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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000297_pilon:271098..276127- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_032355 ID=XLOC_032355|Name=XLOC_032355|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5030bp|location=Sequence derived from alignment at sc0000297_pilon:271098..276127- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGACATAGAAGGATTTGATGGTAAAAGTGTCGAAGAAGTTACCAACTG
GCTAACGATGAAGTTTAATCCAGCTATGGCTCAAAAGTTCAATGGTATAT
CAAGCTAAATTTATATTTCATTTATCTATTAGTTCCTTAGCTTATCTTGA
TTCTTTTAATAAAGATTTTCTTTGACACACATGACACACAATTTGCGTCT
AAAAGCGAAGTGAGATATTTTTAGCAAGAAGGAAGATTGGATCCCTTCCT
GTTTTGTGTTTATGCATCAGGCTGATGGAGACTTGATCCCCTCATGTCTT
GATGTTTATGATCTCATGAGCGCCGCATTTGGAATATTAATCACTTGTGC
TTGCGAAACTCAGCTAAAGGGAAAATTTAGAGATAGGAATATACTTGTTA
CATGGGCGTAGCTATAGCACAGCTTCTCAAGCTCAAGTGGTGATTTAAAA
AGTTCGGCCGCATGTCTGACTGAAACTAGGATGGACGTAAGTCCCGACTT
TTCACTGTTGAGTTATGAGGGTATATTCTTTCCATAGATCAGATTCTTTG
AATAAAGACAAGCTTTTCTCTTGTGCTATTTTTGACAGTCAATGTTTGTT
GACATACTGCAATTGATGGAATTTCCTGACCGACACATATGTGTTTGCAT
GGGCATTAAGGAAAACATTGTTTAGGGATCAAGGGTGATTTTTTACCGTT
GATTCATAGCTTCTACCCCCCCTACATTTAGTGGGGGTCTTGGGTTTTGA
GGAACCAAAAGCAAAGGGGTGTTAAAAGTATGACTTTCCTAGGGGGTTGC
CAGTTAAGGGGGGGGGGTCTTCTTACCTAAGGGGGGTCTTCCTTGAATTA
TGCGAAATTTCAATCATTTTATTTATACTGATTTTCTAAGGGGGGCTGTG
AAATTTTAAATGAATTTCCTAAGGGGGTTAGCACTTAAGGGTAAGGGGGT
TAGCACTTAAGGGGGGGGTCTTGACCCCTCTAGAAACTGTGTGATTGTGT
ATAGATTGGAAATGATGGATGGTAAAAGAGGATTACTGTCTACACATCTT
GATAGAATTGTATGCCTAGTTTGGATTGAATGATATACCTTGGGGATTAA
TATTTGTGGGAATTTATTTAAATTTGCTTCTTAATTAGCATTGGTTATAC
CTGATGATACCTGAGGTACCTTGAGCTCCCCCAATAAATGTCTGTACATC
CTGGGTGTGGAGATATGGTCTAAGGGTAGGAAAATGGTCAAAATTGGAGG
GGGGTTTTTACTCTTTTATAGAGCAGATTTGCCAATAGTTTAGTACTCTG
GCGCTGGCTCAAAGTCTTGACAGGTTGTGATATTCTTTTATTCTAAATGG
AAGGTTCAAGCATAGCCTGGATATCCGAGCTCAAAATTTTAGAAAAAATA
AGTTTTACCTCAGCCAGACAAAGTTCTAAAATTATAGAGCTTGGTTCACC
TAGAAATCAGGTGAACCCCTGTTGAGAGATTTTCCTGCATGAATCCCATG
GCTGCAAATAAATATATGCACATAATGACATGCATAATTTCAAGATGGTA
CCCCAGCAGTGATAAATCAATTTAGAATGGCAGCCTTTACCATAAAATAT
AGACAGTGTGGTGGAAAGTCTGTTTAGACAAAAAGTGCAAAGTGAATTTT
GGAGAAATCTTTTTTTCAAAATCCAACCCAAAACAGCAATACAAAATTGC
CAAACAAAAAAGAAGAATTGAAGCAAAATAAAGATATACCTTTGGTTTTT
TACACGATGCAACCAAGTCATTAAGAAGATTAAAACAAGAATATCTAAGC
AAGTAATTGAAAAGAAAACAACCAGGACATCTAAAAATTCCCATTTTTGA
