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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000001_pilon:3778972..3784250+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_032569 ID=XLOC_032569|Name=XLOC_032569|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5279bp|location=Sequence derived from alignment at sc0000001_pilon:3778972..3784250+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTGTATCTAGAGGACTACATTGAATGTAAGAagtattttgtcaattt
ttgtgatttttgatttctataTCTAGACTTAAAaggctttgtttttaaat
gagagTGACACTGATAGCGTtagcttactcgtcaattttaatttacaagc
tttttacattgaattgacacggatgtggagcaagattggtcagaaagagg
aaaaaaacattttttgcttctatcagcacaatataacaataggcagacac
tgtcctgatatgaaacgggaacacttgatgtaaaaataaaacttttaatg
tTTTCCGGTATTATGTACTAAGTACTATATACACCAAACTATGCCAACCT
TAACTTTAACTATTGCAtttttttAGTAATTGAACAACTACCACAAGATC
TGCGAGATCGTTTCACAGATATGAGAGAACTGGATTTGAAAGTTCAAAGT
ATTTATTATATTGCTTTTGTATTTCATTTCACTTTTCATACATTTACACG
TAATTATccgttttgaataatttttctcctttttcatGTGCAATACTTTG
AGAATTACAATTGCGAAATAGCAAGTTTTTAAATGCCCTAGATGAAAAAT
AATCTTCGAGTTTTACTTAATTGAACTACTTTGCACAGTGTTGCATCTGT
AGACAGAAACCTGCCCATTTGAGAGGCAAATGCCTCGTTTCAGTCTTGCC
AGTAAGAGGACCCATTGATCCCAAATCTCCATCCATTCACAAAAGCTAGT
TGCAAAACTGACTTCGTTTTAATAAATTTGTTTTAGATAATATTGATACA
TTGGATTCAAGAGTGCGTCGTTTTTTCACGGAGGCTCGCAAATCAAAGCC
AGATCAAGTGGAAGAggattataaaaacattcatcAAAGTTACAAACAAG
CTTTGGATAATGCGGATGAGAAAGTCTCTATGGCATCACAAATATATGAC
CTGGTAAATCTTGATTCAATAAGAACATGATACAGTGGGGTCTCCATAAC
TCGCACGCACgtggaacacaaatttgttcaagttgaggaaattttgagtt
atggagtaaggtttaaaaGGCATTGGTTACTGAAGGGACCGTAAAAAGTT
TAAGGaggcattcgagttatagaggttcaagtaAAAGAGACTCCGCCGTA
TCTCCTTTCACCCATAAGCATGACATTTCAAACTATTCAAAGACACAgga
aaactactttttttttaagaatggaacattcttcaatttcattttctgtt
TTCGTACCTTTCGCAACACCACACTTATTGCTAAAGATGTTCGCTTTAAA
CTAATCACTTTGTAcactgttttttttgttgatgaTCTGACTGAATATTA
TTTTAGGTCGATCGACATTTAAGAAAGCTTGATCAAGAACTCAGTCGTTT
CAAAATGGAATTAGAAGCAGATTGTTCCGGCATCACAGAAATCCTTGAAA
GAAGTattttcattcatcattaccctatttggaattttgttgtttttatc
gatttttgtcacttttgcAAAAGTGCGGGATCGCGAGAGATCGCTGATTC
CAGCCgactcgcgaaagttaatgcaCGAGAAATCTCATATTAAAAAAGTC
AGATTTTCAGTGTAAGATCCATCAGAATCCATTTTTGACCTTTTATAGAG
CCcctttcaaataatttttagcaGATTCGCTAAATTAAATCTACAGGAAA
TCTTCATTATTACCATGTTTAAAATTGTCATacttaaatttttattgatt
ttcaggGTCAGTGGTTGGGGCTGAAGAGCGCACATTGGACTTGCTTTACA
