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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000228_pilon:481165..485914- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_032194 ID=XLOC_032194|Name=XLOC_032194|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4750bp|location=Sequence derived from alignment at sc0000228_pilon:481165..485914- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGTTGTTGGTTGTATTACTTGTTGGGTTGGTTGCATGTAAGTTTTC
TATTTCTTCCCTTTTTGAAGAACTCGTTGTTTCATTTTATATAGAGTGTT
TCTCGAGATCTGTCTTAGCATATCTTTATTAAATCCGGCGGGTCTATATT
GTATGATATATCGAATGATACCGTGACAACAAATTATAAGTATTTGAAAA
TTTCTATCTTATGTGATAGGGTACTGTACCACAAAAGTAACGCTCTCTGT
TATCAATTTTGAGTACAAGTTTTTTATTATAAGAGCATCCATAATTTTTG
AAACCTACGCTTCGAATGTTCTTAACTTTTTCAGATTGAAGCCTAAAAAT
GCCCAACATGTTCTTGTTTCACAATTTTGTAGGTAATTTTGTGCGTTTTT
CTAAGAAATCGGGTGTTTTAGAGTCCACAAAGCCTTAAAATGTTCTTAAC
TTGTTCTTAACACTTTGGCCATCGAAGCCTTATGTTCTTGTATAGTTTAT
AAACGTACCTTCTAGAAACCCCCGTTATTATATTCAACCTTTTCAGATGC
AACAGCACATAACATTGTGGGAAATGTCAACCATAACAACAAACATAAAG
CTACAAGTGATGCTTGTACCACCTTCTCCGAATTCGCTCTTGTTTTGGAC
GAATCAAAATCCATTCAACCAGACGATTGGAAAGATGTGAAAAATTTCGC
CAGCGAAATTGTCCAAAAAGTTGGCATATCTACATATGGTAACAGAGCCG
GTATCGCATCGTTCTCTGATAGGGCGAGAATCAGAATCACTTGCAAACAA
CACGATAACACCAAAGACTTCATCCAAGCTATTAATGCTTTTGAACGTAA
AGGAACTTACACGAATATGGAAGATGGCTTGATTAAAGGTATGTTACTTT
TATAGTTGTTTATTGGACATTGAAACGGGTTAAAGGCCACTAATTATAGA
TTCGGTTTACATAAATAGCCCAGTAATCTAGAACTTATAGATAGTTATAA
ACCTGACAGCGTCATCGAACTAGATCCGGCTTTCGGAGGGAGCCTTTGAG
TCTAGAAATGTGTCGTGAGACGCCTTCTCTGCACAATCGAACGAGTGAAA
AAACGATAAGGGTATTCGATTGTTTTCAAGGCAAGCCAGCTCGGCTATGT
AAGAACTTAACAGCGAAGGAGCGAAGGGAACCCATCGCGAAGGAGCGAGG
ATTCAAGTTGTTAGCCGTAGTTTGAGGCCCTACGCATTGACCATTCGACC
ATCGATCAGTTATGATAAAATAGTGCAATACAGTAGCGTAGACAAAATGG
GCGCAAAATTTGTGTAGGAGAGCAGACTTTTGTGACACAGTAATTATCTA
TTCATATTATAAAGAGATAATTTCTGTGTCATGAAAATCTCCTCTCCTAC
ACAGATTTCGCGACCTGCAATGAGGAGCGTAGAACAATTGGGACGGGTTG
GCTTGGGCGGTCGGTCGGTAATGTAAGTAGATAATAACTAGGTTAGCACT
TATCTGTATTGAAATGAAAGTTCTTTTAAAGAGAGACATGGGAAGAAGTT
CAGCAGACCAAAATATGAGAAAGGAGTTAACCTTATCATCATTACAAGAT
GCTTAATGAGCTAATTACAGACTGAAGAGTAATTATCCAGTGGGAAATAA
AGCATCGTTAATCACCCTTAGAAATAAGGCTATAATTATAATTTATGACA
AACGGGAAAACATCTACTTCCTATTTAAAAAACACCTATATTGAATCAGC
