|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000329_pilon:152616..159503- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_031936 ID=XLOC_031936|Name=XLOC_031936|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6888bp|location=Sequence derived from alignment at sc0000329_pilon:152616..159503- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGAAAAGAAGACAAAGCAGTTCTCTCACACAGCGAAGATGAAGAATC
AGACAGCGAAAATGAGGTTTGCTTTTCTGCATTGTTTTTTCTATTGCTAT
CAACAACAAATGCGGTCCAATTATCTTATTCGATTGTATAAAGATTGAAG
ATTAAGTGGCACTTAACATGAAGATATTAAATAGTTTAGTAGTTTTTCTA
TTCCACACTTAAAGGGCCTAATGTAATAAGATCCAAAAATGTCTAAAGTG
AGTAGATAGTTTGATAGTTTTTTTTTTATTCAAGTTGCTTTTGTGTGTTG
TCACATTTCTAAACTTCAACTAAGAATCGGACTTGCTTATAAACTGGAGT
ATTTTTTCATAAATTTGGTAAATGTTTTATCTACAATAAATTAAAAATCA
ATATATGGCCTTTTTCAGTTCTTGGAGGAGAATGAACGTATTTTGGGTGA
GGATGAACCAACCGAGAAGAGAGAATTGATCAACAACCAAGTAAGCCTTG
TTTTTGTCTATTCTCAGTTTTCTTAGTGTTCTGGAATGTTGGAATGTTTG
ATGTGAAGAACAAAAAGCTAATGATGTAACAAGTTGGAATTTGTGTTTTA
GATAGTCAAACAGTATAAGAAGAAAATTTTCTAAATACTATTCCCCCTTG
GCTTTTGGATTTTTCTCTCTCCTCTTCTTTTACCCCCCCCCCCTCTAGAT
TTACTCCAATTTTCTGGAAAAATTGTTTTACAATATACCTATTTATCAGT
GAATTTTCAATGTACTGTAACACACCATCATTATACTCAATGTTTTACTG
TTCCTAAGGAATTGATGAAAGTAAGACTTGAAGAATTGAAGAAAGAAATT
GATTGGATTGAACGTATGGATGTGACGGTTGACCTCTCTGATTTGCCAGG
TAACTATGTTCAACTGGATGATAAACCCCCTAGGCTATATAGTTTCAAGA
TATTTAAGGCTGCTTAAAACTTTTTCTTGAATTGCAAAACTGCAAAGTTT
TCTGTGCAAAATTATCCCTATTAATGTGGGTCAACGTAATTCTTAGGAGT
CATCTGGTGTCTATGCTATGCTGTTTGCTTTTTTCTTGATTCCCAGATAA
TAGCTATATTTTGATATTTCAAAGGTTTGAATTAAATGTCAGACCTTTTG
ACCTCTGCTTCGCCTGTATAGATTTGAAACATTTCCCTTTACATCAAGGT
CTGAACCCGACAGATGAGACAGAGGATGAAAGCAAAAAGACAAATGGTAC
CAAAGAAGAAGTTGTGGATGACTTTCAACGAGAATTACAATTGTATGTAC
AGTTTTCTTAAAGTCCTTCAATCTCAAATTTCAACCATTAGAAGAGTTGT
AGGAAGAGTTATTGTATGAGATCGATTGTTTGAAGTTACTACTTTGCTGG
AGTACTCTTCAAATAACTCCACCTAATTTATGCACCTCCAATGTTTTCCC
TTTTAACGAAAAAGGATCGTTTAATCTCCAAGCAGATTCCAATACTCCGC
