XLOC_032409.2 (mRNA) -

Overview
NameXLOC_032409.2
Unique NameXLOC_032409.2
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000066_pilon:1592505..1593161+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_032409.2 ID=XLOC_032409.2|Name=XLOC_032409.2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=657bp|location=Sequence derived from alignment at sc0000066_pilon:1592505..1593161+ (Clytia hemisphaerica_ch_hm2_pilon)
TTATCAAAACATAAGTTTTCTGAGATTAATGAGGAGGATTTAGACATCTT GTTGATAAGACTTGTTGAAGAATTCCCTCATTGTGGAGAGGTAATGCTAA GAGAATTATTAAAGGAAAGAAGCATCAAAATTACCAGACAAACTTTGCGA GACAGCTTGAACCGGATTGACGAAAATGGTAGTCTAAAGATGAGGAAGAA AAAGAGTTTACACCGTAGAGTTTACAGTGTACAGGGACCAAATCATTTGT GGCATCTGGATACAAACCATAAACTTGTAAGGTGGAATTTTATCATAACT GGTATAGTTGACGGTTTTAGTCGTTTACCTGTAGGTTTGTATTGCACCAA TAACAACAAGGCTTTAACTATTTTGAGTTGCTTTCAAGCTTCTGTTGAAG AGTATGGTTTGCCCAGCAGAGTGCGTGCGGACAAAgggaaagaaaatgtt ttggtgGCTGATTATATGATCGAGAGAAGAGGGGTTGGTAGGAAAAGTAT GATTACTGGAAAGAGTACTCATAATCAGAGAGTTGAAAGATTGTGGCGCG ATGTGTATACTGGTGTTCTCTCTtatttttctaacattttcaCTTACTTA GAGGATCAAGATGTCTTAGATTCAACTAATATCCTGCATCTCACTGCATT ACATCAT

Coding sequence (CDS) from alignment at sc0000066_pilon:1592505..1593161+

>XLOC_032409.2 ID=XLOC_032409.2|Name=XLOC_032409.2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1314bp|location=Sequence derived from alignment at sc0000066_pilon:1592505..1593161+ (Clytia hemisphaerica_ch_hm2_pilon)
TTATCAAAACATAAGTTTTCTGAGATTAATGAGGAGGATTTAGACATCTT
GTTGATAAGACTTGTTGAAGAATTCCCTCATTGTGGAGAGGTAATGCTAA
GAGAATTATTAAAGGAAAGAAGCATCAAAATTACCAGACAAACTTTGCGA
GACAGCTTGAACCGGATTGACGAAAATGGTAGTCTAAAGATGAGGAAGAA
AAAGAGTTTACACCGTAGAGTTTACAGTGTACAGGGACCAAATCATTTGT
GGCATCTGGATACAAACCATAAACTTGTAAGGTGGAATTTTATCATAACT
GGTATAGTTGACGGTTTTAGTCGTTTACCTGTAGGTTTGTATTGCACCAA
TAACAACAAGGCTTTAACTATTTTGAGTTGCTTTCAAGCTTCTGTTGAAG
AGTATGGTTTGCCCAGCAGAGTGCGTGCGGACAAAgggaaagaaaatgtt
ttggtgGCTGATTATATGATCGAGAGAAGAGGGGTTGGTAGGAAAAGTAT
GATTACTGGAAAGAGTACTCATAATCAGAGAGTTGAAAGATTGTGGCGCG
ATGTGTATACTGGTGTTCTCTCTtatttttctaacattttcaCTTACTTA
GAGGATCAAGATGTCTTAGATTCAACTAATATCCTGCATCTCACTGCATT
ACATCATTTATCAAAACATAAGTTTTCTGAGATTAATGAGGAGGATTTAG
ACATCTTGTTGATAAGACTTGTTGAAGAATTCCCTCATTGTGGAGAGGTA
ATGCTAAGAGAATTATTAAAGGAAAGAAGCATCAAAATTACCAGACAAAC
TTTGCGAGACAGCTTGAACCGGATTGACGAAAATGGTAGTCTAAAGATGA
GGAAGAAAAAGAGTTTACACCGTAGAGTTTACAGTGTACAGGGACCAAAT
CATTTGTGGCATCTGGATACAAACCATAAACTTGTAAGGTGGAATTTTAT
CATAACTGGTATAGTTGACGGTTTTAGTCGTTTACCTGTAGGTTTGTATT
GCACCAATAACAACAAGGCTTTAACTATTTTGAGTTGCTTTCAAGCTTCT
GTTGAAGAGTATGGTTTGCCCAGCAGAGTGCGTGCGGACAAAgggaaaga
aaatgttttggtgGCTGATTATATGATCGAGAGAAGAGGGGTTGGTAGGA
AAAGTATGATTACTGGAAAGAGTACTCATAATCAGAGAGTTGAAAGATTG
TGGCGCGATGTGTATACTGGTGTTCTCTCTtatttttctaacattttcaC
TTACTTAGAGGATCAAGATGTCTTAGATTCAACTAATATCCTGCATCTCA
CTGCATTACATCAT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_032409.2XLOC_032409.2-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000066_pilongenomesc0000066_pilon:1592505..1593161 +
Properties
Property NameValue
Aaloc49-654:52
Aaloc1-48:1