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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000228_pilon:444855..450957+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_032182 ID=XLOC_032182|Name=XLOC_032182|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6103bp|location=Sequence derived from alignment at sc0000228_pilon:444855..450957+ (Clytia hemisphaerica_ch_hm2_pilon)
TGCGAAATTGCATCCAACAGCCAATTCAACATTTTGACTGTAGTTGAGAA
TGAAGTTCAGGTGATACTTAACAAGACGTGTTCAAAACAAGCAACATTCG
ATGTCTTTGTATGGGATGGTGACTGGAAATCGTTGCATTCTTCTAAAGTG
GAATCTCTATTCACTGTTGAAGAGACTAACAATCAAGACCAGGTCAGAAT
GTATTTTGAGACCTGAACAAGTTGATTGAAATCCTTTAGTTGCTTTTCAC
TCTTTTTAAAGTAGGATGCCTTAAAGACAAAGAATTCCCGTTAATTCAAA
TCTGCCtattaattgaaattttcaggtcCGATTACCAAACAGCTAAGCAG
TCTTTCTGtatgaaagtctttttcttgTAAACTCCTTTCTCAAGCGCCTA
CATACATAACTGATAAGTAATGCACTAAAGCTATTATacattataaattt
tttgagaTGATGTAGTTTGCGATACATTTGAGAGTCATGTATGTATGTAC
GTTTATCTTCAGATTGTTAAACCTTCTTTGATCTTACTTTCTATCAGATG
ACAATCAGATTCACCAAGCATTTATCAGGGATCGTTATCAAGATCACCAT
CAAATGTCCAGAAGAAGCAGTCCTCTCATCTGACTGCTTTGTTGTTAAGT
TCAATGGGTCGACTACAGGTAATCCCTCTATAAAAATCGCTGTTTTGGAA
ATATCCAGTTTTGCTATCAATTTTAGCGATGGTTACTTTattgggataaa
ttttcgcggataTTAAATTTCACGTTTGGACTTAtttgcgaaattttaag
atttcgttAAGTCcacggatggcactattgggagACAAcatttttcacga
ttttgttctttttactgtcaaatcatgcattttGGTCCGCGAGAACTGCG
AAGTTTTATCCCCTTATAATATTTTCCCCATTAAAATACTCGTGGTTGAA
TGGACTAGTCTTGATCCAAGCCATCTGGTCGAATgatattgatattttga
ttACACAAGACTTCTAGAATGGACATCATGTACTGTAATAAAAATTTGGT
ACGCTGCAAGTTCTGAAGGATTGGAGCCACTTCTTGAACGAAAGTTAAAA
ACAGGCTCCaaaaaaaaaGCACAAAATATTTCTCCCATTTTCAATTAGAA
ATGGTGAATTTTGACCTGATCAACAAGATATTGGAgccttcaacaacaac
aacgacaactTCACCAACTCTTGATACACTGACGTCTACAGATGAATCTG
AGGTACGGTCTTCGCTCActccatttttcaaaactttaactGACAAAATT
CTCCATGATATAATACAtccatccctgtctcacagtccccTGTTAATCCT
TTTCCAATAGCAGAGATAAAGTTTCCTAtcgggatagaaattatattgtt
tcaaGCTTACAATATCTAGTCGGGATGGTTTTTGAGTGTAATTTTTACAT
TGAATgttgaatggggatgaaattaaagtcaatttcccagtggggctgaa
atggAAGGGTATTTTACGCACCGGGGACGACAATGTTGCCAAATTGTTca
gcaggtctgtgacacaagggtgcTATAATTGATTGAACCTCAGGTTCAGA
CAACACCCACCCCAAATTTTCTAATTCTCTTCCGTTTAAATGGGTATTGG
ATGTATGCATCCCAAACTCCTAATTTTATACATTAATTAAAAGTGAAAAC
TTAGCCGGGCAAAGTTTTTCATCAGGATGAACCTGTCTAGAAATGTTTGT
CAATTCAGCACTGAAAGTTTTAGCGGTTCATTTTATTACCTTTAAAGGTT
TATTTTAGCGATACCGCAAAACGACCCTTTTAAggtacaaatttaaaaaa
aacctataAGGTATTTTTTCATTGATACCTTACAGGTACTTTTAGGTACC