GCATGGCACTTATTCATTCTAAAGGCCATGGCTCCGTAAGAGATTCTGCC
CAGGTTGGTGCACTGTTTTGATCTTTTTCATGCAGTTTTGGGATGAATAT
TTTTGAAAATAAATAATTGCACCATAATCAAAACCCGATCATAAACTTAA
ACATTAGAACCTGGCCGCATTCGCTTTCGTTTTTAAATCCATCTTTTTGA
TTAGACGGGAATGTGACGTTCTTTAGTGACGTATTGTGACGTTCTTTAGT
GACGTATTTGTCGCTTATTGGGTCACTACCAGTTAGGGTCAGGGTTGGAC
TCGAGAGTCGCAACTGAGTGCCCTGGACCTATTTAGAGTCACTTTAGGGT
CAATTGGAGCCACTGACAAAATTGAAAAACCTCGTTTTTGTAAGATTTTA
GATTGCTGCGAATAAGGTCCTTTCTAAGTTTTGAATGTTATGGCTGAAAA
CCAGGTCAGATCGTCACATTTGCCATATCCACTAAAATAGTCTTTAATTC
ATATTCTTTTGTCAAGAATTTGTATTCAGTATCCTCAATTTTTTTCAGTT
ATCGTCAAGCACAAGTATCAGCGAAAGAGGCTTTAAGTAAATTAAGAGAT
ATGGGTGTGCCTACAGAAAGACCGGAAGATTATTTTGCTGAAATGGTCAA
ATCTGACGCACACATGCAAAAGGTATTTTAGATTACACATTGAAAATTAT
TTACCAAGACCTATGGTTTCCATTAATTCAAATCCAAATTTTTTGAACGA
ATGCTGCAAGGTACTTTGAAGCTCTAAATAAATCATATCTCGCCATAGGC
TTTAAAAGTGTACACTCCTCAGTGACGTGATATTGGGAAGGGGCTGAGGT
TTAGTGAGGGAAATTTTGAAAATTTACGTTCAAGATGGCAATGGTCAATG
CCCTCAAAATGAAATCAGACAATTTATCTTTTCTTTTATTTATAGAAGTG
TATTTCTCAGGTCTATTGACCTCTATGAAACAATCTTACATCTTTACAAT
TTATAGATCTTATCATTCTATTCGTCTGTCAATTTTGTTAAAGAGTTTTA
CAGCTAGGCACCTGGGCCTCTAGCTCACTCTTCTTACAATCATGTTGTTT
CGTAAATTTCTTTAAATAGAGTTTAGTCCTAGGACTACCTCTCACTTTCC
ATATATGACTCTTGTCTTTTTCTTTCGATGTTTTTCTTTTGCTTTATGAT
GCCATTGTTTTATTATCTCGTGTTCTTTCCTTAAAAAATCGCCTGATACT
CTGAAATCATCTTTATCTAGTCTGTGGGCTGATGCATAAGTATTCTAATC
CTTTCTTCTTCACTCTCGAGAGTAACTTTTAATGGTCTCCATCGTACATT
TCATCTTACGAGCACCTATGCGTTCTACCTTGATTATCGTCACATCGAAA
CCCATTTGTTGTTTCAGTATTCTTTCTATAAAATCTTTGTCACTCGTTGC
TCTTCTTCGTTTTCGTTCGTTTTTCACCTAAATCATGCACCATGATGTTG
CACTTGGTTGATTTGAGCCAACGCTCCTCTTCGTTCACTGATTTAATGAA
ACTTTTTAAGGTCACCTCTTGTTTTTTGTAGATCTTCTTTGGTGACTTCT
GCAAATGATTTTTGGACCTACCCCGGTGGGCTGTAGGTCCTATAAATTAA
CCTCTGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCG
TTCGTCCGTTCGTCCGTTCGTTACTAGCTTTTCTCGGGATTGGCTCATTA
GTTTTTCCTAATTTTTGGCACAAAGATGCAAAATGGTAATGCCCAAAATG