ATTCAACTTTCAGCAACACGACCGGAGAACCTTTGAGTAAGTCATCTGAC
ATTGCCATAAAAGAGGGTCGACAAAAGCCAAAGTCCTATTTCAAATCTTG
GTGTTCAAAATGGATTCAGCTCTAACCATAATGCAATTCCTTCTTTCTTG
CTTTGAATATCCATTGTGTCTAGAGGCtcaatatcatttttttaactttc
aaaaataatcgacTGACTAGACTACAAATCTTTTGGATTGATCTAGCCTC
AGTTCTTAACAGACTTCCTGtaagaatttttctaaatttatcattttagt
TGGTATAACTAATCTTGTTCATTAAttagacaaaagaaaatttttagaat
ctcATTTTCTCACGTTGCAGAGAGAAAATTTGGTGATGTGGAACGTTTAA
CAACAGCTTGTCTATCAAACGGATTGACCGATAAATTGTTCGGTGGAACG
ACCACATCTTATAATAACCCTCTCGGTGCAAGTTATccaccaaccaaatc
aaattctCAACCCTCATCATCACAAAGTCAGAAAACTATCAGTAAGTTAG
CGTGATTCTGAAATTCTTTCAGTTAAAATTCGGAATGAGCTGTTAGTTTT
GGAAGCTTGTTGGAAAACTCTTGTCCTTGATATATTATGGGAACATCGAT
GTAACCATCCTATTTTCTTATGGACTCTCAAGGGGTCAGTCTATATTTTC
TTCCAACCatgttgaatttcttaataAGAAGTTTGCAAAGTACACGTCCT
TTATATCACTTTATTTcgctttcttaaatttttgatttgtttgtgaAATA
CCTTATTGTTTCATAACGCCGTCATTATTTTACCAGGTCAACAAGTTCCA
TCGAAAACTTTGTTAACCAACAAATCTTTAATCACCTCCACCAACCCAAA
GGAACAAGGGCGAACAGCACAAGCCAGCCTGAAAGCCATGAATGCTGCTC
AAAAGAAAGCCGAACAGCTAGGTATGtcttttgcttttgtttgattaact
tttgcgagattgacgttttgaattttttgcggAAATAAATCTTGACTTGT
CGCGCGAGGATGTTGAATCACGAAATCTAATCCGTATGCTGGTTTCAAAC
TCATTCGCAAAATAGATTTTGGTAGCTTTGTAAATCTCTCTTAGTTTTCC
AGGCAAACGTTAAATGGTTTGCATCAAGCTAGAATGGGAAAGTAATACTA
ATCAACAAAAGATAGGAAAAGCTGAGggaacttttttttgcttgctttAC
CATTCTCGTAATGTCTTGTTCGTATTTCTTCCTTACAGGGAACAGTTTAT
CGATGAGCGGTCTTCTCTCCTCTTCTTCAAACAAATCCACTTCATCTGCT
TCATCAACAAATTCTGCAACCTCAGCATCTTTCGTTGACGTCACCGGAAG
CTCCTccttcatgacgtcatcaagtgcATCGCAATCTCTGCATAAACAGA
ACGCGGCATCCGCGGCCGCCAATAGTCGTGTGCCCCAGAAAGGAAGAAGG
TTTGTTCATTTTCATATCAACAAAttttgtttcagtttttttgttgttta
aaaTACACACCACTTTCTCAGACCGCTGAAAATTTTACGACTGACGGGTA
TAAAGTTAAGGAGCTAAATCCCGATTGGATGAAACAACTCTTAATTCAAA
TGGGTGGTTAAAATTTCTCGATACTTTTGCAGATTGATTCTCTAATGTTT
AGGGATAAGTGTTCATTTCTCTAAGATGAAATATCGGGGTCTTTTTCTTA
CCTGAAATTATTTTACGGCGAATTCTTTCCAGTGGATTCACGTCTGCTAC
ACAGAAAGTGCTGATAGTTGTAGACCTTCCACTCTTGCTACGTGTAAAAA
GTACCACCAAAAACTGCTCAACATTTAAAATAAACTTACACCTGTCCTTT
TAACGGGTTTTCCATTTACATGTTCTTACTCTGGAAGAGTAAACACTTCT
TGggactttgcaatttttcattAATATACCACCGAAAGTATAAAAAGTAT
CatttaatttctattttctagGGGACATAAAGGAATTGCAGGTCAGGGTC
AAGATAAACCGTTCAACGAAAATGCTGCCATTGATTGGGTACCTGACCCC
AACGAGCCCACTTATTGTCTTTGTAACCAGGTAGATTATTTTAACTTAAT
ATTTATTCAACATTTTCTCCGCCGTCCACCATGACTTAGGTGTGATTTAG
TCACGATCACTAGAAGGTGACGATAAAATGTCCCCACCTACTCTCGAGTT
