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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000196_pilon:103501..110418- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_032634 ID=XLOC_032634|Name=XLOC_032634|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6918bp|location=Sequence derived from alignment at sc0000196_pilon:103501..110418- (Clytia hemisphaerica_ch_hm2_pilon)
ACAGCCAAGAGTAAGGCAAAATTGACAGTCAAGAAGCGAAAACACATTGT
ATTGGTGCTTGATAAGGTATGTTTTTTGTACACATTAGATGTGTTCTTTA
TAACTAGGCAGGTGAGGTCACAAAAATATACCAAGATAAAGATAAAAATG
TCATATTTATTCAAAGCAATTACCATAAGTTCATTCACAAACTTTGCTAT
GCGACCCCAGCTACCTGACTATTAGTTTTCATTTATTTACATTTATGATT
CGTTTTCCAGGTCTTACAATCGTTGCCGTGGGAAAGTATTCCAATATTAC
GTCATCAACCCATCAGTCGTATGCCGTCAATTTTGCTGACCAGAACTCAT
TGTGATTCGTATAAGGTAAAGAAGTGTTTTCTGTTGAATAAACCGCAGAA
ACTCCATTGACGCTTTGTATTTATACATAAAGAACACTGGTGAGATAGAT
GTACGTGTTTCCACTTCTTGGAATTTCTTCATTATTTTTGAATATTCCAT
TACACCTTCAGAATTTAGCACTGAGCATTGAGCAATGCTTATTTAGTTGG
GACAAAATGAAGGAGTAAAATGACAATAAGATAAGAAATCTCGTGATTTT
ATCAGTGGTCATTTCAAATTCTATTAATTGCGGCTCGTGATCTGTAGGGC
CTAGCAGATATGCAACTATTAGGTAATCCATCCTGACAACATAAAAAAAG
TGGTTTTTCTTTTTCTTGACAGGGCCTTCTAGAGGATGGACTGAACACGG
AGAACAGTTATTACATTTTGAATCCACGAAATGATTTGAAACGAACGGAA
ACAATGTTCCAACAATATTTCATCGAGTAAGTGGATATTATCATAGATCA
TTCAGTACTACAGTAGAGTCTCCATAACTCGAACAACCACGGGGGACATA
AGGAAATATCGAGTTACATAGGTTTATAAGGGTTTGTTAACTGAAGGGAC
CATAAAACTTATTCGAGTTTTTAAGAAGACATTCGAATTGTAGAGACTCC
ACTGTATCTACAGTATTGTTTGTCAAAAAAATTAATACGAATGGAAATTA
TATCCAGAGTTACCTCGTTTGCCATATAATGATCTCTTTATTCTAATTCT
TACTTTACTTTAATAGGATAAACTTTCGTGGGGAATAAATTTCGCGGATT
TCGCGGATTTGGGTGTCCCAATGGAAATTTGGAAGTGCCTGATCCGCGAA
ATATTTCTAAACAAAACTCAGAATATGTCAAATAAATATATGAATGGTTA
CTTGCATCAAAGAGGCGCAAATAATGTGTATTTCAACAACCAACATGCAT
GATTTGACAGTAAAAGTCACAAAATCGTGAAAATAATTGCCACCCAATAG
TGCCACCCGCTTTATTAAGTCCCCGCGAAATTTTTGAATTTCGCGGATAG
GTCCAACCGCGAAATTTAATCCCCGCGAAAGTTTATCCCATTAAAGTATT
TCTTTCTTGTCACTTCAGTGCAAAATGGCAAGGCATTGTGGGTCGTGCGC
