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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000306_pilon:268674..272126+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_031992 ID=XLOC_031992|Name=XLOC_031992|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3453bp|location=Sequence derived from alignment at sc0000306_pilon:268674..272126+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCATCAGCGAACAACGAGCCAAGCAGTTCATTGGGTATTGCAAACAA
AGCCACCAATGTGGTCTTTCAAAAAGGTCACGTGACACGCAAGAAACGTG
GACAAGTGTTGGGTCAGTCACATGGTTTTAGGGGATGTACTATTTGGTTT
ACAGGTAAACAGTGATAATTcatttatatatacttttaatCCATCAATCC
TTTTGGattattaaatttcaatttttcccgACTTCGGTTCGATTTGAAAt
gtaaattttataagaattagcCTTTGTTTTCTGATATTTTCAAAGGTTGT
AAGTTGAACACATCATTACGATTAACACACCTATCTCACCGACTTGATTG
AACTTTGCAATTAAACTAATCCAATTCCAAATTATTCGATCTCAGGTTCC
AATCTTCGTCTTTTTATTCTTTCTATTAAACTATCTGTCTATAGGTTTAT
CGGGAGCTGGAAAGACAACTATCAGTTTCGCACTAGAAGAATATTTATGT
TTAAGGGGAATTCCAACCTATGGTCTGGATGGGGATAACATGAGAACTGG
TCTCAATAAAAATTTAGGGTTTTCCCCTGAAGACCGTGAAGAAAATATCC
GTCGTGTCGGGGAAGTTGCTAAATTATTTGCCGACGCTGGTATAGTTTGT
TTGTCCAGTTTTATTTCACCTTACGAAAAAGATCGTTTGAAAGCACGTAA
ATTGCATGAAGAAGCTGGCCTCCCGTTCTTCGAGTGCTACGTCGATACGC
CGTTAAACGTATGCGAGACGCGCGACGTGAAAGGTCTGTATAAGAAGGCC
AGAGACGGCGTCATTAAAGGATTTACCGGTATCGATTCACCGTATCAAGC
ACCGAGCAATCCAGAGCTTGTTTTGAAAGCTGGccaacaaagcattgatg
aatGCGTCCAAGAGATTGTGAAATTACTGGAGAAGAATCACATTGTACCT
CTCACAGTCATCAACGAAGTCCGTGAACTCTTTGTCAATGATGACGAGTT
ACACGAACAAAAAGTGATCGCTGAATCATTACCCAGTCTCCCTATCAATA
AAGTTGACATGCAATGGCTTCAGGTGTTAGCTGAAGGTTGGGCGTCACCC
TTGGAAGGGTTTATGTATGAGCGCGAATATCTACAGACGCTTCATTTCAA
TTGTTTACAAGATTCAGATAATATCAATCAATCAGTTCCCATTGTATTAC
CTGTCACTACTGAACTAAAAGAATCACTGGAGAATAAAGGTAAGCTTTTG
ttttacaatgaagtgaatacagtcgctctcatgttgtcttcgGACAACag
aagtttgctcgctgtttttaatgatttttcgaaatttcgacgtggaaaaa
aagtcagttttttggaaataactttcgaactactttttcaaactttatgt
atgatagctcaaaattcaagttagagcatcctttatacaataaaaaaaga
atgaacaaaaaatgaaaatcctgaacctcacaatatctcgacaaacctgt
atacttttttttggtgcacccggtacacGAAGCGAATGTGTCCAATAAAC
TTGAAACAAGGTTATGTTTCAGCTTTTGGTCTTTGCGCAAGCTGAGCCGA
ATGGTTTTACTAGACAACTTACTGTTTAAATGTTGTTTTCCTTCTAACAG