TGACGGAGCCCGATTTTCGAAAAAAATTCATTTCCGGCCGAAAATGCCGG
AAATATGCCGGAAAAACCGGTTTTTTGGCATTTTCTCGAGATTTCATCAT
TAGTTTTTTCTGATTTTTTGCACAAAGATGCGTATTAGCAATGCCTAAAA
CATGGATTAGTCCGATTTTTGAGAAAAATTCTATTCCGGCTGAAAATGCC
GGAAATATCCCGGAAATCGCCGTTTTTGCAGATTTTCATTGGACTTATTC
CTTATATTTCGTTGTTTTTTCACACAAAAACATTATTTGTAGCAATGCCC
ACCATCAAGCATGGTTTAATTGTCAATAAAAGTGATTTTTGAAGTCGGAA
CTTTCTAAAAATCGCCGGAACAGCCTATTTTCGCCGGAAAAACGGTATTT
CTTGAATTTCTCGAGCTGTACTTTATATTTTTTCATGAAATTTTGCACAC
TGATGCAAAATGACAATACCTAAAATGTGACGGAGCCCGATTTTCGAAAA
ATAGTTTTTCCCGGCCGAAAATGCCAGAAATATGCCGGAAAACCGTTTTT
TTTTACATTTTCTCGAGTTTTCATCTTTAGCTTTTTCTGATTTTTTGCAG
AAAGATGCGTATTTGCAATGCTCAAAACATGGCCGAGTTCGATTTTTGAG
AAAAAATTTTTTCCGGTTGAAAATGCCGGAAATCGCCGTCTTTGCAGATT
TTCATTATATGTTTTCCTTGTATTTCTATGTTCTTCACACAAAAACATTA
TTGATAACAATGCTCACCATCAAGCATGATTCAATTGTCAATAAAACTGA
TTTTTGCGACCAGAACTTTCTATTAATTTTTCCCTACAACCCTTCCCTCT
CCCCCCATCAACAATCAATGATGAATTTTTTGCGTTATGCATTTTCGCTA
AACGATATATTTTCTGACTGATTTTTTTCTCCTCGCATTGCTATCTAACT
TTCATCATCAGGTAGGTCCATTCAGCATCTAGCTTGTTTTTTTTTGTTTC
TGTGTTGTAGAGCTGTGTTTCAGATCGTTTGTTGTTCCGTTCTTTGTTTA
CGTCTTTTTTATTCATAAGCTTCTCGACTTTCGTTTCTAGAGAGGTTATT
CTCTCGTTGAAACCTAATTTCAATCCATGATGTTCATCTTTATCTGCTTG
TTTTAATCCTCTCGAGAGTTATTGTAACACAATTTCCACATTCGAAGCGT
CGGCTTTTATATTGCAGACAAAGCTGAATCTGATAGGCCGGGAGCTCAGA
GCAAGCATAATGAACAAGTCTATCACATCTCCTACACATTGTTAGAATTT
TCGTTGATTTCCGCCATATTGTTGCATTTTCAAGATCATCTCAGAAACTT
TATAAAAAATGTATTTCTCAAAAGAGCACTCTATTCATCGCCGGTTCGAT
TTCTCTTTGATTCTTTTTAGATACGACAAAAAATGTTGAGTAAAAAAGAA
GCTATCGAGAAATCTGAGAAGGCCAAGAAACAAAGAACACTAAAGAAATA
TGGAAAACAGGTAGGGTACTCAAATTAGAATATTAATCTTGACATAAACT
GTATTGAAAAATTGGAATATTTTTTTATGATATATATTTCTGTTCTCTTC
TTCTTGTGTTTCTCTGCACAATTCAAAGTGCTCAATACATAAGTAGAGCT
TGATATATTTCTGTTCTCTATATATTTCCTGGTTCAACCTTTTACGTTTT
CTATTTCTGTTGTATTTTCAATTGTTTTTTTTTTGTACAGATACAACACC
AAGTGCTACAAAAAAGACAACAAGATAAAAAGAAAATGCTACAGGCTGTC
GATCACCTAAAAAAGAGTATGTAATACTTCAATCTTTTCGACCCTTATCA