CCTGATAAACGTACAGTAACAAATAAACATACAGGGTTGAAAATGGAGGC
ATAAAAATCTAATTGAAGGGTCTTTTCAGGTTTAGGTTAGGGGGTAAATA
ATGGGTATTCTGCTTTCATTTGACGAATAGATAAAACCTTCATAGTCAAA
GAAGGGTATTTAGCCTCAGAAGTACAAGTAGGGacttgaaattgaggaaa
atctttgtcaaaattaataaacgtacatgtacgtttattaggcacccgag
agtatattcttgatattcatgacgtaatcttttatacaaaaacacccgaa
aaacaccgggcgtttTCCACCAGTTTTaaatttaaacaatgaaactgGTG
CAAACGCCCGCTGTTTTTCGTATGTTTCCGTATAAATGATGACgccatga
atatcaagaattaaaTCTAGTCGAGTCGAGGTGTTTAAATTGGAAACCTA
TAGAATTAGGGATTCATATACAATTTTCAAGTATcacttatctttttttt
ctcaaaggtCTCGTATGGCGAAATGGTTGGCTGTGACAACCCTTCCGTAA
GATTAATATTATTATGTACCCTAATATTTTTTGGTTTGTCCATTGTCGCG
GATATTGGGCTTTGTTATTCTACACCCACCCTGACATTCTGTTCGAGTTT
TTGCTTTCAAACTTGACTTCTGTCTTGAGTTCTCTTGACATCTTTACTTT
TTGCGTATAATAGCCCTCCAAACTATCGACGAACTTTCAaagattacatg
tttttttttataagcatacaaaaatccgaaaacaggctcagagatgctta
ggtcaaaagcttaataaggctgaaaatgcttgaggggatgcttaaatcta
aagcataaatttagggaaatactgaaaatccgtaaaattcctgccaaaaa
acccaaaatcaggaaaaaaacatttttcgtaggctcaagtaatgcttgcc
atatgcttaatttttccccatatctgagcctagatatgcttacaagtgca
atgcttataaaagaaaaaacatgtatgtagCTTTAAAATTGTGCTATTTA
CAGTAAGCTGTATGTCTCTATGCTTTATAAAGCAATGTATCgaacttatt
tttcattctCATTCTTAGTGTCCCATCGAGTGGTTCCATTACGGTTGCGT
TGGTTTAACGGATGCACCCAAAGGAAAATGGTATTGTCCGGACTGTTCCG
CTGTTATTAAGAAGAGAAGAATGCGGTGA Coding sequence (CDS) from alignment at sc0000001_pilon:3778972..3784250+ >XLOC_032569 ID=XLOC_032569|Name=XLOC_032569|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2442bp|location=Sequence derived from alignment at sc0000001_pilon:3778972..3784250+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTGTATCTAGAGGACTACATTGAATATGTTGTATCTAGAGGACTACA
TTGAATTAATTGAACAACTACCACAAGATCTGCGAGATCGTTTCACAGAT
ATGAGAGAACTGGATTTGAAAGTTCAAATAATTGAACAACTACCACAAGA
TCTGCGAGATCGTTTCACAGATATGAGAGAACTGGATTTGAAAGTTCAAA
ATAATATTGATACATTGGATTCAAGAGTGCGTCGTTTTTTCACGGAGGCT
CGCAAATCAAAGCCAGATCAAGTGGAAGAggattataaaaacattcatcA
AAGTTACAAACAAGCTTTGGATAATGCGGATGAGAAAGTCTCTATGGCAT
CACAAATATATGACCTGATAATATTGATACATTGGATTCAAGAGTGCGTC
GTTTTTTCACGGAGGCTCGCAAATCAAAGCCAGATCAAGTGGAAGAggat
tataaaaacattcatcAAAGTTACAAACAAGCTTTGGATAATGCGGATGA
GAAAGTCTCTATGGCATCACAAATATATGACCTGGTCGATCGACATTTAA
GAAAGCTTGATCAAGAACTCAGTCGTTTCAAAATGGAATTAGAAGCAGAT
TGTTCCGGCATCACAGAAATCCTTGAAAGAAGTCGATCGACATTTAAGAA
AGCTTGATCAAGAACTCAGTCGTTTCAAAATGGAATTAGAAGCAGATTGT