CGACAAGTGACGAATTCTCCAAAGCACTCACTCAACACGATTTATTTGTG
TAAGTTGTTTTCGGCAGCATCAAAACACACTCCCACTAATTTTGCCATTT
TCTGCTCACCATCCCCATCTCTTCCTTGCCACATAAAAATCTATTTAACA
ATGATTTCATATTATCCAGTTCAATAGATAAAGAATTAAAGAAGTCACTA
AAGAAACAGTTTAAATAACCAAGATATATTGCTTAAAATCCAAAATATAG
AAAGGTTTACCTTCTTCTTTCTTCTCATCATGTAACCTTTTTTGCTACAT
CACCTTCTTTCCCAAAACTTGGACGTTCTTTATAGATATCCCCCTCCAGA
ATCTTGTAAAATAGTTCGTGTTCAATAATGTTGTCCGTTTACTCTTAATT
TTTCAGAAACAGGACAGGGGTTTCTTAGGAAACTCTGATATGTTTTCATA
TAAAATTCCCGTCCGAGAGATACCACCGGCTTTCTGATTTTGAGTTTTAG
AAACCTGTTTTGCTTGATTTAAGTTTTCCCGGGGGGGGGGGGGCACTCCG
ATTTCGAAACGAAGTATGTGCCGCGCAAAATCTGCTTTCAAATCGTACCC
TTACAGAGAGTCAATATGGCTGAAAAGTAACCGTCGTGATTTTCTCTGAT
TTACAACCCTTATAGTGCACTATATTCTCAGCTGTAAATCTGCGAAAGAA
GAAGCTTGGAATTTTCTTCATCAAAGAAAAACTGAGAAATTATTCGTCCA
GCTGTAATTATCAGACAAAAAACGTTTTCAAACAAACAAGTAAAAAACCT
TTTTTTTAACAATTTTTGGAATTTTGTTTAAAATTCAACCCTTCATGCAT
CTCCAGAAACACCCTTACAGTGCATTTGAGATGCTAAAAAAAACCCCACC
TTAAGCGCGGCACACGACTAGGCCAGATCATATGAGAGCCCCCCCCCCCC
AAAAAAAAATCGCCCGTACGTGCATTTCACCAATTTACACCGTGAGGTGA
AATATGGTTAGGTGTGTTTATGTTCTTTCTTAAGTGATGCAAAGGTACAA
GTGTACTTAGCTCGAGCTAATCATATCACTTAATTACAGATATCTAGAAG
TTGATACTCAGACAACGATTATTTACAATTAATTTAATTCGCAAGAAACC
GCGCATGGATAAAATGCGACGTTTCCAAGGACAATAGTGGGCCTCCATTG
CTGAGGTTTTTTAAATTCATCTAGGTTTTTAAGTTTTTTAAAGTATCAGA
AGGGTAGCCCAATTTTAGGTCCCAGGAAAGCTAAAGACGATTTCCCAGGC
CTTTAACTACCTACTACGAAAGGAATCCGGGGTCTCGGGGATCTCATTGG
GGGGAGAAAGACGTCTGGCGGAGGCGGGAGGTGTGGAGGTAGTCGCGGTG
ATGGAGGGAACGGGTCAAGGGCAACAGATCATCGAGATATTGAGCTGAAA
ACATTCTCAGCATCGTTATGTAGGTGATTATCCTCGGAGATATGCTAGAA
CCCATATGAGAGGACAGTAATTGAAGGGCATTAAATGAAAGCATCCATCA
GCGTTTCTTTTTCTAAAGTGAGATAGTGCCATCGGGTTAAGGCGTTATTG
CAACGAGCTTTCTGCAAGATTTTCTATATGCGATCAAACGTAAAAGATTA
TCGAAGGTTACCCAAGAACTTTGCGTTTTGGTATGAAAACAGTTTTCTTC
TCTAAGATAGAGGCGAGTCGCAATGATTTAACTATTACTGACATTTGTCG
CATTACCAACCAGTTATTAATCGAAAGCCATGGAAGATTTTTCTGCTACA
ACATAGTTTACCACTTACTTCAATCCAGGTAGAGCACGACATAGGGTGTG
