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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000168_pilon:278896..283649+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_032196 ID=XLOC_032196|Name=XLOC_032196|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4754bp|location=Sequence derived from alignment at sc0000168_pilon:278896..283649+ (Clytia hemisphaerica_ch_hm2_pilon)
TTTAGATCATTTATTATCGTCAGAAAAATGGTGGGATTGGCAATTTTTCT
TGATATTCTATGTCTTCACTTGTCTTTTGGACAATTTATGCCATTTCTAC
CATTCAAACACCTCCATACAAACACTGCTATCGATGGTCCCCAACCATGG
TTTGACGGAGAAGTAGCTTCCAAGGATCATTGCTTCGATAAATGCCTCAA
AAACTTCactcattgtgaatatgtacaACATAAACAAATGACCACAACAA
CATGGCTTTGCAGGCTTTTCAATGTCATCTCTGGTCTGTCAAATTATTTG
GTTTCACAAACCGGAGAAATGTTGGCTCAAGCTGTCCACGAAAATATTGG
CTGTGAAGATTGGAGATCTAGAGGACACACACAGTCGGGTATTTACTGGA
TTTTCTACAACAGAAATAAGTTCAAAGTATTTTGCAACTTTGCTGGTCCA
GATTCGTGGACATTGATAGACAAACGTCAAGATGGTTCGGTCAGTTTCAA
TCGTTTATGGCAAGAATACAAAGACGGTTTCGGAGATCTGAGCGGTGAAT
TTTATTTGGGTAATGAAAAAATCCATCTCTTAACAAAAGACCGTGAAATG
ATGGTTTATCTGCAACTTTGGGCTTTTGATGGTACAAAGTATGCAGTCGG
GTTTAAAGGCTTCTTTATCGAAGATGAAGCTAATAAATATAGGTTATGCT
CAGGTACATATGATTTCGGTGACCCAAACTTCGGGACGAATGGACTGACA
TGAAGGAAGTAAATTTTCAACCCGAGACGATGACAATGACATAACCACAA
ATATCCATTGTGGAGATAAATGGAAAACAGGCTGGTGGTTTAAGAGTTGT
GGAGGTTGTTATCTCCATAATGTTTATTCCAGTGTACCCGACGTACCGAA
ACGACATGGAATTACTTGCGGAAGATTGAGAGGTGACTTTGAAAGCTTCA
AAAAACTCGTGATCTATTTCGACCCGTTGGCTAATTTTATTGATCTATTT
TATTCGCCAGATTTCATTAGTTTTCAATCCTCATAAATTTCTAATCAATA
CGGACCCTCTGAAGCGGAAATTTTCGCACGTGAGTATATTAGCTCTCaaa
agaatcgcaaaattgcgactattttcttaaaatgggTCATTGTTGTATTA
GCAAGTACTTCGCTAAGAATGCCCTCAGAGTtcttaacaaatatttcctt
ttggaaaggaaatatttagcgGGCGGATtgtatcgaaaaaaaaattttta
aagcacTTATTAGTCATTATTAATTCTAAATTTCCAGTTTTCACGTGAcc
ctttaaaaaatcaattcttatatttttttatttgttaaaaactttGTTGG
GAAAGCTGGAGTTTTTTACAAGTCTTATTATTGGTTGTCTTACGATGTAA
TAAAATAATCTATTATTTTTGAATCTCTTCACTTTCGACCTTAGTGAAAT
CTTATAAAATCCGCTCATCCAAATTTTTGCGTTTTAATAATGGCTAGTGT
GCAGATAAGTAACccaattttatttttggatGCAATTtcaaattggagct
ccgagatttTCTAAAAGGTTTAATTCACACTAACCCCTCCCGATGGTTAA
TTGAGTTCGAAGCCAATATTCAATCAACTATATTGGGCTGTCGGATTCGC
AAAATAGAAACGTTTTTCGGTACTAAATATTTCTGGAGCGAGAATTTTTT
AGCATCTTCAAAAAATGTAACGTTATAGTAATCCGTTGTTTAACTGTTTG
CACGTTTTCTTCAATTCAAGTCTATTAGttcaaaatcgatttttcatgca
tgaatgtaaacattgcaaattttcttaaaagaaacaattaaaagacgtgt
ccaaaacaaactgaaaaaattgaaacaatccTGTTTgaatgtgacatttg
ttttgttttgttatccCGCTGCAAACGTTTTTTAAAATTTCGTcatactt
ttatgtccctttaaaaagcAACGTTGTCAATGTAACGacagaaaaatgtt
tgaaatcccatcccagctggcactcAACGTtgttttcaacgtttatctaa
tgttcataacgtccatataacgttagatgaacgttgaaacaacgttgagt
GCCAGCTTAACCTCCAAGCAGTTCTTCGTGCTCCACGCATTCCACGCATG
