCCCCCTTGTCCC CAAAGGTCCCGAGGTCCCGAGATGAAATACACCAAATACACCCAAAATAT CATTACCCCCGTAGTCCAAAGGTCCGAGGTCCCGAGATGAGAATAGACCA ATACAACCCCAAAATACCATAGACCCCCTTGGTCCAAAGGTCCTGGAGAT GAAAATACACCAATAACCACAAAATAACATATACCCCTTAGTCCCAAAGG TCCCGGGTCCGCGAGATGAGAATTACAAATCCACCCCAAATATACATATA CCACCCCCTTTCCCCGAGGTCCCGAGATGAGAATACACCAAATACACCCC AAAATATACTATACCCCCCTTGGTCCCAAAGGTCCCCGAGTGGTAAAACA ACCCCAAAATATACATATACCCCCTTGGTCCCAAAGTCCCCGAGATTGAA TACCCAAATATACCCCAAAATTTGGTCCCGAAGGTCCCGAATCCCGAGAT GAGAGATAGTTCCCGAGGTGAGAATCACCACACACCCTAAAATACACATA CCCCCTTTCCCAATGTCCCGGTCCGAGATGAGAATATACATATTAGCTCA AAATATGGGATTGTGCTTAAGCTAGAAAAATTTATTTTTCTTTTTAAGCA TCAACTTTATAAGAACACAATTCATAAATCTTAAACCAATGATTATTTTT TTTTCGGCGTTTGGCTCTTTCAAAGTAAGTACAGTAATCTAGAAACATTT ATTTTTCTTATAAGCATCAACTTTATAAGAACACAATTCATAAATCTTAA GCCAATGATTATTTTTTTTCGGCGTTTGGCTCTTTCAAAGTATGTATAGG ATTGCGCTTAAACTAGAAACATTTGTTTTTCTTATAAGCATCAACTTTAT AACAACACAATTCATAACTCTTAAACACTATTTGTTAGCTTTTGTTTGAT AAAAGAAATCAAATCTCTGAAAGCCTATTCCACTTAGAAAAATATCCTTG TTCTTATAAAATTCTTATAAACTAATTTTAGATTTAGCAAAATTGCCCAT TTCTTTCGTATATTCTTAAGCTTACCATGTTCTCCCTTGTTAACTTTGTA AAAACTACCGTATTTCTTCGAATAAACGTCCTGGGCGTCTTTTTAATTTT AAGACTTTCAAGAGGGGTGTTAATTAAAAAATTTAAAACCTCCCATTGAG GGGAGTCTTTTTCCTCAGAGAAGGAGCGTGTATTCGAAGGAATACGGTAA TTACCGAAAGGTATATACTATTCTACAAAGAGTTATTTGATTCTCATAAA CTAGTTGCTTATAGGAAAAATTAATATACTCATATTATTTGCTCCCCCTA GTTTACTTTGTAAGAACTATTTACCGAAAGGTATATAACCTCTATCAAGA GTTATTGCTTTGATTCTTGTAAAGTTAATGCTTACAAGAAAAATAAATAT GCTCACATTATGTGCCATCCCTTGTTTACTTGCAAACTAATAACCGAAAG ATATATTAACCTCTATCAAGAGTTATTGCTTTGATTCTTTTAAAGTTAGT GCGCACAAGAAAAATAAATATGCTCACATTATGTGCCGTCCCTTGTTTAC TTGCAAAAACTAATAAACCGAAAGATATATTAACCTCAATCAAGAGTTAT TGCTTTGATTCTTTAAATTAATGCTTACAAGAAAATAAAATCCTCACATT ATCGTCCCTTGTTTACTTTGTAAAAACTAATTACCAAAAGGTATATCACC GTCTATCAAGAGTTATTGATCTGTTTCTTATAAAGTAGGTGCTTATAAGA AAAATGATTATTTTCATTTTAGGCGCTAATTCCATGTTTGCTTTGAAAGA GCCAATCACCGAAAGCTAAAACTTAGGGTTGAAAGTTATAGATCTTATTG CTTATAAGAAAATAATTTTTTTCCATTTGAGGCGCTATTCCATGTTTGCT TGAAAGAACAATCACCGAAAGCTTAAACTTAGTGGTGAAAAGTTTAGATC ATTTTCTTATAAATGATCTTTAATGGTGATGCTTAAAAAGATATTACTTC TGTATTTGATAGAGCTAAAATACCTAAAGCCAAAAAAGGTAAAGTAATGG GGGAAAGCTAGCAATGTTTTACATATCTGCGCAAATTTTTATTACATATC TGTGCAGCTCGAAATTACATAGTTGCCCAAAATAATTACATATTTGCGCA AAATTACATATCTGCGCAATAATTACATATCTCTGGCACAACATCTCGGG ACCTTTGGGACTAGGGGGTAATGTATATTTTCGGTGTATTTTGGTATATT