TTTTGAGGTATGAAAAAATACttccaaaagaatttttttgtccCCGAAAA
GGTATTTTTAAGTCACCAAAAAGGTAATTTTCAAACGATACCGCAAAACG
ACCCTTTTAGGGTAAAATTAGTCTGATATACCATTAATGTGCTTTAAAAA
CACCACCAAAAGGATTCAAAAGTGCCGAAAAAGCGGTTTTAGTTTTTACC
CACGGGGTTGTTTTTCATCACTTACATTGATGGTGCGAAGAAGGtatttt
ttttacctcctagatATAATGAATTTCCTATCATTTCTTCACTAGAATAA
GCGAATACTAATTGAACGAATAACTCATAAAGTTAAGGAGATCAAAGCTC
CTCTCTTTATTTTTGTAGATTGGattaaatgaaatttacaaTATTGataa
atatagaagaaagccaaatgattcaataaatagaattaattaaatcataa
attaaataaaaattacaattgacaaaaaCTAGTAGGCCTATTCTATATCA
CCTAATAATCATACACTATTTCCTACTATTCAGTAAGATTATTCAATCTT
TCTAATTTATTCACTGCCGTCATTTTTTCTGTATAAGACAGCAATTTCAT
AGGGCAACGCCGTCAGAGGATCTCCTGACTTTCCTATGGTGATGCCATTC
AGGTGAATGAAGAAATCTTGATCCTCAAAAGTGTCAGGGTTAGCATGGCC
GATTCGAGGAGTGAGCGCGTTCGCGATTCCATAATAATTTTTGGTATCTT
CTCGAAATATTACCGGTAGATTAATACTCCCACAACAGCACATCGATCTG
TTGAAAAAGAAAGTTACATTCTGTAAAACTTTTGTTCATTATATTCTTAC
TTTCAATGATATTTCAATGATTCTATACGCATGTTGCAAAGTAACTTATT
AGATGCccggggcactgaccttgacggccgacggggacgtgccgctgtaG
TTTGAGaagttgaccctgtcagatatgaatttttgataaaattgggACCC
TATCTGaacgaaaaatttaaatttttcttctttccagttaatttgggacc
ctgtcagatatcttaaGAGTCTTAAAAAGGGACTCTGACCAATGACACGT
CCCCATATCAAATTTTGCCTAATTGGCCCACTCCCCTGATTCAATTAGCC
GAATTATGCTTACCTGTTCACCATTTGCAAGGTTTGGGTATATTTCAATC
AGAATTTTGACGGATTTGTGATCCTTGATCAGTTTTGCTCGTCGATCGTG
CAGGTTAAGCTCCAAACGAGTCGTTCTTTTTACTTAGAGCAATAGGTTTG
TGATTTGAGAGTTGCAATATGCTTTTGTACCGAATGTTGATCTTCTCCAG
CAGGAATATTTGGGAGAAAGTTGACCAATCCCAAAAGTTTTTTGGATCTC
TTCAGCAgcgcaaaataaaagttaataaaGAATCTAGCAAGCGACTAAAA
TTCGGACTTTAAATAATTTGCGACTGAGAGCTTCGACCTGTCAGATTGAC
AGACAAAGCGCAAATGAGCGGCacaatcaaaaatttgatttttgaaagag
GCGGGAGTATGGGTTTCTCTCAGACTTTAAGGAGAATTTACTCTTTCTAG
TTCTGGAACTATACCGCGGAAATATGATTGTTGTCATTTTCTCACAACGT
CCCGTCGTTCTCTCCGTCCCAGGACTCTTTGGGATGATACCTCAAAGAGC
ATCGATTTTATCAGAAAGGGTACGAATTTTTATCTCTAAGGTATCAAAGG
TAGCGAAGCTCCATAGACACGATTGGGCAAGAATCATAGACGCGATTAAA
AATACCTCTCAAGGTAtttttttGCCGCCTGTTTTCCCgcaagaaaatat
tcaaaaatacctcaaaGGGTAAGAATTTGTATCTCTAAGGTATCAAAGGT
AGCGAAGCTCCATAGACACGATTAGGCAAGAATCATAGACGCGATTAAAA
ATACCTCTAAAGGTAtttttttGCCGAATGTTTTCCCGcaagaaaacatt
caaaaatacctcaaaGGGTACGAATTTGTATCTCTAGGTTATCAAAAGTA
GCGAAACTCCATAGACACGATTAGGCGAGAATCATAGACGCGATTGAAAA
TACCTCTAAAGGTATTTTTTGTCGCCTTTTTCCCGAGGCTTCAAAGGTAG
CATAACTCCAACCCATGATAACATCTATGGAACAACCTTAGGCTAAAGGA
TAGCTTTTATTAAAAGTGAAATTAATTGAGCTTTAAAGGGTTTCAAGCGG
AAATACGGTTAGAATAATAACTTTCAGAGTCTTGGATTATAACAGTTCCC
TAACACAGAGCATAAAATGTTCAATTAAAGACCTTTCATGACCTGTCTTG