GAGAAATCGCACTTGAATATGACGGTCGTCGTGTAGCCATCCTCGGTGAA
ACAGAGTTCTTCCCACATCGTAAAGAGGAGAGATGTTGTCGACAATTCGG
TACACGAAGCGTGAAACAACCTcatattgaaatgattttagCTGCAGGTG
ATTGGTGTGTTGGTGGCAAATTACGTGTCTTAGGTAAGTTGATTGATTTG
TGGTGATTTTTAACTGGTTCTTGAATTTTAGTCGAATATAATTACTAGGC
TTTAAAACTTCTGTCGTAGTGACTCGGCGGAAATTATTTAGCCCATAATG
ATAAAATCAAAGAGCTACTGATGGGAAATCGCTTTTATCGTTTTTAATTA
GTGGGAACTTTGCACTATATACTGTCTTATTAGCTTCCCAAAATTACAAT
GCCCTCCCCAATTGGGATGAAATTTAAGTGACCTTTCTAAGGGGATCACA
TTTTTCTTACCATTGACAATCTTTTGAgccatttttccagtgggggtGTT
TAGAACATGTGCTTTATAACCTCAATTGGTTGTTTATGGAGcagtctttc
ttttcttcttcttttgtaCGTTAAAGTAATATATATGAGAAATACAGAAA
ttttaatattgaaaaattttttatgttttttctttagGTAAAATTGAATG
GAACGATGGTCTTGATGAATATCGATTGAAACCAAACCAACTTCGCAAGA
AATTTGCTGAAATGAAGGCGGATGCTGTGTTCGCTTTCCAATTACGTAAT
CCTGTGCACAACGGACACGCCCTTTTGATGCGAGACACCAAACGGAACTT
GGTTGAACGTGGTTACAAAAAACCGGTCTTACTTTTACATCCTTTGGGTG
GTTGGACTAAAAATGATGACGTACCTTTGCCAATTCGTATTAAGCAGCAT
TTGGCGGTCTTGAAAGAAGGTGTATTAGATCCAGAGTCTACTGTCTTAGG
TAGGTGGCCTCTTATTGTCAGCCAACTGAGTTAAAGCTGCATGATtagat
attttgatatttctccATCACAGCGTTTATATACCCaaagaattttgaag
aaatCTCAAGAGCTTCTAATGATTTCAGTGGTGTggttatttgttttgtt
tttttcactcTAATGTGTAAAAAACTCCAAAACTCTGTTTCATCGTTAAT
GCATGTCTCAGAGGTCTTTTAACCAGATTTCAATCTATTTAATCTTAACT
TGTTACTTACCTGCTTACTTTCCCTTTTATCTATatccttataaaaagcg
tgtacataTACTTCATAGTCATAGTGTAATCTGTGATGTGATTAGTCTAA
ATTCGATCTTGGGAATTTACTCTGTATGGTTTTCTGCTGCCCAGAATTAA
TGACTAGTTTATTAAATCCTCTTTTAATTTCATATTTCAGCTATCTTTCC
GTCTCCAATGATGTATGCTGGCCCAACAGAAGTCCAATGGCATTGCAAAG
CACGAATTGCCGCAGGAGCTACATTCTACATTGTTGGTCGTGATCCAGCC
GGTATGGGACATCCTGACCAACCTGGGGATCTGTACGATGCCACACACGG
ACGTAAGGTCCTCACCATGGCTCCTGGTCTCGTTCAGTTAGAGATTGTTC
CTTTCAAAGTTGCTGCTTACAATAAAGTAAAACATCAAATGACATTTTTT
GATCCAGAAAAGAAGGaagaatttgaatttatttctgGTACTAAGATGAG
AGCTTTTGCCAGAAATGGTGATACTCCACCAGATGGCTTCATGGCACCTA
CCGCTTGGAAAGTGTTAGCCGATTATTACCAATCAATCGTCAAGaatgat
taa Coding sequence (CDS) from alignment at sc0000306_pilon:268674..272126+ >XLOC_031992 ID=XLOC_031992|Name=XLOC_031992|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3714bp|location=Sequence derived from alignment at sc0000306_pilon:268674..272126+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCATCAGCGAACAACGAGCCAAGCAGTTCATTGGGTATTGCAAACAA