CTAATTCGGGCTCGGGACCTTGGGACAAGGGGTATATGTAATTTGGGTGT ATTTTGCTTATTCTCATCTCGGGACCTCGGGACTTTGGGACCAAGGGGTT ATATGAATATTTTGGGGTGTATTTGGTATTCTTATCTCGGACCTCGGACC TTCGGGACTAAGGGGTATATGTATATTTTTGTTTTGGTAATCTAGGGCTC GTAGACCTCGGAGACTTACTGTCCTATCACGAATATAGAACTGGTTCGGT ATTTTAGCCGACCTACAGACCCTGCACCTAATTTTGCCTAAGTATCCCCA GGAGGCTTCATTGACACAAATGGAAAGGCTCAAAACACCTATCTAATACT ACTTACTTCAAAAGGCAGATCTGAAAGGGGTTCAAAGTTTATCATGGAGA GTCTTCTCTTCGTTAAAGACTACAGCTGATCGAAACATCCCCACTTTTTA CTCCCTACTCCATTTGGATACCAGAACTCCCAAGCCTTGCTTTGACTCAA CCTTGTACAAAATCCATACTCATATATTTACATATAATTTACTTTCAATA AATATGCTTTTCAAGAGAATAATTTGAATGTTTACATTATTAGGTTTTGC CTCATGTTTAAAACAAAAGGACAGGTGCATTTTGACATTTTGTTTCCAAA ATTTGTGCAAAAATGACTCCTAATGAGACTTAAAAACCCAAATAATTTAC TAAGAATGTTCCAATTTCTCCCAATTTTTAGCACCCTACGGAAAAAAGAC TTTTTTTCCCATTTTCTGTTTTTGCAACCCTATACTTGGGACTGGTGTGA TGAATTTTGAGTGTTTGTGTGAGGGAGATATTTTTTCACTACTTAACAAA TTCTGTCACAAAATGTAAGAAGTCAGTAAACTATAGAAAAAAATGCAGGA AATATCAGCAAAATAAAAGAGAAAAAAGATTTTCATGACTATCAATAAGA ACCAGTCCAAAAGTAAATCGCAAAAAAACTATATAGAAGAAGCAAATTTG ATTTCAAAAACCACTACTGTTAATAAATTCTTTTTTTTTAAGATTTTAAT ATCTCAAAAAGTACTAACTAATCAAAAGATTTGCTTGAGTATATACCCCC CCCCTCGGCTCATCCTAAAGCTTGAAATTTATGGCTCAGGTTTAGACCGA CTTTAATATCATTCTCAACAATTGATAATCAAATATTTTCATTTCAAAAC CTCAAAATGAAATAATAAATTTTCCACTATGCGGGAGTACAGTACATTTA TTTGCCTTGCAGACATCATAATCTAGATGTAAGATATCTCAATCAAATTT GAGTATCAGTAAGAAAAAACGTATTGAATTTTGGTATTTTGGTATGAATT CATAACGATAATTGTACCAATGATTACATAGGCGAAACTGCTTGACGTCT AATCAGAGGACTGGATGAGCACATAGTAAAAGCTAACAAAAAATTCCCAA ATAAAGCGTTTTTGTTGAGATGATTATTTGAAATTATAGCTATTCATTCT AAAAAATCTAAAATATAATAATGAAAAATATTTCTACTGGGTGACCCACG AAAAAGTATAAGAGTTTTGAGGGTAACTGTGTCCGAAAAAATATTGAATT TTAACTAGATTCTCTTTTCGTGGTAAAGAGGAAAGGCAAACTTAAATTTT GATGTATCATTTTTTAATTTTGGAAAAGTAGTTATCGAGATATGGAGGTA AAAAGTCAAAAGTCATTATAAAAACAGTCAAAAAACGTCAAAAAAGACAG TATCAAATTTGTATCAGAACAAACATCTTTCCTTTGATCATTTTGCTATT TCTTTGTCTTAAAAGTTTCGTTAAGAAAAAAATAAGTAATTTCGAATTTT GGACAATTCCCAAATCATCCTTTTGGGAATAAATAGAAAGTACCAAAAGT AGCAAAAAGAGTTTTCAACCTTTGTTATTCTTTTCTGAATCCTTCCGGTA AGAGAAATCAATTATGCTTCTGATCACTCGATGTCCCTTTCTATTTGTTA ATCAATCAATTTGATATTGTCTTTTTGATGTTTTTAAACTGTTTAAACCA TATCTCGATTTAACTACTTTTCCAAAATTAAAAAATGATACATCAAAATT TAAGTTTGCCTTTCCTCTTTACCATGAAAAAAGACTTTAGTTAAAATTCA ATTTTTTTCGGACACAGTTACCCTCTTATACTTTTTCGTGGGTCACCCGG TATTAAACTATAATTTAAATAATTTGTAATTTGTAATTCATTACCCCTCA TTTCTTATAAATGACATTTCAATATCTCACTGGATTAGAGTTTTTTTCTT