CGTGCTCGTTCATGCCAAGCTAGACTCCTCAAGGTCTTGCCGTTCAATCT
TAAGTTTTTTCAAACGACATCCCAAGGTCTTCCTACTGAGTGAATGAGAA
TCTTGACACTCTATACTTTATTGTTTATGAGATACCTAAGAGGTACATAA
TGATCCCTTTAGCGTTGAGGGGATCTTCAGAATTCTTTCGAAGGCTTTTT
TCCTGCCCCTACGGTTACTATATTATACCTTGTTcactttcgaatttttg
gaaatcccgAAAATCACTCAAAAGGTACAAAATAATTCCTACGGGGTGTT
TTAAAATTACCTTAACGGTGTTTTTTAAAATCGTGCCACAGAAGGTATCA
TTTTAATCCTTAAAGGAATATATTTATTCCCGAAAAGGAACAAATTTGTT
ATCTAAAGGTAAACGCGATTATTAGAACCTCTAAAGGTACTAAAATGAAC
CGCTAAAACTTTCAGTGAGCTATACAAAGTTTTCCATTTTGACCATTTCT
GATTTCAACATTAGATCATGGTAATCGTTGGTTGTGCAGTTGGTGGCTTG
GTGTTGTTGCTGTTATTCATCCTCTGTCTTATTTGCATTGTCCGcaagaa
aaagaaagctaaagaaaaacaacatcagAAGTAAGTTTAACATCTATCAA
CCCTGTCGCTGACATACTTTTATTaaatccactgggagttaatcacgcGC
TTATCTtgacggacgataacatcgtctagtgTGAAATGTATGAAGACATT
GTATTGAAATGCTCACCGGTAAACCCTAAAAAACTCAAACCCCATTCCCT
TTGAAACGTAAGAGTTAAAAGGTGTACTTGCATTTGGAGGGACATTGACA
TTGAAAACTCGCTTATTTAACAGACCCCTTAAAAACTAGAAACTACTCAG
ATAAATGTGTGCATGAAGTTAATGGGTGCCTCGAGACTCCTTACGTTTGG
GTAATACTGTGTATACACGATTagtcatcaatcaatcaaatgttGCAGTT
TTTCCATCCCATGTGAAATTTAATTTAGTTTAACTTGTTTTATTGCGTTT
CCAGGGCTATATTTATGAGTGATGTCCAAGTATACGAAAACGTAAGCATT
TTTATCGTTTCATTTACATAAagtacttaaaggttttatttttgcataaa
tATTCCAGTTCAATATCAGGACAGtctctgcctattgttatattatgctg
atataaacaaaaaaaaattttcttttcctctttctgaccaatcttgctcc
acatccatgtcaatccaatgtgaaaaagcttgtaaatcaaaattaatgag
aaagcaaacgatatcactcttatttaaaaaacaaaaatcaaatattcTTC
GTTTACAATTTCAGCCTTACAAAAGAAGTACCATCGGAAACCCTACGTAC
GATAAAAAATTGCATTCAACAAGGGCCCATCCACACTGTGACGATCCTTA
CAATCAAAACCGAGAATACGCTGAAATTGATCCTTCAATCTACAGTTTAC
CGCTAAGTCAAAACCAACCCATAGAACATTCTAAACCCTATGAATTTATT
GATGAAAATAAGACACGCCCACAAACTAATCACCCTTCCGGAAGACCCGT
TTCTGATCCGGTTTACAGAGAAATAGAGGGAGCGGAATATGATGAAATAC
GTAACGGAAAACCCGTTGTTCCGTTTCCAGCACCGGACTATCCACCGGGT
GTTGGATTTTTAAACAACAACACTAAAGAACCTTTGTATAGAATCTTAGA
AGAAAAAGACTGTGATTTTACAACAGGGCGGAATGATGTGGGGCGTTCGA
CCTCCATTAGACATCCACCACCCGATTATTCTCCGCCCCCTCCAACTGGC
TGA Coding sequence (CDS) from alignment at sc0000228_pilon:444855..450957+ >XLOC_032182 ID=XLOC_032182|Name=XLOC_032182|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2118bp|location=Sequence derived from alignment at sc0000228_pilon:444855..450957+ (Clytia hemisphaerica_ch_hm2_pilon)
TGCGAAATTGCATCCAACAGCCAATTCAACATTTTGACTGTAGTTGAGAA
TGAAGTTCAGGTGATACTTAACAAGACGTGTTCAAAACAAGCAACATTCG
ATGTCTTTGTATGGGATGGTGACTGGAAATCGTTGCATTCTTCTAAAGTG