TATCGTCCGCATAATCGCAACCTTAGTATCCTCAATGAGGAAAGAGGTCA
CAGATATATATTGAAAAACAGAGGACCAAGGATGATCCCTGGGGAACACC
ATCCTTGATCTTGATCCATTACTCAGTTCGTTGCCTACTTTGTCCTTTGT
TGCCTATTTTCTAGATATCTGAACTCTGACAAAGGTCATCGAACCCTAGG
CACTGATCTTTGCTACAAGTAATGTGTGGAACAGTCAAGGCCTTAGAAAG
GTCGATGAGCAGTGCCCCAAAACATCTTTTTGGTCATTGGCTAGCTTCCA
GAGCTCTTCATTGGAGAGAGATTTGAGTGGAATTCCGTCGAAACCACTTG
TTGTTCATCAAAGTATGCTCAAAGTATTCTGATATTTGATGTATATACTC
TTTCTAATTTTGGATATTACGGCAGTTACTGATTGGTCATAGTGACTTTT
ATCGTTTTAGAATTTTCTGTAGACTGGGGTACTGTCCAACTGAAATGTTG
GGAAAATACCTGAGCTGAAGAGTCATTATGCTATGAGAAGCAGCTTGCAA
TAAGTGAGAGGATTTTTTAATTATTTCGCTGATATCTTTCCGCTTGAGAC
TTATTTGTCTTAGGTTACTATTATCTTCTCTACTTCGTCTCGGTGGTGTT
TCTAACTTGAAGGAGTTTCATGTTGATACTTTTCTTTATTTGAGTATACT
TGTGGGTCTAAAAGATTATTCATTGAAGAATATATCGAAAGTCATTGAAG
GCACTGGTTCTGTGTGGTGATTAATCTAATTTTTAGTGATATTTTAAGAC
TCCTAACATTTTTCCAATTCTTTATCATCTTAATAGTTCATCATTTTCGA
CTAAGGTTATTTTCTCACTTATTGGTCCTTTATTGGAAAAAGGGCGCACA
GTTTTCAAAATTTTTTGTCAGTGATTTGCTTTTCATCCGAATTCAAAATC
TTCTTTTAGGTTTCTCAGGAGATATAAGCATCGTTTCGCTGTTTTGTTAA
TTATATTTGTTAATGTTAGAGGGTCTTTTCGTTAATGTTATTAAGTCGAG
ATCGATGCATCATGGCTTTCGTAGTGATTTTGTCATGAAAGGTTTATCAT
TACCTCTTAGTATTTTAGTTTTTATCGGGCTTCAGCGTTTAGAAGATTTT
TTACTACACTTTTTCATCTTATGTTCAAAGTTGCGATTCGACTCAAGTAC
TGTGTTAAATGATTTTTGAAAAGATCTTCGTTAAGATTTTGTAGCATCTA
TATTTAATGGCTTTAGGTGGACACTTTTCAAAAGTGGTTTTTAAGACGCT
TATTGTGATGTTGTGAAAGTCCGATAGCTATAGATACAGAGGAAGAGCCC
GGAAAACTTCTTTGGTAATTTTTAGCATCAGATCAATGCATTTTGGATTG
CTGCGTTTTGAAGCACGTATGTTCATTTATCAAGCTAGAAAGCTCCCGCT
AGCAAGAAACTCGGCATTTTATGTTTGCGATTTCACAATTGAAATCCCCC
ATAGTAAAAGTCGGTCATGATCTCCTATAGAATCAAGGCAATTTTGTAAA
AGCTCTAAATGTGAATTTATATTGCTACATGCGGATTATAAGAGCAACCC
AGTAGCCATTTTGCTCTTAGTTGACCTCGATGAATATAGCTTCATAATTC
TGTCTTTTAATACGAGTTTAGAAGGATGCCCTGACGTACGTAGAGTAGAA
GACCTCCTCCCTGTTTGTCCCTGTCCAAGCGATATGGACGCGAGTAGTTT
TCAATAATGAAATGATTTTCAGGGATGATTCGTCAATCTTAGTTTCAGAT
ACCAAAAAAATGTCTACGTTATCTTTGATAACTAATTTGAGACCTTCAAA
TTTGTATTTATCGAGTTGATATTAAGATGTCTATGAGACATTTGCGACGT