TTACTCATTGTATAGATTCTTTCTTTCAGAGTTTCTTTTATTAACAAATT TAAATAAAACAATTAAAAGAAATCAATATGTTTTTGCTTTCTTTTAAATC ATTTTGGATCCATATATAAAATTTCTAATCTGGTCAACTTGTTCCGAAAT AATGAGCTTTTCCAGTATTACTATATTTTAAAGTTTAAGTTTGGGTCCTA TATTTAGACCCTGATCGTTTGTGCTAAATTTCATTCTTTCATCATCGTTT GAAGTACTGTCGCGCGTTTTTATGCTCTAAAACACTCCGCTCAGTCAAAA TTTGATAATGTTAGAGATTGCAATATTTAACGCTTTCCTCCATTATTGAA TTATAAGATTACGATTAATTACGTCACAACCCGATCCAGAACCTTCAAGA TATTGCGAGTCCCTGAAAACACTTCCTATTGATCCAGATTGATATGAAAT TTCTGATTCTAAAGTTTGCTGTAAAGTGATATAAAAATATGTTTAAATTA TTTCCTCTTTTTAAAGGGATCCCTCTCAAGAAGACTGAAAAGACAGACCG ATCGGTGAGTCATTAAAAACTCATTTTCTTTCCCACCTAATTTAATATTC TATTTAAGATCTTAGAGTATCAGTGCTAAAGAAACAGTCAATAATATTTC AAACTATACTCTTGATTTTAGATGTAACAAGAATGCCTTTGTCAACAAAT ATGGTGAATGTCAGTGTATCAGAAATATGATAACCTTCAAGAGGGATAAT CAAATATTTTGTGAAAAATGTCCCGGAAAGTGCCCTGAATGCATGGGAAC AAAGTATTTTTGTGACCTTTGGGTCCCATACCATGACTATGATGGCAAAC CAGTGGTATGCTCTGACCCACCTCCTGGCATGTACATCAAGCATGGAAAA TTTGAAATGTGTAGTCCAAAATGCCATCATTTAGAGATTCAAAAGAGGGA CTGTGGCTGCGGTAACCGTTTATGTCAGTGTCCAAAAGGAATTTACCGAG ATGTGTACAAGGATTGCACAAAAAAATGCTCAAAATGTATGAATGTACAT CATATTCGAGTGTCAACTGGCGAATGTGATTCAATGCCAGAAGGAATGGT AGGTTGCCGTATTGTGGGTCTTTGATTGATCTATATCTTTCCTTTGATTT TTTATTCTCGAGGCAATTGTTTAGGTTTTACAGCCCTGCCTCAGTGACCC ACTGGACCTTTTGTTTTCCGAAAAGTCAAGCAGATGGAGTGTTCTAAATT TGAATTTCGTACACTTTATTTTCGTTGGTGTTGAGGATATTTTTCAAGTG AGCAAAATATGGTAATGGAGTGTTTTCGAAATAGAGTAGAAAGACTTTCT TCGACAGGTCTTTTTGTGATATCTTATTTTACATTTAGAGATGTCTTGAA CGAGATGACCCAAAACAGGAAACTACCACCACACCACCAACACCCTACAC AACCAAGACTAAACCAATATCTACTCTATCAATCACCCCATCTATTTCAT CAACAGTTATGACAACAAAAAATTCTCCAACAACGAGACTTCGTCCCACA ACAAAGCCTGCAACCACAACCAAAAATTCTCCAACAACGAGACTTCCTCT CACGACAAATTCCACTACTACAACACAGAATCCTCCAACAACGAGACTTC GTCCCACAACAAAGTCTGCAACCACAACCAAAAATCCTCTAACAACGAGA CTTCCTCCCACGACAAAGTCCACTACCACAATACATAATCCTTCAACAAC GAGATTTTCTTCCACGATAAAGCCTACAACCACAACCAAAAATCCTCCAA CAGCGAGACTTGCTCCCACGACAAAACATGCTAACACAACAATAGACTTT AGTCCACCTAATCATGAAGGAACAAATAATTATGATCCAATAGCA

Coding sequence (CDS) from alignment at sc0000392_pilon:167296..175490-

>XLOC_032653 ID=XLOC_032653|Name=XLOC_032653|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2118bp|location=Sequence derived from alignment at sc0000392_pilon:167296..175490- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTTATCTATTTTTTACCATGAAGCTTCACATCTTTATTTACTTTCT
CGTTGCTGTCAGTGTTATTGTGGATGCTTCTGAAAAGATGTCTTATCTAT