GAAGATCAAATAACTTTAGATAAGTTGCTCATAGTTACAATAATTCTCAC
ATGAAAAGCCCGTTACTATACCACAGCTTCTACCACTCTTCTACCAACCT
TTGCAAGTTTAACCCATTTTAACATAGAAAAATTGTACAGTTGACGCTCT
CTAATTCGACATTCCATTATTCGATAATATTAAAATCCACCGTCAAGGAG
AAACTCTCATAAGCGATGCTCTACCATTTCAGATTCTCCTTGAAAATCGA
ATTGGTGAAGGACAAATGTATGTCCCATGACGTCAAGTTTTGTCGAGTTT
TGTTGATAATTACATAACTAGGCCTGAGAAGATGTTTTAATATTTCAAAT
TATGACGTTTTAGGACAAAGACTTTTGAAAGAATCTGGATGTGGACACCG
ATCTTCTGTTTTCTCAAGAATTTTGGTCATCTTATCTGATGGTATTCCAA
ACCAAAGCCCACAGGGTTCACAAACAGGATCCAAAAGTGGATTATCTACG
CTCTTTCAACGAGCACGAGGAATCAGAAGTGAAGGTAACACAATTTCTTC
ATTCAATAAAATAACGGGCAAATTTCTTCTCAATTTAATCAAAAGTTGGC
GCTTTTTCTGATCCAGTAATAATATCGACATCTTCATGACCCATGCCTGA
TATCAGGTTTTCCATCAAATTTTTCCATCTATTGTCTAACTCATTGCGCG
AGTTAGAAGAATTTTATATCTAAAAGTGGGGCTCCTGTACCACTCCATAA
CTTTTGATCTGGTTGCCCCCCAGTGGAACAGAGAAAATCTCCTATTTATG
ATATGCACTAGTGCAATGAATGTCTTCTGACATTACATCACGGACCCAAC
AGCTGATTGGTTGCAAGTGACGTATTGACTGATTTTACGTCACTTACAAC
AAATCAGCTGTTTGGTCAGTGGAAGACATTACAATGGTGTATATAATGAA
TACAAAATTACTAATCATTTCATCCTCCTATTCCAACAAACAGGTATCAA
GATCATCGCAATCGGTGTCGGAAAGGAATTCGAAGTCAACAAAGATAAAG
ACGGTCATGATACTGTCGACCTTGGTCTTGAAATCTTACGTGAAATCACC
GGCGATCCAGCCCTCGTTTTCACGAGTCAAACATTCAGTCAATTGACCAA
TAGTGATTTCATCAAACAAGTTATCGACCCTATTTGTACAGATCCTGCAA
TCTCGTCAACTGTTGCACCAACGACCACCAAGAGAACTACTACTCAAACA
ACTAAAGCAACTACTAAAGCAACTACTAAAGCAACTACTAAAGCAACAAC
CAAAGCAACTACTAAAGCTACCACCAAAGCACCAGACGCCACCAAAGCAC
GCCCAGGTCCACCAACAGGCCCAACCGTCGACCCCGATACTGGTGTCTGT
AGATGCAGAGGTCCAACTGAAAAAGATTTCCCAGGATTGAGTTTATCAGT
TTTCGATATCGAGCACTTCCCAGGTACTTACGATTTAGTCCCCTCTTTAC
AGTTGAGTTTCTCTAATTCGATCTTAAAGGGACCAAACAGAGTCTTCTAT
AAGAGGCCAAAAGAGCCAATATTTTGGGTCGAATCACAGAAAGAATCGAA
TAATAAAGGTTTAAATAAGAACGAGTTAACTTCCCTCGAAGCTTCTGAAG
ATTTTTAGATGTAGATTTAAAAGTGATAGTAACACAATACAAGCCTTTTT
AAGCAAGAAATATATGACCTAGAAATGTATCGACAGCTATTGTACTCAAC
CAAATTTGAACAGGAAATTGATTGAAAATTAAAAATGTCACTCCTTAGTC
GAAAGCAACAAAGAGTTTTAACTTTAGCATAATGAAGAGACATCGACTCA
CGATCTCATTTTGATAATTCTAGGAGAAGCACGCAAAGACAAAGTGAAAT
CTGCCATCTTAGACATTGTGAAACAGAGTCGACAAATCAAGGAACTTCAA
GCAAACTACAATGGCTGCAAACGATCATTACGTCACATTTTACTCAAGGT
ATAATTTTAGTATCCTCACTCTAGGAGATGCTGGATTTGTGTTTGTTTGT
CAAAAAATAAATCTGTTTGTTGTTTTATGGGCCGACCGTACATGAAATTC
CTCGCGAAATTTTTCGCGTTTTTGTCGAGATATAGTAGTTTTTGCTGTCT
