XLOC_031976 (mRNA) -

Overview
NameXLOC_031976
Unique NameXLOC_031976
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000757_pilon:19116..20193+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031976 ID=XLOC_031976|Name=XLOC_031976|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1078bp|location=Sequence derived from alignment at sc0000757_pilon:19116..20193+ (Clytia hemisphaerica_ch_hm2_pilon)
AAGAATGTAATGCGAAAAGATCCATTGCTTTTTTCTCGAAGAAGACGGAG AAGAAGAAGATGTGCAAGTCCTGCTAAACAACGTAAGGATTACCAAACAT TTCCCCGACAGATTTTTCTCTGCCCGACAATTCGCTGACGAACGTTTCTC CAAACGGACTGAACTGAATGAACTTAAAATGAACGTAAAACGAGTCCCTA CTTTTCCCTGACGGATGCTTCCCTGAATTTCGTTCTTCGGGAATCATCGG AAGAGAATCTTCATTGTTTATACTATGAAGTGATACAATCGCTCTCATAT TGTCTTGGAAAATCAACGGATCCtggcgagactcgaactcacaaccatgc cattcgcaGGAATTTGttctaccattgagctacgggtccgAACCTAAGGA CTCAATTGCTTAATTCTTTATACTAGTATTCATATTCAATTATTCGTTTT GCGTTTAGCTTGCTATGTGGAAACCAATGGCTGTGGATCGggcattttca caaaaattccatACACTTACAAGAAATTGTTGACTCCTGCATGTAACAAG CATGATGTTTGTTTCCGTTGTGTAAGTTGATGAAACATCCATTGCAAAAA TACTTGCGCTTCCAAGCTCAATATCGCTCttccaaaagcaaaaaaaggac TAATTTTGAAAAGCGGGAACTTTAAAAAGCTTACGAGTGGTTAATTGTTC AGCCTCGTGGgttatgaattttttcttttaaagaaatttccTTGTGCCAG ACCCGGTAGAAGCGGGAAGACTGGGGAGACTCGATTCTTAATTTTCTAAA CTAAATGTTAAAGAATACActtctttaattttttgcagGGCCAGAAATAT AGTTGGTCACGAAAAGCTTGTGATGAAACCTTCAGGAAAGACATGAACCG ATTATGCAGATGCAAGTTGACTGGATTGAAAGTTGTACTCCAACCACACT GTTATAAAAGAGCGTTGGAGATGTATGGCATTGTACGATTATTTGGGAAG CCTTACTTTAGAGATCCTGCTGAAGATTGGTGCAAAAGTTGTGTGGTCCC ATATGGTAGCCCAAATTATACTGTTTGA

Coding sequence (CDS) from alignment at sc0000757_pilon:19116..20193+

>XLOC_031976 ID=XLOC_031976|Name=XLOC_031976|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=870bp|location=Sequence derived from alignment at sc0000757_pilon:19116..20193+ (Clytia hemisphaerica_ch_hm2_pilon)
AAGAATGTAATGCGAAAAGATCCATTGCTTTTTTCTCGAAGAAGACGGAG
AAGAAGAAGATGTGCAAGTCCTGCTAAACAACAAGAATGTAATGCGAAAA
GATCCATTGCTTTTTTCTCGAAGAAGACGGAGAAGAAGAAGATGTGCAAG
TCCTGCTAAACAACCTTGCTATGTGGAAACCAATGGCTGTGGATCGggca
ttttcacaaaaattccatACACTTACAAGAAATTGTTGACTCCTGCATGT
AACAAGCATGATGTTTGTTTCCGTTGTCTTGCTATGTGGAAACCAATGGC
TGTGGATCGggcattttcacaaaaattccatACACTTACAAGAAATTGTT
GACTCCTGCATGTAACAAGCATGATGTTTGTTTCCGTTGTGGCCAGAAAT
ATAGTTGGTCACGAAAAGCTTGTGATGAAACCTTCAGGAAAGACATGAAC
CGATTATGCAGATGCAAGTTGACTGGATTGAAAGTTGTACTCCAACCACA
CTGTTATAAAAGAGCGTTGGAGATGTATGGCATTGTACGATTATTTGGGA
AGCCTTACTTTAGAGATCCTGCTGAAGATTGGTGCAAAAGTTGTGTGGTC
CCATATGGTAGCCCAAATTATACTGTTTGAGGCCAGAAATATAGTTGGTC
ACGAAAAGCTTGTGATGAAACCTTCAGGAAAGACATGAACCGATTATGCA
GATGCAAGTTGACTGGATTGAAAGTTGTACTCCAACCACACTGTTATAAA
AGAGCGTTGGAGATGTATGGCATTGTACGATTATTTGGGAAGCCTTACTT
TAGAGATCCTGCTGAAGATTGGTGCAAAAGTTGTGTGGTCCCATATGGTA
GCCCAAATTATACTGTTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_031976XLOC_031976-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000757_pilongenomesc0000757_pilon:19116..20193 +
Properties
Property NameValue
Aaloc196-435:839
Aaloc85-195:461
Aaloc1-81:1