GAATCTCTATTCACTGTTGAAGAGACTAACAATCAAGACCAGTGCGAAAT
TGCATCCAACAGCCAATTCAACATTTTGACTGTAGTTGAGAATGAAGTTC
AGGTGATACTTAACAAGACGTGTTCAAAACAAGCAACATTCGATGTCTTT
GTATGGGATGGTGACTGGAAATCGTTGCATTCTTCTAAAGTGGAATCTCT
ATTCACTGTTGAAGAGACTAACAATCAAGACCAGATGACAATCAGATTCA
CCAAGCATTTATCAGGGATCGTTATCAAGATCACCATCAAATGTCCAGAA
GAAGCAGTCCTCTCATCTGACTGCTTTGTTGTTAAGTTCAATGGGTCGAC
TACAGATGACAATCAGATTCACCAAGCATTTATCAGGGATCGTTATCAAG
ATCACCATCAAATGTCCAGAAGAAGCAGTCCTCTCATCTGACTGCTTTGT
TGTTAAGTTCAATGGGTCGACTACAGAAATGGTGAATTTTGACCTGATCA
ACAAGATATTGGAgccttcaacaacaacaacgacaactTCACCAACTCTT
GATACACTGACGTCTACAGATGAATCTGAGAAATGGTGAATTTTGACCTG
ATCAACAAGATATTGGAgccttcaacaacaacaacgacaactTCACCAAC
TCTTGATACACTGACGTCTACAGATGAATCTGAGATCATGGTAATCGTTG
GTTGTGCAGTTGGTGGCTTGGTGTTGTTGCTGTTATTCATCCTCTGTCTT
ATTTGCATTGTCCGcaagaaaaagaaagctaaagaaaaacaacatcagAA
ATCATGGTAATCGTTGGTTGTGCAGTTGGTGGCTTGGTGTTGTTGCTGTT
ATTCATCCTCTGTCTTATTTGCATTGTCCGcaagaaaaagaaagctaaag
aaaaacaacatcagAAGGCTATATTTATGAGTGATGTCCAAGTATACGAA
AACGGCTATATTTATGAGTGATGTCCAAGTATACGAAAACCCTTACAAAA
GAAGTACCATCGGAAACCCTACGTACGATAAAAAATTGCATTCAACAAGG
GCCCATCCACACTGTGACGATCCTTACAATCAAAACCGAGAATACGCTGA
AATTGATCCTTCAATCTACAGTTTACCGCTAAGTCAAAACCAACCCATAG
AACATTCTAAACCCTATGAATTTATTGATGAAAATAAGACACGCCCACAA
ACTAATCACCCTTCCGGAAGACCCGTTTCTGATCCGGTTTACAGAGAAAT
AGAGGGAGCGGAATATGATGAAATACGTAACGGAAAACCCGTTGTTCCGT
TTCCAGCACCGGACTATCCACCGGGTGTTGGATTTTTAAACAACAACACT
AAAGAACCTTTGTATAGAATCTTAGAAGAAAAAGACTGTGATTTTACAAC
AGGGCGGAATGATGTGGGGCGTTCGACCTCCATTAGACATCCACCACCCG
ATTATTCTCCGCCCCCTCCAACTGGCTGACCTTACAAAAGAAGTACCATC
GGAAACCCTACGTACGATAAAAAATTGCATTCAACAAGGGCCCATCCACA
CTGTGACGATCCTTACAATCAAAACCGAGAATACGCTGAAATTGATCCTT
CAATCTACAGTTTACCGCTAAGTCAAAACCAACCCATAGAACATTCTAAA
CCCTATGAATTTATTGATGAAAATAAGACACGCCCACAAACTAATCACCC
TTCCGGAAGACCCGTTTCTGATCCGGTTTACAGAGAAATAGAGGGAGCGG
AATATGATGAAATACGTAACGGAAAACCCGTTGTTCCGTTTCCAGCACCG
GACTATCCACCGGGTGTTGGATTTTTAAACAACAACACTAAAGAACCTTT
GTATAGAATCTTAGAAGAAAAAGACTGTGATTTTACAACAGGGCGGAATG
ATGTGGGGCGTTCGACCTCCATTAGACATCCACCACCCGATTATTCTCCG
CCCCCTCCAACTGGCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000228_pilon | genome | sc0000228_pilon:444855..450957 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 571-1059:5615 |
| Aaloc | 535-570:5306 |
| Aaloc | 418-531:4765 |
| Aaloc | 316-417:1151 |
| Aaloc | 193-312:548 |
| Aaloc | 1-192:1 |
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