TTTTTACCATGAAGCTTCACATCTTTATTTACTTTCTCGTTGCTGTCAGT
GTTATTGTGGATGCTTCTGAAAAGGGATCCCTCTCAAGAAGACTGAAAAG
ACAGACCGATCGGGATCCCTCTCAAGAAGACTGAAAAGACAGACCGATCG
ATGTAACAAGAATGCCTTTGTCAACAAATATGGTGAATGTCAGTGTATCA
GAAATATGATAACCTTCAAGAGGGATAATCAAATATTTTGTGAAAAATGT
CCCGGAAAGTGCCCTGAATGCATGGGAACAAAGTATTTTTGTGACCTTTG
GGTCCCATACCATGACTATGATGGCAAACCAGTGGTATGCTCTGACCCAC
CTCCTGGCATGTACATCAAGCATGGAAAATTTGAAATGTGTAGTCCAAAA
TGCCATCATTTAGAGATTCAAAAGAGGGACTGTGGCTGCGGTAACCGTTT
ATGTCAGTGTCCAAAAGGAATTTACCGAGATGTGTACAAGGATTGCACAA
AAAAATGCTCAAAATGTATGAATGTACATCATATTCGAGTGTCAACTGGC
GAATGTGATTCAATGCCAGAAGGAATGATGTAACAAGAATGCCTTTGTCA
ACAAATATGGTGAATGTCAGTGTATCAGAAATATGATAACCTTCAAGAGG
GATAATCAAATATTTTGTGAAAAATGTCCCGGAAAGTGCCCTGAATGCAT
GGGAACAAAGTATTTTTGTGACCTTTGGGTCCCATACCATGACTATGATG
GCAAACCAGTGGTATGCTCTGACCCACCTCCTGGCATGTACATCAAGCAT
GGAAAATTTGAAATGTGTAGTCCAAAATGCCATCATTTAGAGATTCAAAA
GAGGGACTGTGGCTGCGGTAACCGTTTATGTCAGTGTCCAAAAGGAATTT
ACCGAGATGTGTACAAGGATTGCACAAAAAAATGCTCAAAATGTATGAAT
GTACATCATATTCGAGTGTCAACTGGCGAATGTGATTCAATGCCAGAAGG
AATGAGATGTCTTGAACGAGATGACCCAAAACAGGAAACTACCACCACAC
CACCAACACCCTACACAACCAAGACTAAACCAATATCTACTCTATCAATC
ACCCCATCTATTTCATCAACAGTTATGACAACAAAAAATTCTCCAACAAC
GAGACTTCGTCCCACAACAAAGCCTGCAACCACAACCAAAAATTCTCCAA
CAACGAGACTTCCTCTCACGACAAATTCCACTACTACAACACAGAATCCT
CCAACAACGAGACTTCGTCCCACAACAAAGTCTGCAACCACAACCAAAAA
TCCTCTAACAACGAGACTTCCTCCCACGACAAAGTCCACTACCACAATAC
ATAATCCTTCAACAACGAGATTTTCTTCCACGATAAAGCCTACAACCACA
ACCAAAAATCCTCCAACAGCGAGACTTGCTCCCACGACAAAACATGCTAA
CACAACAATAGACTTTAGTCCACCTAATCATGAAGGAACAAATAATTATG
ATCCAATAGCAAGATGTCTTGAACGAGATGACCCAAAACAGGAAACTACC
ACCACACCACCAACACCCTACACAACCAAGACTAAACCAATATCTACTCT
ATCAATCACCCCATCTATTTCATCAACAGTTATGACAACAAAAAATTCTC
CAACAACGAGACTTCGTCCCACAACAAAGCCTGCAACCACAACCAAAAAT
TCTCCAACAACGAGACTTCCTCTCACGACAAATTCCACTACTACAACACA
GAATCCTCCAACAACGAGACTTCGTCCCACAACAAAGTCTGCAACCACAA
CCAAAAATCCTCTAACAACGAGACTTCCTCCCACGACAAAGTCCACTACC
ACAATACATAATCCTTCAACAACGAGATTTTCTTCCACGATAAAGCCTAC
AACCACAACCAAAAATCCTCCAACAGCGAGACTTGCTCCCACGACAAAAC
ATGCTAACACAACAATAGACTTTAGTCCACCTAATCATGAAGGAACAAAT
AATTATGATCCAATAGCA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_032653XLOC_032653-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000392_pilongenomesc0000392_pilon:167296..175490 -
Properties
Property NameValue
Aaloc553-1059:508
Aaloc127-552:1224
Aaloc88-123:1380
Aaloc1-87:8196