AGCCACCAATGTGGTCTTTCAAAAAGGTCACGTGACACGCAAGAAACGTG
GACAAGTGTTGGGTCAGTCACATGGTTTTAGGGGATGTACTATTTGGTTT
ACAGATGGCATCAGCGAACAACGAGCCAAGCAGTTCATTGGGTATTGCAA
ACAAAGCCACCAATGTGGTCTTTCAAAAAGGTCACGTGACACGCAAGAAA
CGTGGACAAGTGTTGGGTCAGTCACATGGTTTTAGGGGATGTACTATTTG
GTTTACAGGTTTATCGGGAGCTGGAAAGACAACTATCAGTTTCGCACTAG
AAGAATATTTATGTTTAAGGGGAATTCCAACCTATGGTCTGGATGGGGAT
AACATGAGAACTGGTCTCAATAAAAATTTAGGGTTTTCCCCTGAAGACCG
TGAAGAAAATATCCGTCGTGTCGGGGAAGTTGCTAAATTATTTGCCGACG
CTGGTATAGTTTGTTTGTCCAGTTTTATTTCACCTTACGAAAAAGATCGT
TTGAAAGCACGTAAATTGCATGAAGAAGCTGGCCTCCCGTTCTTCGAGTG
CTACGTCGATACGCCGTTAAACGTATGCGAGACGCGCGACGTGAAAGGTC
TGTATAAGAAGGCCAGAGACGGCGTCATTAAAGGATTTACCGGTATCGAT
TCACCGTATCAAGCACCGAGCAATCCAGAGCTTGTTTTGAAAGCTGGcca
acaaagcattgatgaatGCGTCCAAGAGATTGTGAAATTACTGGAGAAGA
ATCACATTGTACCTCTCACAGTCATCAACGAAGTCCGTGAACTCTTTGTC
AATGATGACGAGTTACACGAACAAAAAGTGATCGCTGAATCATTACCCAG
TCTCCCTATCAATAAAGTTGACATGCAATGGCTTCAGGTGTTAGCTGAAG
GTTGGGCGTCACCCTTGGAAGGGTTTATGTATGAGCGCGAATATCTACAG
ACGCTTCATTTCAATTGTTTACAAGATTCAGATAATATCAATCAATCAGT
TCCCATTGTATTACCTGTCACTACTGAACTAAAAGAATCACTGGAGAATA
AAGGTTTATCGGGAGCTGGAAAGACAACTATCAGTTTCGCACTAGAAGAA
TATTTATGTTTAAGGGGAATTCCAACCTATGGTCTGGATGGGGATAACAT
GAGAACTGGTCTCAATAAAAATTTAGGGTTTTCCCCTGAAGACCGTGAAG
AAAATATCCGTCGTGTCGGGGAAGTTGCTAAATTATTTGCCGACGCTGGT
ATAGTTTGTTTGTCCAGTTTTATTTCACCTTACGAAAAAGATCGTTTGAA
AGCACGTAAATTGCATGAAGAAGCTGGCCTCCCGTTCTTCGAGTGCTACG
TCGATACGCCGTTAAACGTATGCGAGACGCGCGACGTGAAAGGTCTGTAT
AAGAAGGCCAGAGACGGCGTCATTAAAGGATTTACCGGTATCGATTCACC
GTATCAAGCACCGAGCAATCCAGAGCTTGTTTTGAAAGCTGGccaacaaa
gcattgatgaatGCGTCCAAGAGATTGTGAAATTACTGGAGAAGAATCAC
ATTGTACCTCTCACAGTCATCAACGAAGTCCGTGAACTCTTTGTCAATGA
TGACGAGTTACACGAACAAAAAGTGATCGCTGAATCATTACCCAGTCTCC
CTATCAATAAAGTTGACATGCAATGGCTTCAGGTGTTAGCTGAAGGTTGG
GCGTCACCCTTGGAAGGGTTTATGTATGAGCGCGAATATCTACAGACGCT
TCATTTCAATTGTTTACAAGATTCAGATAATATCAATCAATCAGTTCCCA
TTGTATTACCTGTCACTACTGAACTAAAAGAATCACTGGAGAATAAAGGA
GAAATCGCACTTGAATATGACGGTCGTCGTGTAGCCATCCTCGGTGAAAC
AGAGTTCTTCCCACATCGTAAAGAGGAGAGATGTTGTCGACAATTCGGTA
