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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000306_pilon:307421..311794- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_032011 ID=XLOC_032011|Name=XLOC_032011|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4374bp|location=Sequence derived from alignment at sc0000306_pilon:307421..311794- (Clytia hemisphaerica_ch_hm2_pilon)
CAAATTATGATGAACTACCACCACGTTGTTGTTTTAGACGTCAATATCTT
GCAATCAAAACAAATCACGCAAAAGTTTTTACAAAATGAAAAAATCAACT
CCTCCTTTTGGTATAAAAACGATGCTAAGGCCAGTGAATTGGGAAAACAA
AAGAAGCTTTTCAAAAAATTTTTGGAAGCCAATCAAAACTCTAACAAGTT
TGGTTACCTTATTTCAATCAATTTACGAGACGAAGACCAACCAATCAGGG
TTCAAGCTAAAAGATCTGGTGTTGCTGACTCGTTGGATTTCATTATCCCT
GATGTACGTCAAATAGGAAAACCTAAAGTGACCTTTGTATCTTACGACCA
TTTCAAAATTTCCGTCACAAAACCAAGCAATGCATGGGTGACTCATTTCT
TGGTGGAATACTGGCCAATCATCGATGACAGCGAAGAATCTAAAACGTCG
CTTAAGTTTGCTTTCAGTCTGCAAAATACACAAAACGTCACCATCACTAA
CTTAAACTATTTGACTACATACGAAGTCCGTATCGTCCATGTGACAGAAT
TTGGTATTTCTCCAACCGGTGAAAAAGTCAGTGTGACAACTAAACCATCC
TCCGAACCAACCATACTGAAATTTCAAAGTTCTGAAAGCTCATTGAAGAT
ATCTTGGAGTGAACCAGTCTATCAAGCTAATGGTATCAAGATAGAGGATT
ATCGTGTTGTATTGAAAGGTAAGAATATTAGTTTAAAACTCAATGTTTTC
TAATTTTTCATAGTTTTCGTAAGCTCTAGCTATGTCCGCAGCATGACATT
ATTATTCACTCTCGTTGCTTCATTACATTTTTTTTTCATTCTTTTTCATC
AAAACACGGTCTTTCAATTCTCAAATGAGAATAAAAGTTTTCCTTAGAGA
GGCAAACGCATCAAAATAATTGCTAATTGTATCAGTCCATATAATTTCTA
TTACGTCCATGCCCGCATATATCTTAACTACTCTAAAGAATTTCAATGTG
CAAAAAAATCATAAAGTGGTTTAATTTTGATACTTTTTTTTCCGACAGAT
TCTGTTGGCCAAGTCGTTGCAGACCAACAGGTCCAAGATGTTACAAACAT
CAAGTTTGACAATCTTAATGCCGTCACCAAGTACATTGTAACCGTAAAAG
CAATTGCTGAATTTATTCGAAAAGATTCCGCCACCAACACCACCAAAAAG
ATCCAAGAATACAGCCATCCAGCTACCTTGATTGCCTTCACTGCTGCGAA
TCCTCTGAATCCAAATTCATTCCAAGCTAATGCTGATTATTACTCTGTTA
CACTCGATTTGGGGAAATCTAACATCACTCAAGTTCCAAGAGTCACTGGA
TATGTTGTCCGGTACAGTTTAATGGATTCCACTGGGCAAAACATAAAGCC
TGGAACTAGTCGAACACAAAGTTTCCCTGGCAACAATGATCCGAAGAAAA
TTATTGGCTTGGCATCAGGATTTACCTATGGACTCGAAGTTCAGGTGATT
CGATTTTATATTATTCCTAATATAACAAGATAAAACAATATTCCTAAATG
ATCTTATTGAATAGCTCCACAAAAACCACTTCTCTCAAGTATACTTCCCG
GGGGGGGCGTACTAGGGTTGCGAGCTGACAGGGGGGGGGGGTATTTTTGA
AATTTTCCTATTTCTCCTACCCTTAGTGAGACTGAAATTTGATTTTCTGA
TTTTTCCGACCATTTGCAGGACTTTGGAAATCTAAAAAGGTACCTTTAAG
GGCGGCACATTCCGTACCCTCCATTTGCCTAAGAACCCCCCCCCCCCGGG
TATTTTACCCAGTTTCATCTACTGAAGATCTTATCTTTATCACAAGCAAA
AAAATCTGCAAAGTTGGAAAAGAAAAGAATTACAAATTTTAGTTAGCCAA