TCCGGCATCACAGAAATCCTTGAAAGAAgGTCAGTGGTTGGGGCTGAAGA
GCGCACATTGGACTTGCTTTACAATTCAACTTTCAGCAACACGACCGGAG
AACCTTTGAgGTCAGTGGTTGGGGCTGAAGAGCGCACATTGGACTTGCTT
TACAATTCAACTTTCAGCAACACGACCGGAGAACCTTTGAAGAGAAAATT
TGGTGATGTGGAACGTTTAACAACAGCTTGTCTATCAAACGGATTGACCG
ATAAATTGTTCGGTGGAACGACCACATCTTATAATAACCCTCTCGGTGCA
AGTTATccaccaaccaaatcaaattctCAACCCTCATCATCACAAAGTCA
GAAAACTATCAAGAGAAAATTTGGTGATGTGGAACGTTTAACAACAGCTT
GTCTATCAAACGGATTGACCGATAAATTGTTCGGTGGAACGACCACATCT
TATAATAACCCTCTCGGTGCAAGTTATccaccaaccaaatcaaattctCA
ACCCTCATCATCACAAAGTCAGAAAACTATCAGTCAACAAGTTCCATCGA
AAACTTTGTTAACCAACAAATCTTTAATCACCTCCACCAACCCAAAGGAA
CAAGGGCGAACAGCACAAGCCAGCCTGAAAGCCATGAATGCTGCTCAAAA
GAAAGCCGAACAGCTAGGTCAACAAGTTCCATCGAAAACTTTGTTAACCA
ACAAATCTTTAATCACCTCCACCAACCCAAAGGAACAAGGGCGAACAGCA
CAAGCCAGCCTGAAAGCCATGAATGCTGCTCAAAAGAAAGCCGAACAGCT
AGGGAACAGTTTATCGATGAGCGGTCTTCTCTCCTCTTCTTCAAACAAAT
CCACTTCATCTGCTTCATCAACAAATTCTGCAACCTCAGCATCTTTCGTT
GACGTCACCGGAAGCTCCTccttcatgacgtcatcaagtgcATCGCAATC
TCTGCATAAACAGAACGCGGCATCCGCGGCCGCCAATAGTCGTGTGCCCC
AGAAAGGAAGAAGGGAACAGTTTATCGATGAGCGGTCTTCTCTCCTCTTC
TTCAAACAAATCCACTTCATCTGCTTCATCAACAAATTCTGCAACCTCAG
CATCTTTCGTTGACGTCACCGGAAGCTCCTccttcatgacgtcatcaagt
gcATCGCAATCTCTGCATAAACAGAACGCGGCATCCGCGGCCGCCAATAG
TCGTGTGCCCCAGAAAGGAAGAAGGGGACATAAAGGAATTGCAGGTCAGG
GTCAAGATAAACCGTTCAACGAAAATGCTGCCATTGATTGGGTACCTGAC
CCCAACGAGCCCACTTATTGTCTTTGTAACCAGGGGACATAAAGGAATTG
CAGGTCAGGGTCAAGATAAACCGTTCAACGAAAATGCTGCCATTGATTGG
GTACCTGACCCCAACGAGCCCACTTATTGTCTTTGTAACCAGgtCTCGTA
TGGCGAAATGGTTGGCTGTGACAACCCTTCCgtCTCGTATGGCGAAATGG
TTGGCTGTGACAACCCTTCCTGTCCCATCGAGTGGTTCCATTACGGTTGC
GTTGGTTTAACGGATGCACCCAAAGGAAAATGGTATTGTCCGGACTGTTC
CGCTGTTATTAAGAAGAGAAGAATGCGGTGATGTCCCATCGAGTGGTTCC
ATTACGGTTGCGTTGGTTTAACGGATGCACCCAAAGGAAAATGGTATTGT
CCGGACTGTTCCGCTGTTATTAAGAAGAGAAGAATGCGGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001_pilon | genome | sc0000001_pilon:3778972..3784250 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1111-1221:5169 |
| Aaloc | 1072-1110:4558 |
| Aaloc | 964-1071:3823 |
| Aaloc | 754-960:3091 |
| Aaloc | 619-750:2639 |
| Aaloc | 448-615:2173 |
| Aaloc | 367-444:1758 |
| Aaloc | 268-363:1357 |
| Aaloc | 103-267:789 |
| Aaloc | 31-99:379 |
| Aaloc | 1-27:1 |
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