|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000228_pilon:440250..442796+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_032181 ID=XLOC_032181|Name=XLOC_032181|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2547bp|location=Sequence derived from alignment at sc0000228_pilon:440250..442796+ (Clytia hemisphaerica_ch_hm2_pilon)
GTTTGTTTTAGTCACAATACAATGTTTACTCGAGTTTTAGGTAAAATGTT
ATTATGAACTGTTATAAGACCCATTATGAGCTTGTAACGCTTGGTGTTTG
TATGACCTTGAAGGCATCACCCCCTTGGTTATAACTCGAGTCATTGTCCT
TGTCCCTGTCtcaaaacaatgttttttccaGTTTCAGGTAACATTATGAT
CCAGTATGAGTTCCTAACGCTTGGTGTTTGTTTGACCTTATTTGGCATTG
GTGCTGGTGATTTTATTGAACGTCAAGAAATTGGTGACTACTTCCAAGGT
GATGAATCATTCCAACGAGGTGTGAGTTGCAAATTGAACAACCCTACACA
AGTAACTGGAGAAATATTTGGAGACAGTCAATGTATCAATGATTACAGGA
TAGAGTTTGGTAagaacatgttttttataagcataacgcttataagcata
cgaaggctcagatttgcagatttcctaagcatatACCAGCCTGAATTTTT
TATCATGTCAattttttctgttcaaaaatGTTTGGAACTGTGCAAGTAAA
AGAAGACATTCCACGACTAGCcaccaataattttttcaaaaatggttatt
ttgcaaaatgctaagtttctcttttttaatttgtcataattgtcttttat
gcgcaggttttgagtgtatttttaagcaatttagagctcaaattttcaaa
atccccccccctggttggccctcgcggtgtcactaaacttcagccccctc
ccccccaatatgaaaatgcttcctacggcactgagcatatgctatgcctg
gatgctttaaAAGCTTAAGTAAGCATAATCGAtggttataaaaaaaacat
gttcatGGTGAGGCACAAAAAGGTTTCGCTCTTACAGGTATATTTTCTCG
Aggtctaaaaattttaaaagaaaatacttttccattagaaaaaagaaagt
gaaacttaaattttgatgagcCATTTATTAGATTTGGTTctatagatcaa
aagttatgtttaaGAATGAAGACTTTCTTTCAGAAAGACCtcgaaaatgt
taaaaatcaacCGATTAAATTTGTATTTAAAATTGACAATCGCAATAAGC
CTTCTGCATAATTATCAGCATTTGATAGTAGTTAAACACACAAATTTGGA
AACTTTACTGTCGAAAAGGTTTAAAATCATCATCAGatcattttaatttg
tttttatcgAACTTTTCTTCAGATTTTCAGTTGCAGCATGGTtatagact
ggataaagtcaaTGTAAAGATGGATATCGAAACCatgaatgggctcttcc
agaaaaaatccgttcatggggggtggaggatattatTAtttttttcatga
attacccctggacattttgatttttaaccccctggacacgggttataccc
ctggacaaacatcaaatcaaccccgtggacacaaaaaattaccccctgga
cattgcaattttttggcattttttcaatacccctggacaattcatcctcc
accccccatgaacggattttttctggaagagcccaatatgaTGAATTTGA
CCAGCTATTTTggcattttccaaaaaattcttCCTAGCATTgggaaattt
cttttcataaaaaaaatcaccaCCAAAGTGACCAGCACAgcaaattatct
ttttttaacggtcaaatcaaaaacatgatatATCCTTTAATCAGATTGgt
tgattttcaacgttttttttttttctgaaattgaaaataagttttttagT
CATTTAAACACAACTTTTGATCTATAATGAACCAATTTAATAAATAAcgc
atcaaaatttaagtttatcttatctttcttctttcgtaTGAACATTCTTA
GAAGCTTAATTATAAAAGCTTTAATTCTTCTCAGAATGTGGCGCCATAGA
TTTGGATGGATCTACGACAATCAAATTCATTAGTTCACAGGATGTGAATA
ATACTATTTTCAAGTTGACTGGATTAAGATTGTGTGACACATCAGATGAC