CGCTCTAAGGGGAATGGTTCTGCAAGAAGACCTGCGAAGGTTCTCGGGTT
TTCTTTGATGGCCgacactctgaaatttcagagtactTTTCACGATTCAA
TCGCGACATTCGCATAAAATTTATCGATTTGCTCGGGCCGTCTTTGGATG
CGTGGGCTAAACAAAACCGATTCTACTGCGACCGTGGCTTTCTTTCTCCG
AaccaaatccaagatggcgcctgAAATTCACGTTTTGGCTCttggtcaat
gttttgatttttttatggattttgagacttatgaaggaaaattcaatgtt
tcaaatgttGTTTATTCATTTTAGTGTAGCTCTGACATACACCCACAGAA
GTGGCTGCTCATACTTATTGACCTAAAAGCTTTGAAagactgttttgaaa
gttgtattGATTGTACACTGATTTTGCTtggatgttttctcatttttgtt
caaGATGAAGGCTCAAACACCAACCAAATTATTACAGGTATGTTCTCTTA
TGTAATGATTACTTTTCTCTTGCTATCTGCTTGATTATTAGGAGGAATGA
AGCATTTTATCAGAATAATGATAACTTAACGTGTGCGAAATGTCTGTCAG
ACATTCAACcgacaaaaaattgattcaaacACCAAGAGGTTGACTATTTT
AGGCTCTATATGTATTGTTGGATATTTGGATACTCTAATTCttggaaaat
attcaatatttcaaaagatacaGAGTATTTTGCTACtcagttcttacaaa
aaattgtttcctataaaatgataaataaatcttgaaaactGGGCCAATCG
GATACCGGTATCTGGTCACGTGTCATAGTTTTTCCCAGACCCCGACGAAC
GCGGTTTTGTAAAATTCCGCTGAATaaacttttcagatcatcatATGCCC
TAGCAATGGTGATAGGTTATGAGATTAGTGCCAGCTGGGATTTCATATTC
ATACAGCACAGGGAGTGATTGGACATTTAAAGGAGATATTCAGAGAAGAA
TTTCCGGGGGTCAGGGAAGTTAATAATTTTTCGCAAGAGTTTgatttaaa
ttgattttattaaaattcaaaggAGTACTACCAGAAGATAAATTTCCAAG
AGTTTCCAAGAATCTGAAACCTTTTCCAGGGTGCTAAATGTTATTATAAA
ATTTTCAGGGCGTAAATGAAAGGTTCATCTACCCCGCcccctgttttgtt
ttgttttgttaaaacAACACCCAAACCCCATCAATCAAAGTAATATCAAA
TAGAAAAACCTTCATGATAAATAAACTCAAACCGATTCATGATTTGAACT
AGTAAATGACTTTAATTCATTATTTAGTAAGATTTACCATGACAGCAAAA
ATGTTATTACAAAATTTTCAGGGCGTAAATGAAAGGTTCATCTACCCCAC
cccctgttttgtttttgttaaaacAACACCCAAACCCCATCAATCAAAGT
ATAGAAAAACCTTCATgatcaataaaattcaaatctgAACTAGTATTGAA
CTAGTAAATGACTTTAATTCATTATTTAGTAGGACTTACCATGACagcaa
aattgaatgaaaattgtaaaaaaaggagaaaaaaatccccatcagaaatt
aattttagtatcaaaaatttctaatttctaaaTGCATAAAGATGGATGCT
TCTGTACTTTGGTTTGGCCTCCTTTTATGTGTTCATTTCTCATTTGGGCA
ATTTATGCCATTTCTACCATTCAAACATCTCCATACAAACACTGCTATCG
ATGGACCTCAACCATGGTTTGACGGAGAAGTAGCTTCCAAGGATCATTGC
TTCGATAAATGCCTCAAAAACTTCACTCACTGTGAATATGTACAACATAA
ACAAATGACCACTACAACATGGCTTTGCAGGCTTTTCAATGTCATCTCTG
GTCTGTCAAATTATTTGGTTTCACAAACCGGAGAAATGCTGGCTCAAGCT
GTCCACGAAAACATTGGCTGTGAAGATTGGAGATCTAGAGGTTATACAAA
GTCGGATATTTACTGGATTTTCTACAACAGAAATAAGTTCAAAGTATATT
GTGGCTTAGGCGGTCCAGATTCGTGGACATTGATAGACAAACGACAAGAT
GGTTCGGTCAGTTTCAATCGTTTATGGCAAGAATACAAAGACGGTTTCGG
AGATCTGAGCGGTGAATTTTATTTGGGTAATGAAAAAATCCATCTCTTAA
CAAAAGACCGTGAAATGATGGTTTATCTGCAACTTTGGGCTTTTGATGGT
ACAAAGTATGCAGTCGGGTTTAAAGGCTTCTTTATCGAAGATGAAGCTAA
TAAATATAGGTTACACTCAGGTACATATGATTTCGGTGACCCAAACTTCG
GGAGCGAATGGACTGACATGAACGGAAGTAAATTTTCAACCCGAGACGAC
GACAATGACAGAGCCACAACAATGCATTGTGGAGATAAATGGAAAACAGG
TTGGTGGTTTACGAATTGTGGAGGTTGTTATCTCCATAATGTTTATTCTG
GTGTACCCGACGTACCGAAACGACACGGAATTACTTGCGGAAGATTGAGA