TCTTCCCACTTCTTCCCTACCATTATTGTTATTTGGATGCGTAGTCAAAC
ACCCAAGTGAGATAATTAGATATTCTATTGTTATTTGCTTCGAAGAAGAA
AAGTCAGGGAGATTTGCAAAGCAGCGTATGTGCCTTGCTGATCGCCCGCG
CGGTCCACCTAAATATTTAGGCGTACTCGCATAATTTCTTATACGCGCGC
CACCATTAAGATCTCTGATTCGCTTGGACCAACCAATCAGAATATCCGCA
TAATCATCCTCAGAAGTTTTCACAGTTTTTATTTGACGTCAACTAGATCA
GACGCTTTTGCAACGCTCTTCGAAAAAATGGCTGAAAACAAATAAAAACA
TCAAAAGTTCATGAAAATAACATCAAAATGGATAAAGATCAGCCTTTCGA
AGCAGCCTCACCACCTCAAGCTTGCACGCCGTCAAGATGTACTGAAAACG
AAGACCTGGATCGCTTAACATGCAAAAAATGTAAAAGGTCAGTTCATTAT
GAGTGCACACAGTTACCCCTGTATCAACTACAAATATTCGTGACATTTTA
CAACGATCATTACTTATGTTCAAACTGCGTACGAATAACGAAAAACCTAA
GAAATAAAGTGGGAAAAAACACTCAACATATGATGCAAAATGAACTTAAA
AAGAAAGACGACGTCATACAAAAACTGAACAATGAGGTCAACACCAACAC
AAAAACCCGTGATTCCATCAAAAATGACCTCAAAACCTTTTTGGCAGGAA
AACTACAAGAGATGGAGGAAAAGACAAGAAGCATGATAAAGGAGGAAATA
AAGCACACAGCAGAAATAATGACGGAAACATCAAAGAAAACATACACCGA
GATTACCAAGAAGCAAAAAGAAGATATAAAATCTGCCGAAGAACAAAAAC
GGAAGGAAGAAAGTGAAAGGAGAGACATAGAATCTAGAAAACTGAATATG
ATCGTTCACGGGTTTCTCGAATATTCAGGCCCAGATAAGGAAAAAGAAGA
AAATGGGAAAAATTATGACATATTTCGGTTCCGAGAACTCCTAGATGACA
TCAATGTTCCAGAAATCAATGTTACTCACCACAGATTAGGAGACAAAAAA
CTAAGAATGGCCGTCCTCTGAAAGTCACCCTGCAAAGTCAACATGACAAA
GATCTTATCATGAAGAATTTACACATGCTAAAAGAAACTTGTTTCTTTCA
GGTAAGTATAACGGAAGATTTCACAATCAACGAACGGAAAAAGATCAAGG
AGATGCACGAAGAAGCAAAGAAACTCAACAAAAACAATAACAATAAAGGA
TTCAACTGGTGCGTAAGAGGAAGCCCAAGAACAAAGCTACGCTTCGTTAA
AAAATTACAAAACCAAACAAAAATATTTTCAAATTACAAACCAAAATGCT
CTACAGAAGAAATTGTCAGTGATTGGGCATTAACAGATGATGATGAATGA
TTTATTTTGTAAAATAGGCAGTCGAACTCTATTAGCTTTAAAGCTAGTAC
AGATTTGTACACATTTTTCGACTTTAAAGAATATATACATTAACATTAGA
TGAGAATGCAGACAATCTAGGTAAACCAGACCGTAAACATAAGAAATATC
AAAATCAAAAAGAAGTTTACGGGCTGGATATCCAGGCTAGCTCAAGCAAC
GCACTCTGAACTTATCTCATTGATAAGAATCATTTCAATCTCCTTTTCAT
TTTACCATATTAACCCAGTTATTGACTTTTACATCTTTTTCGCCTGGGTG
ACTTGCAGAAAAATAGTACAATGTCCCATCTGGGAACTAGAGGACCCCCA
TTTTTGTTTTGTTGTGACATATTAAATGGTTTCTTGAGTTAAAGACATTT
ATTGCCTTTAAATGATCTATTTTGAATTTTTTAATTGGTAAAAACTAATA
CGGTCCAAAAATTTGTCCCGTCCGCAACGGCACAAAAGTCTTAATTTCTC
TTTTTTTGAGACAAATTTAATGTTCTAACTGTATCAAGCCAATGAACTAT
AGGGAACCACATGCTTTTTGCAGCAGTATCATTTTTCTTGACTTTACATG
TACCGGCTATGAGTGAAAAACTTTTTGTCCTGTCCGCAACAAAGTGTCTC
GTCCGTAACATTTTTCTCAAGATTAGGGCTGTAACAAAAAAAAATCTATA
ACAATCCAAAGAAGGCTATTTAGTAGGGTTCACAAAAATGTGAAGTTCTT
AGAAATTGCATTTGCCAAAGTTGAGTTATAGGTCCTCAAAAAGTGCCTGA