GTGGAATTCGTTTACCAACCATGGGGATATGGCGAATGGATAGACGTTGG
AGATATTAGTAGTTCATTGGCTTTGATTGATCACAAACGAAAGGTTTGTT
GATTTTAATTAGATgatgactttcaaaaaaaattcaattgttGATCACTT
AGCAGATACCTCTTTTTTGACGATATTCAAATGTGGATCAATTTACGCAA
ATTACGCgagtttttccgaaaattcgagaaatttaatgaaaatcaaagaa
attaattgaaaaagggacctcaaattttaataaacggtaGAGCCTAATGA
CCGGGGGTTTATTAGACACCTGAGAGTATTAAGCTTTATACAATCTGTCT
TTTAAATACCTTTGAGATACCACGGATAACTTATTCTACGGTTCTTGATT
TTACAACAGGAGATCCAGTTTCAATTTCGACGTCTATGGTCAGGGCAACT
CTTGAAAATTGGCATCAAATGTTATAAGAAAGATGGTAGTAAGCGAGTTC
TTTTGCCAGCGTCTTGTGCTGTGGTCAAACATGAAGGCTCGACTACA Coding sequence (CDS) from alignment at sc0000228_pilon:440250..442796+ >XLOC_032181 ID=XLOC_032181|Name=XLOC_032181|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1230bp|location=Sequence derived from alignment at sc0000228_pilon:440250..442796+ (Clytia hemisphaerica_ch_hm2_pilon)
GTTTGTTTTAGTCACAATACAATGTTTACTCGAGTTTTAGGTTTGTTTTA
GTCACAATACAATGTTTACTCGAGTTTTAGTTTCAGGTAACATTATGATC
CAGTATGAGTTCCTAACGCTTGGTGTTTGTTTGACCTTATTTGGCATTGG
TGCTGGTGATTTTATTGAACGTCAAGAAATTGGTGACTACTTCCAAGGTG
ATGAATCATTCCAACGAGGTGTGAGTTGCAAATTGAACAACCCTACACAA
GTAACTGGAGAAATATTTGGAGACAGTCAATGTATCAATGATTACAGGAT
AGAGTTTGTTTCAGGTAACATTATGATCCAGTATGAGTTCCTAACGCTTG
GTGTTTGTTTGACCTTATTTGGCATTGGTGCTGGTGATTTTATTGAACGT
CAAGAAATTGGTGACTACTTCCAAGGTGATGAATCATTCCAACGAGGTGT
GAGTTGCAAATTGAACAACCCTACACAAGTAACTGGAGAAATATTTGGAG
ACAGTCAATGTATCAATGATTACAGGATAGAGTTTGAATGTGGCGCCATA
GATTTGGATGGATCTACGACAATCAAATTCATTAGTTCACAGGATGTGAA
TAATACTATTTTCAAGTTGACTGGATTAAGATTGTGTGACACATCAGATG
ACGTGGAATTCGTTTACCAACCATGGGGATATGGCGAATGGATAGACGTT
GGAGATATTAGTAGTTCATTGGCTTTGATTGATCACAAACGAAAGAATGT
GGCGCCATAGATTTGGATGGATCTACGACAATCAAATTCATTAGTTCACA
GGATGTGAATAATACTATTTTCAAGTTGACTGGATTAAGATTGTGTGACA
CATCAGATGACGTGGAATTCGTTTACCAACCATGGGGATATGGCGAATGG
ATAGACGTTGGAGATATTAGTAGTTCATTGGCTTTGATTGATCACAAACG
AAAGGAGATCCAGTTTCAATTTCGACGTCTATGGTCAGGGCAACTCTTGA
AAATTGGCATCAAATGTTATAAGAAAGATGGTAGTAAGCGAGTTCTTTTG
CCAGCGTCTTGTGCTGTGGTCAAACATGAAGGCTCGACTACAGAGATCCA
GTTTCAATTTCGACGTCTATGGTCAGGGCAACTCTTGAAAATTGGCATCA
AATGTTATAAGAAAGATGGTAGTAAGCGAGTTCTTTTGCCAGCGTCTTGT
GCTGTGGTCAAACATGAAGGCTCGACTACA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000228_pilon | genome | sc0000228_pilon:440250..442796 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 478-615:2410 |
| Aaloc | 271-477:1887 |
| Aaloc | 43-267:184 |
| Aaloc | 1-39:1 |
|