CACGAAGCGTGAAACAACCTcatattgaaatgattttagCTGCAGGTGAT
TGGTGTGTTGGTGGCAAATTACGTGTCTTAGGAGAAATCGCACTTGAATA
TGACGGTCGTCGTGTAGCCATCCTCGGTGAAACAGAGTTCTTCCCACATC
GTAAAGAGGAGAGATGTTGTCGACAATTCGGTACACGAAGCGTGAAACAA
CCTcatattgaaatgattttagCTGCAGGTGATTGGTGTGTTGGTGGCAA
ATTACGTGTCTTAGGTAAAATTGAATGGAACGATGGTCTTGATGAATATC
GATTGAAACCAAACCAACTTCGCAAGAAATTTGCTGAAATGAAGGCGGAT
GCTGTGTTCGCTTTCCAATTACGTAATCCTGTGCACAACGGACACGCCCT
TTTGATGCGAGACACCAAACGGAACTTGGTTGAACGTGGTTACAAAAAAC
CGGTCTTACTTTTACATCCTTTGGGTGGTTGGACTAAAAATGATGACGTA
CCTTTGCCAATTCGTATTAAGCAGCATTTGGCGGTCTTGAAAGAAGGTGT
ATTAGATCCAGAGTCTACTGTCTTAGGTAAAATTGAATGGAACGATGGTC
TTGATGAATATCGATTGAAACCAAACCAACTTCGCAAGAAATTTGCTGAA
ATGAAGGCGGATGCTGTGTTCGCTTTCCAATTACGTAATCCTGTGCACAA
CGGACACGCCCTTTTGATGCGAGACACCAAACGGAACTTGGTTGAACGTG
GTTACAAAAAACCGGTCTTACTTTTACATCCTTTGGGTGGTTGGACTAAA
AATGATGACGTACCTTTGCCAATTCGTATTAAGCAGCATTTGGCGGTCTT
GAAAGAAGGTGTATTAGATCCAGAGTCTACTGTCTTAGCTATCTTTCCGT
CTCCAATGATGTATGCTGGCCCAACAGAAGTCCAATGGCATTGCAAAGCA
CGAATTGCCGCAGGAGCTACATTCTACATTGTTGGTCGTGATCCAGCCGG
TATGGGACATCCTGACCAACCTGGGGATCTGTACGATGCCACACACGGAC
GTAAGGTCCTCACCATGGCTCCTGGTCTCGTTCAGTTAGAGATTGTTCCT
TTCAAAGTTGCTGCTTACAATAAAGTAAAACATCAAATGACATTTTTTGA
TCCAGAAAAGAAGGaagaatttgaatttatttctgGTACTAAGATGAGAG
CTTTTGCCAGAAATGGTGATACTCCACCAGATGGCTTCATGGCACCTACC
GCTTGGAAAGTGTTAGCCGATTATTACCAATCAATCGTCAAGaatgatta
aCTATCTTTCCGTCTCCAATGATGTATGCTGGCCCAACAGAAGTCCAATG
GCATTGCAAAGCACGAATTGCCGCAGGAGCTACATTCTACATTGTTGGTC
GTGATCCAGCCGGTATGGGACATCCTGACCAACCTGGGGATCTGTACGAT
GCCACACACGGACGTAAGGTCCTCACCATGGCTCCTGGTCTCGTTCAGTT
AGAGATTGTTCCTTTCAAAGTTGCTGCTTACAATAAAGTAAAACATCAAA
TGACATTTTTTGATCCAGAAAAGAAGGaagaatttgaatttatttctgGT
ACTAAGATGAGAGCTTTTGCCAGAAATGGTGATACTCCACCAGATGGCTT
CATGGCACCTACCGCTTGGAAAGTGTTAGCCGATTATTACCAATCAATCG
TCAAGaatgattaa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000306_pilon | genome | sc0000306_pilon:268674..272126 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1447-1857:3043 |
| Aaloc | 1135-1443:2290 |
| Aaloc | 952-1131:1653 |
| Aaloc | 157-948:447 |
| Aaloc | 1-153:1 |
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