TGCTGACGCAACATTTTTAATTTCATTTTTCATATCCTCTGGCAGTAAGG
ATAACAAAAATGCAAGCTGGAAAATGTTTTTGATAAATTATCAAACAGTA
AAGTTGATCATCTTTTTAAAAGCCTTATTTTCCGTTCACATTTTCAAAGA
AAACCTCCTCTTGAAAGATTTGGGTATATATCTTTTATATCAGAAAAAAT
GACTGTTTAAAAGCTTGCCCTTATCAAGATTGATCAGAAACAACAAGATT
TGATATGACTACATACCCCTAGAGATTTCTCCAAAGCCTCAAAGTTGGAA
AATTGACAAATCAAAAAGTGGGCCACATAACCAGACCAATACTTATTTAT
AAGCTGCTTTCTTTTTCAGTTAATGGTATTGATGGTGATAATCTCAAGGA
GATCATCACTTGTAAGGAACATCAATTCCGAATGCTTGAGATGGCTGGCA
TAAGCCTAAAGGAAATTTTGGCATTCAGAAAAGCATTTAAAAGTCATCAA
CCTCAGTCCACCAATGAATCAAACCCATCTACACCAGATTTGCAAACAAT
GGAAGATTTTTTTAATAAAAACCAGTGAGTCAATTTTCCTTATGTAGGTA
CATTTATAAAAGTGCCTTACCTATGCTAAAGGAATAATTTTTTGTTGTTA
TTTAAAGAATTTACAAATACATAAAAACAGCTATCAAAAACCTAAACGTT
CTACCATATAAAAATATGTTAATGGGTTTACTACAGTTTAATGTGAATTT
AGACTTTTTGCAGAGTATTCAAGTTTGACCTGGTAATAAGGAGAACAATA
CTTTTGTGTTTATTTGATTTGCGAATTACTTTAAATTTTCAGACGTTCCG
TCATATGTAGCGAATCAAAACGGTACTGGCCAAAAGGACCTCTACCAACA
TTCACCACACCTGAAGACGGGGTGAGTTGA Coding sequence (CDS) from alignment at sc0000297_pilon:271098..276127- >XLOC_032355 ID=XLOC_032355|Name=XLOC_032355|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=774bp|location=Sequence derived from alignment at sc0000297_pilon:271098..276127- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGACATAGAAGGATTTGATGGTAAAAGTGTCGAAGAAGTTACCAACTG
GCTAACGATGAAGTTTAATCCAGCTATGGCTCAAAAGTTCAATGATGGAC
ATAGAAGGATTTGATGGTAAAAGTGTCGAAGAAGTTACCAACTGGCTAAC
GATGAAGTTTAATCCAGCTATGGCTCAAAAGTTCAATGTTAATGGTATTG
ATGGTGATAATCTCAAGGAGATCATCACTTGTAAGGAACATCAATTCCGA
ATGCTTGAGATGGCTGGCATAAGCCTAAAGGAAATTTTGGCATTCAGAAA
AGCATTTAAAAGTCATCAACCTCAGTCCACCAATGAATCAAACCCATCTA
CACCAGATTTGCAAACAATGGAAGATTTTTTTAATAAAAACCATTAATGG
TATTGATGGTGATAATCTCAAGGAGATCATCACTTGTAAGGAACATCAAT
TCCGAATGCTTGAGATGGCTGGCATAAGCCTAAAGGAAATTTTGGCATTC
AGAAAAGCATTTAAAAGTCATCAACCTCAGTCCACCAATGAATCAAACCC
ATCTACACCAGATTTGCAAACAATGGAAGATTTTTTTAATAAAAACCAAC
GTTCCGTCATATGTAGCGAATCAAAACGGTACTGGCCAAAAGGACCTCTA
CCAACATTCACCACACCTGAAGACGGGGTGAGTTGAACGTTCCGTCATAT
GTAGCGAATCAAAACGGTACTGGCCAAAAGGACCTCTACCAACATTCACC
ACACCTGAAGACGGGGTGAGTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000297_pilon | genome | sc0000297_pilon:271098..276127 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 301-387:88 |
| Aaloc | 97-297:560 |
| Aaloc | 1-93:5031 |
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