|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000228_pilon:434351..439288+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_032180 ID=XLOC_032180|Name=XLOC_032180|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4938bp|location=Sequence derived from alignment at sc0000228_pilon:434351..439288+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAGATGGTGTCAGCTGCTAAATATTCACGTGCAGAACGTGAGCTGAA
ACCAGCCAGAGTCTATGGCACTGGAGCCAAAGGTAAGTGGAAAAACTTGA
CTATTTCAAACTCAGTACATTAGCAGTTCTGTCGGTCGGTGGTTTTGAAG
CGGCTAGAGTTTCCAAATGAGGAACTTTAATACTCTGGAAAAGAATATTT
CCTGTGCTAGCTTTGTGCACTTTGGAAATAATCATGGAAATAAAACTGAA
CCCTCTCGTAAAGAATAGAAGATAAATAACATTGACCAGGTATTTAGGAA
ATTCACCAGGTAACTACTTCCTGATTTGGAATAAATTTGCTGaacgaaat
tcaaaaaaacgaTGGAAAATTCAAGATAGTGGCCATAAAAAGTAGCAAAA
TCGGGAAGTTATTCCTTTTTCAGACAACGCCATTTCTTCGTTTAATTAAG
TTAAGGAAATATGGAAATTCTAGCCATTTGGGTATTGTTGCACCGGCTGT
CGGttgtctcaattttttttttaaacttgcaTTTCATTATTGTTAGTTTG
TAAGATCATAAACTGAGTCGAGCTCAATTATGAGTGATAAAGTGTTTCAA
ACTGTTTTTAAATGATGGGAAATATTATTAAAATGACACTCGACAACTAA
AACAGATCTGAGCTTTCATTATTTTGTCTTTATCTAAATTATCACACTAT
TAATATTAAATCATAGCATTATTTGAAAAAGCTGAATTGGAAAGTGACAA
GACTCAACCTAACCATCTGATCATTGCTATTTCCTCTGATCGTGGTCTTT
GTGGTGGTATCCATTCTGGTATCTCCAAAGCCATTCGTGCCAAAACTGCT
GACTCTGGTGTAGATACTAAATTAATTATATGCGGGGACAAAGCAAGAAG
CATTTTACAAAGAACTCATAGTAAGTTACACTGCAGCTTTCTagatattt
tccttttctctaaTTCCATGTTCTCAGAGAAATAATAGATACAAGATGCT
TGCTTGCAAGCTTGCAAAACTGGGTTTGTGTTTGAAAGCAGTGTAAGTTA
TTTTCATTGACAaaccaatttttattttgttttgagtgagATTATTTTTA
ACCTATAACTTTCTGTTGTTTGATAGTGGAATGACATAACGAAAATGTGA
ACTATTTTTACAACTTTCAGGCAATGATATTCTGTTTCACATGAATGAGT
TGGGCCGTAAACCACCACTTTTTGAAGAAGCCTCATTTGTTGCGGAACAA
GTTTTAGATTCTGGATATGAATTTGATTCTGGTGAAATGATGTTCAATAA
ATTCAAGTAAGTTGCTTTCTTTTACCGCCTATCTCATAGCTGATGACATA
CATTTCATATTTTGCCCTTAAACTTTCCCAGTACTTTTTTCCCCTTTTAC
GCAACCATGGATTtgttatagagactctggataaacatcaaattgaatga
aacggtggagagcgaagtattttCTTTCCAtcgtttcagaaaacaatcga
tttACAGGTTTCgcccgcaaaggacaactgtcatggtgGGTGGAAGGACT
CTGATTAACAAAAAAGATTAATACTTTCttatttctcaaaaatgtttttc
tagtgtctataataattccttgaTGTAACTAATTATCTTCCATCAAGACG
GACCCTCTATCTAGGTTCAGACTACTGGCACTTATCAGCAAGCTGGGAAG
GTTATAGTTCAAACTGAACTTCAATACAGTGTAGTGCAACCATTAGACAA
ACTATAATGCTCGTAATGAATCTGATTCTAACCCATTAATGctgtatttt
tatttatttttttatttattctttatttaacgttggtacaaaacaaaata
gtacaaaagacTAATTCAAACCAACATGACAATCTAATATTTACTTATAA
TAGTAAATAATATaggataaaaattctaaaaacattaaaagattgagcac
agtttgcaagaacaatatatttttgctttcaaaatttttgttttaaagca
ttCTAATGATTCAGATGTTTTGGTCTCATTGGGCAATCTATTCCAAGCCT
GTCCTGCCCGATAGTTAAAGGAGTTCAAGCAAACTGCATTTTTTGGCAGT