GGTGACtttgaaagcttcaaaaaactCGTGATATCTATTCGACCCGTTGG
Ctaa Coding sequence (CDS) from alignment at sc0000168_pilon:278896..283649+ >XLOC_032196 ID=XLOC_032196|Name=XLOC_032196|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1974bp|location=Sequence derived from alignment at sc0000168_pilon:278896..283649+ (Clytia hemisphaerica_ch_hm2_pilon)
TTTAGATCATTTATTATCGTCAGAAAAATGGTGGGATTGGCAATTTTTCT
TGATATTCTATGTCTTCACTTGTCTTTTGGACAATTTATGCCATTTCTAC
CATTCAAACACCTCCATACAAACACTGCTATCGATGGTCCCCAACCATGG
TTTGACGGAGAAGTAGCTTCCAAGGATCATTGCTTCGATAAATGCCTCAA
AAACTTCactcattgtgaatatgtacaACATAAACAAATGACCACAACAA
CATGGCTTTGCAGGCTTTTCAATGTCATCTCTGGTCTGTCAAATTATTTG
GTTTCACAAACCGGAGAAATGTTGGCTCAAGCTGTCCACGAAAATATTGG
CTGTGAAGATTGGAGATCTAGAGGACACACACAGTCGGGTATTTACTGGA
TTTTCTACAACAGAAATAAGTTCAAAGTATTTTGCAACTTTGCTGGTCCA
GTTTAGATCATTTATTATCGTCAGAAAAATGGTGGGATTGGCAATTTTTC
TTGATATTCTATGTCTTCACTTGTCTTTTGGACAATTTATGCCATTTCTA
CCATTCAAACACCTCCATACAAACACTGCTATCGATGGTCCCCAACCATG
GTTTGACGGAGAAGTAGCTTCCAAGGATCATTGCTTCGATAAATGCCTCA
AAAACTTCactcattgtgaatatgtacaACATAAACAAATGACCACAACA
ACATGGCTTTGCAGGCTTTTCAATGTCATCTCTGGTCTGTCAAATTATTT
GGTTTCACAAACCGGAGAAATGTTGGCTCAAGCTGTCCACGAAAATATTG
GCTGTGAAGATTGGAGATCTAGAGGACACACACAGTCGGGTATTTACTGG
ATTTTCTACAACAGAAATAAGTTCAAAGTATTTTGCAACTTTGCTGGTCC
AGATTCGTGGACATTGATAGACAAACGACAAGATGGTTCGGTCAGTTTCA
ATCGTTTATGGCAAGAATACAAAGACGGTTTCGGAGATCTGAGCGGTGAA
TTTTATTTGGGTAATGAAAAAATCCATCTCTTAACAAAAGACCGTGAAAT
GATGGTTTATCTGCAACTTTGGGCTTTTGATGGTACAAAGTATGCAGTCG
GGTTTAAAGGCTTCTTTATCGAAGATGAAGCTAATAAATATAGGTTACAC
TCAGGTACATATGATTTCGGTGACCCAAACTTCGGGAGCGAATGGACTGA
CATGAACGGAAGTAAATTTTCAACCCGAGACGACGACAATGACAGAGCCA
CAACAATGCATTGTGGAGATAAATGGAAAACAGGTTGGTGGTTTACGAAT
TGTGGAGGTTGTTATCTCCATAATGTTTATTCTGGTGTACCCGACGTACC
GAAACGACACGGAATTACTTGCGGAAGATTGAGAGGTGACtttgaaagct
tcaaaaaactCGTGATATCTATTCGACCCGTTGGCtaaATTCGTGGACAT
TGATAGACAAACGACAAGATGGTTCGGTCAGTTTCAATCGTTTATGGCAA
GAATACAAAGACGGTTTCGGAGATCTGAGCGGTGAATTTTATTTGGGTAA
TGAAAAAATCCATCTCTTAACAAAAGACCGTGAAATGATGGTTTATCTGC
AACTTTGGGCTTTTGATGGTACAAAGTATGCAGTCGGGTTTAAAGGCTTC
TTTATCGAAGATGAAGCTAATAAATATAGGTTACACTCAGGTACATATGA
TTTCGGTGACCCAAACTTCGGGAGCGAATGGACTGACATGAACGGAAGTA
AATTTTCAACCCGAGACGACGACAATGACAGAGCCACAACAATGCATTGT
GGAGATAAATGGAAAACAGGTTGGTGGTTTACGAATTGTGGAGGTTGTTA
TCTCCATAATGTTTATTCTGGTGTACCCGACGTACCGAAACGACACGGAA
TTACTTGCGGAAGATTGAGAGGTGACtttgaaagcttcaaaaaactCGTG
ATATCTATTCGACCCGTTGGCtaa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000168_pilon | genome | sc0000168_pilon:278896..283649 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 454-987:4221 |
| Aaloc | 1-450:1 |
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