AAACAGTAGAAATTCGCGTTTTTCTACTTGCTGTCTTCAGGAAATTTTCT
ACTTGCTTTCTTCAGGAAATTACAACAGTTGGGAAAAGTATTTTTTCATC
ACCTGTGTTCATAATTCGAACTGACCCAAGAGGTAAGAATTCGCACGCAA
TTACAGAACAATCTTATTTTTTATTGAATCAAACATAAAAGTTAAATTTT
CCGACATAAAATATTGATCGAATCATCAGGACCTTTGGAGAGATCCCAGC
TGGCATGGCAAACAACGTTGTCTCGACGTTCATCTAACGTTATATGAACG
TTGTGAGCGTTAATTAAACGTTGAAACAATGTTGCGTACCAGCTGGGATT
TTCATCTGTCAATTTGTTTGTCTTTGTTAAAATTATTATATCGAGAATTT
TATGAATTCCAAAGGAAAATTCTTTTCGGTATGTGGGTGCCCTAGGAGTT
CGGTTTTTTACACTTTCAAAGTCAATTATGTCATTCTAAGGGTCGCCTTT
TCAGCAAAAATCACTCTGTGTAAGAGTAACGGTTTTTTAATCCAATGTTT
ACTAAATTTCTAAGATTTTAGAAAAAATTATAATTAATAAACATATAATA
AGCATAGGTTATGCCTGGATGCTTTGAAAGCTACCTGTAGACAAATGTTT
CACATATTATGATTATTAAGAAGATTTTTAGTGCTCTATTTTCTATAATG
TAGTTACCAATGGAGGGTACAGCCAATGGACAAGCTGGTCTGTCTGTAAC
AGAATGTGTGGACCAGGTCAGCAAACAAGAAGTCGAACATGCACCAATCC
TGATCCTTCCAATGGTGGTACAAATTGTGAGAGTTTGGGACAGTCAAGTC
AAACTAAGAGTTGCAACTTGAAGTCTTGCTGTAAGGTTTTATCCAGCTCT
CATAAAGTTTTAACGCTAGACTTAAGACATTAGGATCTAAGGATCAAAAA
GTTCAACAATATAGTCCAATAAGGCTCAGAATATAGCCTGGAAGTCTGCC
AACCCAAATTGAAATGATTCGATTAAATTAAAGATATCGCCCGAAATCGA
CTTTCTCCCCAGAACTTTAAATCTTGAAAAACGTTAAAATAACCGTAGTT
CTCACTATATTTTTACCATGATTGTAGAACACCCTTGATTCACGCATTCG
CATAAGTTTCTTTTTCTAAATTTACAAAACCCGAATTATTAAGTAGATCA
GAGAAACTTTTTGGAAGAATTTTACGAAATTTAAGTACACAGTGATCAAA
CTTTTGATTGTAATTATCTAATTGTCTTTTCATTTTTAGTCGAGACAAAC
ATTCAAGAATGCTCATGGAGCCGTAATATTATGGTGCATGGAAGCGGCCC
AGTCAAGGTAAAGTAATCGTTATGGTATCTCTGACAGCAATCGAATCTTA
GTCGTCTCTAGGAGACAAAGTCGATATTTTTTAAATAAGGACATTCCTTC
CCAGTCAGCCTGTTTAGTAGAAAAATGCCATAGCAGATGCCAAAGGCAAC
ACCTTCTTTTCCCTGGGAAAAGTTGAGGATTCTTTTCTAGTCTTCGGTCG
AACGAATTAATATCTGTGGAAAGTAGCTGTAAGTCTGGGGAAAGAAACAG
CTCGTGCGCAATCACGTGACTTAAACACGTTTTTATATTCATTCTTAAAG
TATATTCAGTAGCGGAAAGACGTATAAAGATTATATCTAAAATATTCAAT
GTTTCAACGTTTTTACTGATACTCGTGATCCAGAACTATTAAGAGTACAG
AAGATTTTACAATATCATTGGTGCAGGCTAGAGCGAAAGCCATCGTGACG
TCGCTCGTACCCGATAATTTTTTCCCAATACTTTAGCTCCAGTTTAAACG
GCCGACATTAAGTCCCGTCTATTCTAATTGTGAATTAAAGTGGGCAGAAG
GTTGGCTATCTAAAGTCAATACCTTGCCCACTTTTGATGTCAGCGCAATG
TGTTCTTTCAATCTTTTCCAAAAATTTTAATTGCCAACTTTTTGATCACT
TTTTGTCTACTCTTGCAACTAGAATAGGCCTACGGTAAAAAGTTGGTCGT
CTAAACTAGAGCTTATTTATATTAATATTTTGTTTTCACTTTACAGTATT
GTTATTTCAATAAAAAACACTCCACAACATCTTTATTGGTCTCTGTGAAA
ACGATGGTAACTGTTATTGGAATATCGAGGATTTTCGCAAATTGTATAAG
ATATTATGTCACTTTCAATGGAAACGAATGTTCTACGCCGATAGACCAAG