GGAAGTTTAATTTGAGCGCCTCTTCTAAGTTTTGGAAGACGTGGGGAATC
GTTATCCTCATCATCACTCCCTGTTTCACGCTGGATAATTTCAAACTGGT
CCCAGCCTAGTTTATTTCCGATATTATTGACGCTCTTATAAACTTCCACT
AACATGAGTTGGAGGTTTTGAGTATGGATAGACGCACAATTTGCTTTAAC
CAAAAGCTCGTCATAATCAAGATTTAGAAGATTTTCTTTAGCTCTAAGAG
CTCTGTAGTGAGCTTCAGTCAAAAGATTGTGTGCCATCTTACTGCAAAAC
ATCCAAATGAGAGGGCAATACTTAAAGGTAGATAAtataaaactattaaa
taatAAGTCTGCCTGATCTTGGTTCAAATATGATCTCATTCTCAGGATAG
ATTTAGtttttttGAGAGGCTTTCTTACATAGATCCTGAATATGAGTATA
AAATGATAAAGCACTGTCGATAGTTATACCAAGAAGAAGAGCATTCTCAG
AAGATATTAGTGAAAAATTTCCTATGTCAATAGATATATTTGCATTTTTA
GTACCTGGAAATAACATCTGGAACTTCTCCGGATTGGCTACAAGAGAGTT
ATGTTCAAACCAAGCGAGAATAACTTGCAAGTttaattttaaggcttcaa
tgacTTCTTGCAAGGAAGAAGCACATTTATGAAGAGTATTATCATCGGCG
AAGTTACAGAGGTCATCTTcatttacaaataaaataaatcattgataaaa
acattgaaaaggaTTGGACCTAAAACAGATCCTTGAGGCACTCCAAATAG
CAAAGGTAGCCAACTACTGTAAGATGAACCCACTCTGACCCTGTGTTTCC
TATTTGAAAGATAGCTATGGATAAGAGCGAGGCTTTTATTTCCAAGTCCA
TACGCATGAAGTTTAGCGATTAGAAGATCATGAGGCAAGCAGTCAAAGGC
TTTAGACAAATCCATCAGAATTGCTCCAATTTTCTCAGAATTAGAAAGCG
ACATCTGCCATTTTCGCAACATGTTAAGTAAAGCACTCTGTGTGCTATAC
TGTTTGCGAAAACCACAGAGTTTAGTAGAGAAGAAGGATTCgagaaaaat
gtttaattgtttcgatattagtttttcaaagatttttgccGGGGAAGGGA
GCAAACTGACGGGTCTGTAGTTATCCTTGTCATGcttgcttttcttttta
tggACTGGGATAATATCAGCCTGCTTCAAGCTATCAGGAAAATGTTGTGA
TTCAAGACTGTGGTTGAAACACGATGTCAGTGTAGGAGCACAAACAAATT
TGGCTAACTTTATGATCTTAGTAGGATCGTATCGATTAATTAAACCTCCT
CTTTTTTCCAGCTCTGTTGTATCATACAGCGTTACTGAACAAGATATCTT
CTCTTTCAACAGCTTGAGTACTGCTGGTAAGTAGGTGTTGATTAATCAGA
AATACTTGTTTGTAAGCATCAAAGATCTATCAAAAGAGACTTTTAAATTT
AGAGGTATAGCTGGGTATGGATCCCAAAATGCAGAAAAATAACCATAAGA
TTGACAATAGATGACTTCTTTACTAACGTTTTATAGCATGTGCTCACAAT
GATGTTTTGGGGTGCGAGGGTTCATTGATTTGCCTGGGTAATAAATAact
aaataaatttaaaaccaacattattattaaaaaaaacaaattttatttct
aTAGAAACCATGTTACAATATGATGACGTAGATGAAGATGTGTTGCGCAA
TTACCACGAATTCTCCCTTGCCAACATCGTTTTCTATGGAATGAAAGAAA
GCGCATGCTCAGAACAATCTGCAAGAATGACTGCTATGGACAATGCTACT
AAGAATGCTGGTATGCTTTTTTGTTATCctctatttttgaagtctcgtTA
AATTCATCTTCATGAAATGCGCCATGGGATCATCCtcccaggaagatggg
ggaaTCAACTTTTGCCCTGGAGGgggaaataaatattttcaccTTGATGG
GGGGCTAGTGCAAATGGTGGACTAGTGCAAATGGTggatttcaggaaatt
ttatGGGAAGTGGGGGTAGAGGATAAgtataatatttcaaatagaTGATT
AAATGTGTCTATATTTCCAGCATTTGTGCGTTCATTGCAGGAAATTGTTA
AGTTTTAGTTAAGTTATTATGTAGAATAAAGAGAATCGGTTGGTCACAAA
AATAGTCTTCCAATAGGGGCAACCCTGGAAAAAGGGTAGGTGGGGAAGAA
GACCAAATGGGGGTTTTAGGCCCCTGGAGGACACCATGtagcaccattgc
aatgtcttctagcattacatcacggacccaacagctgattggttgtgaca
agtgacgtattgactgattttatgtcacttacaaccaatcagctgttggg
ccCATTGTGTGATGTcaaagacattgcagtgatgcaaATCATGAATATGC
