XLOC_031974.5 (mRNA) -

Overview
NameXLOC_031974.5
Unique NameXLOC_031974.5
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000156_pilon:412169..412989+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031974.5 ID=XLOC_031974.5|Name=XLOC_031974.5|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=821bp|location=Sequence derived from alignment at sc0000156_pilon:412169..412989+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTATCAAAGGAAGATTTCAAGTCACTAGGGCTTACAGATAATTCTAC TATCATGAGATTGAGAATTAAATGTTGTTCATTTGGTGGTGAAAGTCCAG GTAAAGTTTTGACAAATGGTGcaccaaaatttttaattccTAAACAAGTA CTTGAAAACTTTCTGGAAGATGGATGTTTAATTGAAGAAATAGCTAACAT GCTGAATATTTCTGTACGCACTATTTACAGGCGAATGGAAGACTATGGTT TATCAAAACATAAGTTTCTGAGATTAATGAGGAGGATTTAGACATCTTGT TGATAAGACTTGTTGAAGAATTCCCTCATTGTGGAGAGGTAATGCTAAGA GAATTATTAAAGGAAAGAAGCATCAAAATTACCAGACAAACTTTGCGAGA CAGCTTGAACCGGATTGACGAAAATGGTAGTCTAAAGATGAGGAAGAAAA AGAGTTTACACCGTAGAGTTTACAGTGTACAGGGACCAAATCATTTGTGG CATCTGGATACAAACCATAAACTTGTAAGGTGGAATTTTATCATAACTGG TATAGTTGACGGTTTTAGTCGTTTACCTGTAGGTTTGTATTGCACCAATA ACAACAAGGCTTTAACTATTTTGAGTTGCTTTCAAGCTTCTGTTGAAGAG TATGGGTTGCCCAGCAGAGTGCGTGCGGACAAAgggaaagaaaatgtttt ggtgGCTGATTATATGATCGAGAGAAGAGGGGTTGGTAGGAAAAGTATGA TTACTGGAAAGAGTACTCATAATCAGAGAGTTGAAAGATTGTGGCGCGAT GTGTATACTGGTGTTCTCTCT

Coding sequence (CDS) from alignment at sc0000156_pilon:412169..412989+

>XLOC_031974.5 ID=XLOC_031974.5|Name=XLOC_031974.5|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=690bp|location=Sequence derived from alignment at sc0000156_pilon:412169..412989+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTATCAAAGGAAGATTTCAAGTCACTAGGGCTTACAGATGTTATCAA
AGGAAGATTTCAAGTCACTAGGGCTTACAGATAAACTTGTAAGGTGGAAT
TTTATCATAACTGGTATAGTTGACGGTTTTAGTCGTTTACCTGTAGGTTT
GTATTGCACCAATAACAACAAGGCTTTAACTATTTTGAGTTGCTTTCAAG
CTTCTGTTGAAGAGTATGGGTTGCCCAGCAGAGTGCGTGCGGACAAAggg
aaagaaaatgttttggtgGCTGATTATATGATCGAGAGAAGAGGGGTTGG
TAGGAAAAGTATGATTACTGGAAAGAGTACTCATAATCAGAGAGTTGAAA
GATTGTGGCGCGATGTGTATACTGGTGTTCTCTCTATAAACTTGTAAGGT
GGAATTTTATCATAACTGGTATAGTTGACGGTTTTAGTCGTTTACCTGTA
GGTTTGTATTGCACCAATAACAACAAGGCTTTAACTATTTTGAGTTGCTT
TCAAGCTTCTGTTGAAGAGTATGGGTTGCCCAGCAGAGTGCGTGCGGACA
AAgggaaagaaaatgttttggtgGCTGATTATATGATCGAGAGAAGAGGG
GTTGGTAGGAAAAGTATGATTACTGGAAAGAGTACTCATAATCAGAGAGT
TGAAAGATTGTGGCGCGATGTGTATACTGGTGTTCTCTCT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_031974.5XLOC_031974.5-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000156_pilongenomesc0000156_pilon:412169..412989 +
Properties
Property NameValue
Aaloc43-345:519
Aaloc1-39:1