CAATTCAAATCGGAAGCTACAAAAATAAATTGACCATGCCTATCACAATT
CGAGGCATCTGTAAACTCACCAATAGGTGTGGTAATATCAAAGTGGGATT
AAACGTTAATGAATGCGATTCAGGAGTGTATACCGACGACACAGATTATG
GTCGTTACGCCACCAGCAGTATAATTATAGAAGAGGTCGAAAATGCACGG
CTTACTACCGCTCGTACATCTTAA Coding sequence (CDS) from alignment at sc0000306_pilon:307421..311794- >XLOC_032011 ID=XLOC_032011|Name=XLOC_032011|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3708bp|location=Sequence derived from alignment at sc0000306_pilon:307421..311794- (Clytia hemisphaerica_ch_hm2_pilon)
CAAATTATGATGAACTACCACCACGTTGTTGTTTTAGACGTCAATATCTT
GCAATCAAAACAAATCACGCAAAAGTTTTTACAAAATGAAAAAATCAACT
CCTCCTTTTGGTATAAAAACGATGCTAAGGCCAGTGAATTGGGAAAACAA
AAGAAGCTTTTCAAAAAATTTTTGGAAGCCAATCAAAACTCTAACAAGTT
TGGTTACCTTATTTCAATCAATTTACGAGACGAAGACCAACCAATCAGGG
TTCAAGCTAAAAGATCTGGTGTTGCTGACTCGTTGGATTTCATTATCCCT
GATGTACGTCAAATAGGAAAACCTAAAGTGACCTTTGTATCTTACGACCA
TTTCAAAATTTCCGTCACAAAACCAAGCAATGCATGGGTGACTCATTTCT
TGGTGGAATACTGGCCAATCATCGATGACAGCGAAGAATCTAAAACGTCG
CTTAAGTTTGCTTTCAGTCTGCAAAATACACAAAACGTCACCATCACTAA
CTTAAACTATTTGACTACATACGAAGTCCGTATCGTCCATGTGACAGAAT
TTGGTATTTCTCCAACCGGTGAAAAAGTCAGTGTGACAACTAAACCATCC
TCCGAACCAACCATACTGAAATTTCAAAGTTCTGAAAGCTCATTGAAGAT
ATCTTGGAGTGAACCAGTCTATCAAGCTAATGGTATCAAGATAGAGGATT
ATCGTGTTGTATTGAAAGCAAATTATGATGAACTACCACCACGTTGTTGT
TTTAGACGTCAATATCTTGCAATCAAAACAAATCACGCAAAAGTTTTTAC
AAAATGAAAAAATCAACTCCTCCTTTTGGTATAAAAACGATGCTAAGGCC
AGTGAATTGGGAAAACAAAAGAAGCTTTTCAAAAAATTTTTGGAAGCCAA
TCAAAACTCTAACAAGTTTGGTTACCTTATTTCAATCAATTTACGAGACG
AAGACCAACCAATCAGGGTTCAAGCTAAAAGATCTGGTGTTGCTGACTCG
TTGGATTTCATTATCCCTGATGTACGTCAAATAGGAAAACCTAAAGTGAC
CTTTGTATCTTACGACCATTTCAAAATTTCCGTCACAAAACCAAGCAATG
CATGGGTGACTCATTTCTTGGTGGAATACTGGCCAATCATCGATGACAGC
GAAGAATCTAAAACGTCGCTTAAGTTTGCTTTCAGTCTGCAAAATACACA
AAACGTCACCATCACTAACTTAAACTATTTGACTACATACGAAGTCCGTA
TCGTCCATGTGACAGAATTTGGTATTTCTCCAACCGGTGAAAAAGTCAGT
GTGACAACTAAACCATCCTCCGAACCAACCATACTGAAATTTCAAAGTTC
TGAAAGCTCATTGAAGATATCTTGGAGTGAACCAGTCTATCAAGCTAATG
GTATCAAGATAGAGGATTATCGTGTTGTATTGAAAGATTCTGTTGGCCAA
GTCGTTGCAGACCAACAGGTCCAAGATGTTACAAACATCAAGTTTGACAA
TCTTAATGCCGTCACCAAGTACATTGTAACCGTAAAAGCAATTGCTGAAT
TTATTCGAAAAGATTCCGCCACCAACACCACCAAAAAGATCCAAGAATAC
AGCCATCCAGCTACCTTGATTGCCTTCACTGCTGCGAATCCTCTGAATCC
AAATTCATTCCAAGCTAATGCTGATTATTACTCTGTTACACTCGATTTGG
GGAAATCTAACATCACTCAAGTTCCAAGAGTCACTGGATATGTTGTCCGG
TACAGTTTAATGGATTCCACTGGGCAAAACATAAAGCCTGGAACTAGTCG