AAGAGGAAATCTACACGGCGTCAATTTCCAATAGAATTGATTTGAATTTT
GCTTTACATAAAACCTTTGATTTAAGCTTGATGGCTTCTCTGGGATCTTT
GTCCCTGtaaaaagggtttaaaatttgtaaattcaAAACTAGTTGCAACA
CGCTTTCATTTGTTCGGTCAATTTGTCTTGCTTTAAGAATGGcgttttaa
gtgctctttaaaCAGCATTGAGCTCTACCAATTCATAAAAAGATTctgaa
ataattttctttttcataccaCCAGGTGACATGATTGACCGTCTCCGAAT
CACCTACAACAGAACACGTCAAGCCGTCATCACCACAGAATTGACCGAAA
TCATCTCTGGTTGTGTTGCCCTAGAAACTGCTGACTAA Coding sequence (CDS) from alignment at sc0000228_pilon:434351..439288+ >XLOC_032180 ID=XLOC_032180|Name=XLOC_032180|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1512bp|location=Sequence derived from alignment at sc0000228_pilon:434351..439288+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAGATGGTGTCAGCTGCTAAATATTCACGTGCAGAACGTGAGCTGAA
ACCAGCCAGAGTCTATGGCACTGGAGCCAAAGATGCAGATGGTGTCAGCT
GCTAAATATTCACGTGCAGAACGTGAGCTGAAACCAGCCAGAGTCTATGG
CACTGGAGCCAAAGCATTATTTGAAAAAGCTGAATTGGAAAGTGACAAGA
CTCAACCTAACCATCTGATCATTGCTATTTCCTCTGATCGTGGTCTTTGT
GGTGGTATCCATTCTGGTATCTCCAAAGCCATTCGTGCCAAAACTGCTGA
CTCTGGTGTAGATACTAAATTAATTATATGCGGGGACAAAGCAAGAAGCA
TTTTACAAAGAACTCATACATTATTTGAAAAAGCTGAATTGGAAAGTGAC
AAGACTCAACCTAACCATCTGATCATTGCTATTTCCTCTGATCGTGGTCT
TTGTGGTGGTATCCATTCTGGTATCTCCAAAGCCATTCGTGCCAAAACTG
CTGACTCTGGTGTAGATACTAAATTAATTATATGCGGGGACAAAGCAAGA
AGCATTTTACAAAGAACTCATAGCAATGATATTCTGTTTCACATGAATGA
GTTGGGCCGTAAACCACCACTTTTTGAAGAAGCCTCATTTGTTGCGGAAC
AAGTTTTAGATTCTGGATATGAATTTGATTCTGGTGAAATGATGTTCAAT
AAATTCAAGCAATGATATTCTGTTTCACATGAATGAGTTGGGCCGTAAAC
CACCACTTTTTGAAGAAGCCTCATTTGTTGCGGAACAAGTTTTAGATTCT
GGATATGAATTTGATTCTGGTGAAATGATGTTCAATAAATTCAACTCTGT
TGTATCATACAGCGTTACTGAACAAGATATCTTCTCTTTCAACAGCTTGA
GTACTGCTGCTCTGTTGTATCATACAGCGTTACTGAACAAGATATCTTCT
CTTTCAACAGCTTGAGTACTGCTGAAACCATGTTACAATATGATGACGTA
GATGAAGATGTGTTGCGCAATTACCACGAATTCTCCCTTGCCAACATCGT
TTTCTATGGAATGAAAGAAAGCGCATGCTCAGAACAATCTGCAAGAATGA
CTGCTATGGACAATGCTACTAAGAATGCTGAAACCATGTTACAATATGAT
GACGTAGATGAAGATGTGTTGCGCAATTACCACGAATTCTCCCTTGCCAA
CATCGTTTTCTATGGAATGAAAGAAAGCGCATGCTCAGAACAATCTGCAA
GAATGACTGCTATGGACAATGCTACTAAGAATGCTGGTGACATGATTGAC
CGTCTCCGAATCACCTACAACAGAACACGTCAAGCCGTCATCACCACAGA
ATTGACCGAAATCATCTCTGGTTGTGTTGCCCTAGAAACTGCTGACTAAG
TGACATGATTGACCGTCTCCGAATCACCTACAACAGAACACGTCAAGCCG
TCATCACCACAGAATTGACCGAAATCATCTCTGGTTGTGTTGCCCTAGAA
ACTGCTGACTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000228_pilon | genome | sc0000228_pilon:434351..439288 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 646-756:4828 |
| Aaloc | 490-642:3807 |
| Aaloc | 424-486:3463 |
| Aaloc | 289-420:1173 |
| Aaloc | 85-285:719 |
| Aaloc | 1-81:1 |
|