TATTAATACGGATTTTTCTCAGAGCCTTTTCTTCGAATTCATAAGACTTT
TCCGTTGGTTTGTCAAGCAATGGGGGACCATCTACATACCTTTCACTGTC
ACCCTTTTCTTTGTTGTTGGATTCATCGTTGTCTGTACTGTTTTTGTCGT
TTTCATTGGTTTTGTTGGTGATTTTTATGTTTGTGTTTTTTCTTGGTATT
TCTTTAAGGTTCGTTGTGTAGGGTGTTAATGTTGGTTTTCTCTTCGACGA
AACTTCCTGAGGCCATAACGGGATAATATCAGTTTGTATAATTTGCCCCT
CCGTTACTTTTTGCTCGTTTTGCTTATCTGAAATAGTCTTCTAGCATGCT
AGGCTACTTTAGTTCAACAAAACACCATCGTTTTTGTAATTTTTTACCAG
TTATTGTGGTCACGGGAGCGGACAAGAGTATCTTGGTTGGGATGCAATGC
AACGACTTCATTGCAAATCCGTCGCCCTGTTGATGGGATGCAGCAGTGGG
AAACTGGTGGTGAGTTAATTCGTACCATGTGCTGTGGTGGGAATTTTTTA
ACTAATGTAAATGAAATAAGGGAGCTACTCTAATACAATAATGACCGGTT
AGTGAGGGTTTACTGAGAAATATTGCCCGAGGTCAATTAACGACCGAGCT
TGCGAGGCTGTTGCGTTGACCGAGGGCAATATTTTCAGTACAGCCCGAAA
AAAACCGGTCATTATTGTATTTGTTAACCGTTTCCTTCAGCTTCGATTGA
TTTTTAGCGCTTTATCCAGGAAAAATAGCGAAATAAAGCGAAAAAAATAA
TGAATTTTCCTAACGACGGGCAACTCTGGACAATGTAGGCATGCGGATTT
AATTAAACGGATTTGTTTTTCGAGCCAAAAAAATCGCGAAATTTTGTGAG
TTTATTTTCGAAAATTAGCGCTTTGAAAGCGCGATAGAAAACAGTTTGTA
TTTTCCAAGTGAATTTTCTCGAGGTCTAAAGATGAAGGAACCATTAATGC
AGTTTGTTTCTAATGATCTCTTTCAGGCGAAAGGCTCATTAGAAGCTCAA
GGAATGGTGCAATACTACTTGCTGTCTGGAAGGTTAGTGACTGTCATCAA
CATTTACGATCGTTTTTATCCAAGATTTTTACTAATTTTTGTGAAACAGA
GAGTTTTCTTTAAATTTTCAAACTCGAGGATTGGCCTAATAGAAATTTTT
TACCATGTCAAAGTTTCGGGGCTACATCAGGCAGAAATTTGTACTTTGTA
CGTGTCAAAAATGAAAAATCACTATGGTCAAAGCCCTTAAATTGCCTTAT
TGCCTGAAAATTTCTTAACATAAGGCAGATTTATATGAAAAGTACTTTTT
TCGCGAGAATTTCTGACCTTTTTTCCATAATTTAGTTCGATAAATAGATA
ACTTATTCAGCCGGTCCTCAATTTTCCACAGAACCTTTATAACTCGACTG
TATTCATTGTTTTCAGTCCTGCGATCGTGGCTAATTTATGGGACGTTACG
GATAAAGATATCGACCTCTTTCTTCAACAATTGCTCGAGCTTTGGTTAAC
CGAGACAAACGGAGGAGACCTTGCTTCTTGTGTAAGCGAGGCAAGAGAAG
CATGCAAACTGGAATATCTGATTGGTGCAGCTCCCGTCGTGTATGGGTTA
CCACTTGTTGCTCGATAA Coding sequence (CDS) from alignment at sc0000196_pilon:103501..110418- >XLOC_032634 ID=XLOC_032634|Name=XLOC_032634|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1446bp|location=Sequence derived from alignment at sc0000196_pilon:103501..110418- (Clytia hemisphaerica_ch_hm2_pilon)