AACACAAAGTTTCCCTGGCAACAATGATCCGAAGAAAATTATTGGCTTGG
CATCAGGATTTACCTATGGACTCGAAGTTCAGATTCTGTTGGCCAAGTCG
TTGCAGACCAACAGGTCCAAGATGTTACAAACATCAAGTTTGACAATCTT
AATGCCGTCACCAAGTACATTGTAACCGTAAAAGCAATTGCTGAATTTAT
TCGAAAAGATTCCGCCACCAACACCACCAAAAAGATCCAAGAATACAGCC
ATCCAGCTACCTTGATTGCCTTCACTGCTGCGAATCCTCTGAATCCAAAT
TCATTCCAAGCTAATGCTGATTATTACTCTGTTACACTCGATTTGGGGAA
ATCTAACATCACTCAAGTTCCAAGAGTCACTGGATATGTTGTCCGGTACA
GTTTAATGGATTCCACTGGGCAAAACATAAAGCCTGGAACTAGTCGAACA
CAAAGTTTCCCTGGCAACAATGATCCGAAGAAAATTATTGGCTTGGCATC
AGGATTTACCTATGGACTCGAAGTTCAGGAAATTACAACAGTTGGGAAAA
GTATTTTTTCATCACCTGTGTTCATAATTCGAACTGACCCAAGAGGAAAT
TACAACAGTTGGGAAAAGTATTTTTTCATCACCTGTGTTCATAATTCGAA
CTGACCCAAGAGTTACCAATGGAGGGTACAGCCAATGGACAAGCTGGTCT
GTCTGTAACAGAATGTGTGGACCAGGTCAGCAAACAAGAAGTCGAACATG
CACCAATCCTGATCCTTCCAATGGTGGTACAAATTGTGAGAGTTTGGGAC
AGTCAAGTCAAACTAAGAGTTGCAACTTGAAGTCTTGCTTTACCAATGGA
GGGTACAGCCAATGGACAAGCTGGTCTGTCTGTAACAGAATGTGTGGACC
AGGTCAGCAAACAAGAAGTCGAACATGCACCAATCCTGATCCTTCCAATG
GTGGTACAAATTGTGAGAGTTTGGGACAGTCAAGTCAAACTAAGAGTTGC
AACTTGAAGTCTTGCTTCGAGACAAACATTCAAGAATGCTCATGGAGCCG
TAATATTATGGTGCATGGAAGCGGCCCAGTCAAGTCGAGACAAACATTCA
AGAATGCTCATGGAGCCGTAATATTATGGTGCATGGAAGCGGCCCAGTCA
AGTATTGTTATTTCAATAAAAAACACTCCACAACATCTTTATTGGTCTCT
GTGAAAACGATGGTAACTGTTATTGGAATATCGAGGATTTTCGCAAATTG
TATAAGATATTATGTCACTTTCAATGGAAACGAATGTTCTACGCCGATAG
ACCAAGCAATTCAAATCGGAAGCTACAAAAATAAATTGACCATGCCTATC
ACAATTCGAGGCATCTGTAAACTCACCAATAGGTGTGGTAATATCAAAGT
GGGATTAAACGTTAATGAATGCGATTCAGGAGTGTATACCGACGACACAG
ATTATGGTCGTTACGCCACCAGCAGTATAATTATAGAAGAGGTCGAAAAT
GCACGGCTTACTACCGCTCGTACATCTTAATATTGTTATTTCAATAAAAA
ACACTCCACAACATCTTTATTGGTCTCTGTGAAAACGATGGTAACTGTTA
TTGGAATATCGAGGATTTTCGCAAATTGTATAAGATATTATGTCACTTTC
AATGGAAACGAATGTTCTACGCCGATAGACCAAGCAATTCAAATCGGAAG
CTACAAAAATAAATTGACCATGCCTATCACAATTCGAGGCATCTGTAAAC
TCACCAATAGGTGTGGTAATATCAAAGTGGGATTAAACGTTAATGAATGC
GATTCAGGAGTGTATACCGACGACACAGATTATGGTCGTTACGCCACCAG
CAGTATAATTATAGAAGAGGTCGAAAATGCACGGCTTACTACCGCTCGTA
CATCTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000306_pilon | genome | sc0000306_pilon:307421..311794 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1474-1851:379 |
| Aaloc | 1408-1473:1184 |
| Aaloc | 1231-1404:1770 |
| Aaloc | 1162-1227:2410 |
| Aaloc | 850-1161:3193 |
| Aaloc | 721-849:3325 |
| Aaloc | 1-717:4375 |
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