TTTTAGGAGATTTTATAGGTGAAATTCTACTTTCATTTTTATTTTTTCGC
CGACCGACCGACCCTCTTTTTAGGGTAGCTTGGCCCGTAAAACAATAAAT
TAAATTAGCCTCACCTTACAGCAAAAATTTTTAACTAGCGAACATTAACA
GATATCCATAAACCAACTGATAATTTTGACCAATAAAAAAAAGCAAGTCC
AAGAAAATTTATCAAGCCAAAATATTCAAAGCAAAAGATGAAAGTTTTAT
CAGATATCACATCCCTGATTTAAAAACCTAGTACTCAATATTATATCATA
ATATCAAAACTTTCACCAATTTTCAATCCCTATCTCATTTTCAGACGGTC
AACCAATACAAAGATGGTACACAGCTTTTCTTCAACATTGACGAATGTAC
GGTGAATGCTGAATGCAAATTTCCAACATGGTTGAATCGATTGGAAGAAA
AGAAATGCAAACTAGAAGACGAATTGAGATGGTACCAAGGAACTTTCGGT
AGAATCTATGATTACGGTAAGATGATTTTCTTTGGCATTAGTATAAGTTC
AACAACCTGGGATTAACTCTTAGAATGTGCTATAAAGCTATTATCAATTA
TGGGAAATAGTACTGCGGACTTGTAGCTCAATCTGAGATTTACAGATGAA
TTGTTTTCCTGAGAAATATGTATGATATAACGAATGTTTCGAATAAAGAA
TAGCTTGTCCAAATCAATTAGGTTCTTATGCTACCTGCGGCTTCAGAGTT
CTGGTGATTCACACTACATGAGCATGTACTAATGTTTATCATATATTTTT
TTCTCTTAGGAGAGAATGCTTACAATCAATTATCTGGTGTTTGGAAGTAA
Coding sequence (CDS) from alignment at sc0000228_pilon:481165..485914- >XLOC_032194 ID=XLOC_032194|Name=XLOC_032194|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2742bp|location=Sequence derived from alignment at sc0000228_pilon:481165..485914- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGTTGTTGGTTGTATTACTTGTTGGGTTGGTTGCATATGAAGTTGT
TGGTTGTATTACTTGTTGGGTTGGTTGCATATGCAACAGCACATAACATT
GTGGGAAATGTCAACCATAACAACAAACATAAAGCTACAAGTGATGCTTG
TACCACCTTCTCCGAATTCGCTCTTGTTTTGGACGAATCAAAATCCATTC
AACCAGACGATTGGAAAGATGTGAAAAATTTCGCCAGCGAAATTGTCCAA
AAAGTTGGCATATCTACATATGGTAACAGAGCCGGTATCGCATCGTTCTC
TGATAGGGCGAGAATCAGAATCACTTGCAAACAACACGATAACACCAAAG
ACTTCATCCAAGCTATTAATGCTTTTGAACGTAAAGGAACTTACACGAAT
ATGGAAGATGGCTTGATTAAAGATGCAACAGCACATAACATTGTGGGAAA
TGTCAACCATAACAACAAACATAAAGCTACAAGTGATGCTTGTACCACCT
TCTCCGAATTCGCTCTTGTTTTGGACGAATCAAAATCCATTCAACCAGAC
GATTGGAAAGATGTGAAAAATTTCGCCAGCGAAATTGTCCAAAAAGTTGG
CATATCTACATATGGTAACAGAGCCGGTATCGCATCGTTCTCTGATAGGG
CGAGAATCAGAATCACTTGCAAACAACACGATAACACCAAAGACTTCATC
CAAGCTATTAATGCTTTTGAACGTAAAGGAACTTACACGAATATGGAAGA
TGGCTTGATTAAAGGACAAAGACTTTTGAAAGAATCTGGATGTGGACACC
GATCTTCTGTTTTCTCAAGAATTTTGGTCATCTTATCTGATGGTATTCCA
AACCAAAGCCCACAGGGTTCACAAACAGGATCCAAAAGTGGATTATCTAC
GCTCTTTCAACGAGCACGAGGAATCAGAAGTGAAGGACAAAGACTTTTGA