ACAGCCAAGAGTAAGGCAAAATTGACAGTCAAGAAGCGAAAACACATTGT
ATTGGTGCTTGATAAGACAGCCAAGAGTAAGGCAAAATTGACAGTCAAGA
AGCGAAAACACATTGTATTGGTGCTTGATAAGGTCTTACAATCGTTGCCG
TGGGAAAGTATTCCAATATTACGTCATCAACCCATCAGTCGTATGCCGTC
AATTTTGCTGACCAGAACTCATTGTGATTCGTATAAGGTCTTACAATCGT
TGCCGTGGGAAAGTATTCCAATATTACGTCATCAACCCATCAGTCGTATG
CCGTCAATTTTGCTGACCAGAACTCATTGTGATTCGTATAAGGGCCTTCT
AGAGGATGGACTGAACACGGAGAACAGTTATTACATTTTGAATCCACGAA
ATGATTTGAAACGAACGGAAACAATGTTCCAACAATATTTCATCGAGGCC
TTCTAGAGGATGGACTGAACACGGAGAACAGTTATTACATTTTGAATCCA
CGAAATGATTTGAAACGAACGGAAACAATGTTCCAACAATATTTCATCGA
TGCAAAATGGCAAGGCATTGTGGGTCGTGCGCCGACAAGTGACGAATTCT
CCAAAGCACTCACTCAACACGATTTATTTGTTGCAAAATGGCAAGGCATT
GTGGGTCGTGCGCCGACAAGTGACGAATTCTCCAAAGCACTCACTCAACA
CGATTTATTTGTTTATTGTGGTCACGGGAGCGGACAAGAGTATCTTGGTT
GGGATGCAATGCAACGACTTCATTGCAAATCCGTCGCCCTGTTGATGGGA
TGCAGCAGTGGGAAACTGGTGTTATTGTGGTCACGGGAGCGGACAAGAGT
ATCTTGGTTGGGATGCAATGCAACGACTTCATTGCAAATCCGTCGCCCTG
TTGATGGGATGCAGCAGTGGGAAACTGGTGGCGAAAGGCTCATTAGAAGC
TCAAGGAATGGTGCAATACTACTTGCTGTCTGGAAGGCGAAAGGCTCATT
AGAAGCTCAAGGAATGGTGCAATACTACTTGCTGTCTGGAAGTCCTGCGA
TCGTGGCTAATTTATGGGACGTTACGGATAAAGATATCGACCTCTTTCTT
CAACAATTGCTCGAGCTTTGGTTAACCGAGACAAACGGAGGAGACCTTGC
TTCTTGTGTAAGCGAGGCAAGAGAAGCATGCAAACTGGAATATCTGATTG
GTGCAGCTCCCGTCGTGTATGGGTTACCACTTGTTGCTCGATAATCCTGC
GATCGTGGCTAATTTATGGGACGTTACGGATAAAGATATCGACCTCTTTC
TTCAACAATTGCTCGAGCTTTGGTTAACCGAGACAAACGGAGGAGACCTT
GCTTCTTGTGTAAGCGAGGCAAGAGAAGCATGCAAACTGGAATATCTGAT
TGGTGCAGCTCCCGTCGTGTATGGGTTACCACTTGTTGCTCGATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000196_pilon | genome | sc0000196_pilon:103501..110418 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 523-723:202 |
| Aaloc | 466-519:643 |
| Aaloc | 358-465:1268 |
| Aaloc | 277-354:5450 |
| Aaloc | 172-273:6197 |
| Aaloc | 67-171:6659 |
| Aaloc | 1-66:6919 |
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