AAGAATCTGGATGTGGACACCGATCTTCTGTTTTCTCAAGAATTTTGGTC
ATCTTATCTGATGGTATTCCAAACCAAAGCCCACAGGGTTCACAAACAGG
ATCCAAAAGTGGATTATCTACGCTCTTTCAACGAGCACGAGGAATCAGAA
GTGAAGGTATCAAGATCATCGCAATCGGTGTCGGAAAGGAATTCGAAGTC
AACAAAGATAAAGACGGTCATGATACTGTCGACCTTGGTCTTGAAATCTT
ACGTGAAATCACCGGCGATCCAGCCCTCGTTTTCACGAGTCAAACATTCA
GTCAATTGACCAATAGTGATTTCATCAAACAAGTTATCGACCCTATTTGT
ACAGATCCTGCAATCTCGTCAACTGTTGCACCAACGACCACCAAGAGAAC
TACTACTCAAACAACTAAAGCAACTACTAAAGCAACTACTAAAGCAACTA
CTAAAGCAACAACCAAAGCAACTACTAAAGCTACCACCAAAGCACCAGAC
GCCACCAAAGCACGCCCAGGTCCACCAACAGGCCCAACCGTCGACCCCGA
TACTGGTGTCTGTAGATGCAGAGGTCCAACTGAAAAAGATTTCCCAGGAT
TGAGTTTATCAGTTTTCGATATCGAGCACTTCCCAGGTATCAAGATCATC
GCAATCGGTGTCGGAAAGGAATTCGAAGTCAACAAAGATAAAGACGGTCA
TGATACTGTCGACCTTGGTCTTGAAATCTTACGTGAAATCACCGGCGATC
CAGCCCTCGTTTTCACGAGTCAAACATTCAGTCAATTGACCAATAGTGAT
TTCATCAAACAAGTTATCGACCCTATTTGTACAGATCCTGCAATCTCGTC
AACTGTTGCACCAACGACCACCAAGAGAACTACTACTCAAACAACTAAAG
CAACTACTAAAGCAACTACTAAAGCAACTACTAAAGCAACAACCAAAGCA
ACTACTAAAGCTACCACCAAAGCACCAGACGCCACCAAAGCACGCCCAGG
TCCACCAACAGGCCCAACCGTCGACCCCGATACTGGTGTCTGTAGATGCA
GAGGTCCAACTGAAAAAGATTTCCCAGGATTGAGTTTATCAGTTTTCGAT
ATCGAGCACTTCCCAGGAGAAGCACGCAAAGACAAAGTGAAATCTGCCAT
CTTAGACATTGTGAAACAGAGTCGACAAATCAAGGAACTTCAAGCAAACT
ACAATGGCTGCAAACGATCATTACGTCACATTTTACTCAAGGAGAAGCAC
GCAAAGACAAAGTGAAATCTGCCATCTTAGACATTGTGAAACAGAGTCGA
CAAATCAAGGAACTTCAAGCAAACTACAATGGCTGCAAACGATCATTACG
TCACATTTTACTCAAGACGGTCAACCAATACAAAGATGGTACACAGCTTT
TCTTCAACATTGACGAATGTACGGTGAATGCTGAATGCAAATTTCCAACA
TGGTTGAATCGATTGGAAGAAAAGAAATGCAAACTAGAAGACGAATTGAG
ATGGTACCAAGGAACTTTCGGTAGAATCTATGATTACGACGGTCAACCAA
TACAAAGATGGTACACAGCTTTTCTTCAACATTGACGAATGTACGGTGAA
TGCTGAATGCAAATTTCCAACATGGTTGAATCGATTGGAAGAAAAGAAAT
GCAAACTAGAAGACGAATTGAGATGGTACCAAGGAACTTTCGGTAGAATC
TATGATTACGGAGAGAATGCTTACAATCAATTATCTGGTGTTTGGAAGTA
AGAGAGAATGCTTACAATCAATTATCTGGTGTTTGGAAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000228_pilon | genome | sc0000228_pilon:481165..485914 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1333-1371:40 |
| Aaloc | 1159-1329:507 |
| Aaloc | 1036-1158:1126 |
| Aaloc | 556-1032:2006 |
| Aaloc | 385-552:2636 |
| Aaloc | 43-381:4203 |
| Aaloc | 1-39:4751 |
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