AGAGATTCTCACATAACGAATTTCTTCAAGACATTTCGAAATGAATTTCT
CCGCAAAAACAATAAAACTTAAGGTTTTTCCTTTCAAGCCTTTCAAGAGG
AAGCACTCCTATCTAAATGCAAAAAAAAATTTAAAGTACATACCTGGACA
TATATCCGGATATACAATTAAAAAATAAAATAGCCGCCTTCTTATTCACC
GTTCAACACATAATCGAAACAATTTTCCTTCGAAAATACAAGGGACTTTC
ATTCAAGGGAATACAATACAGTAAAACCTCTAATTAACGGACACTCTAAA
AGGTGGACACCTCTGATTAGCGGACAATTTCATTTTCCCCGGCCAAAACC
CCTATTTTAGCTCTCCAATTAGCGAACATTGAATATCAAACGAGTCACAG
ACGTCCAAAATCGAAAAGAAATTTTTAGATATTTGTATTTCAAGCACTTA
TTAGTCCTATTATTCAAATTATTTCTACAAATTTCCAGTTTTCCCTTGAC
CCATTCAACGAATTTAGGTGGGCCAAAGTAATCATAAATCACTGGTACTT
CAAGTCCGCACCCACCACCTCGATTTAACCTCTTGCCAGTCACTAACTCG
AGCTCTGATTCCAATTCTTCTATGGCCTAGTGTCTGCAGATAAGTACTTA
ATACCCCAATTTTGTATTTTCGACACCCTGGGATGGCCTAATTTCAAAAT
TGGAGCTCCGAGATCAAAAGTTTCTAAAAAGCGGACACTTCTAATTAGCG
GACACTAACCCCTTTCCCCGATGGTGTCCGCTAATTAGAGGTTCCACTGT
ACATGAAATTTTCTTACGAAAATACAGGGAGTTTTCCTACGAAAGTACAA
GCAATTTTCCTTTAAAAATACATCGAAATTTTCCTACGTAAATACGAAGA
ATTTTCTTTCCAAAATAAAGGGATTTTTTTATAAAAACAAGCGATTTCTC
TTCAAAAATACAAAGAATTTCCCTGAAAGGATAGCCGAAGAACAAAGATA
CTTTTCAAAACAGGGAATTTTGTTTCGAAAATATACGGAGGAGAGAAACT
ATTGTTTGCTTATAATAGACCTCTACTTTTGTTTTTAGACAAAGGTAAAT
TGGAGAAATTATCCGGCAAAGATGACATGTTCGATATTAACACTGGTGAC
CGTAATCAAAACAAGTGAGTAGGTTAATCAAATATCGGATTGAATTTGGT
TCAGTCACGTCATCTATTTTAGAATTTGAAATGATTTCATTATGTTATAA
TGTTAGACTTTTAGACATCAGGGGTGCGAGAATGATAAAGAGAATTACGA
TTGAGTCACGGTATTATTTCTCGATCTTGTCATTGTTGGACTTTCTATGA
TGCAGTTTGTTTAAATTAGTTTTTAAGATTTACTTCGCTTATTTCAAAAT
GATTTGAACCTGATGTGAGAAGCAAACATGTTAAGCAATTCTTGAGAACT
GAAAAATTTTAACGATTGCGCCTAATTTATGGACCCCTTCATTCACTCTC
CCTTGTTCCTTAAAGACATTTCGAATTGATGAATGACTAAAAAGTGTTAA
CGATTTCGTATTTATGTGACCTAATCTCTCTATCCCTTCCTTCTTTCAGA
CAATCTGGAGGTTTAAAACGAAAACGTAAAGACGATAAGTTTGGTTTTGG
TGGTCAAAAGAAAAAATTCAAGAAGAATTCCGCCCAAAGCTCCGCCAACG
CCATGTCTGATTTCAAACGCAATGTTCACGGCAAGAAA Coding sequence (CDS) from alignment at sc0000329_pilon:152616..159503- >XLOC_031936 ID=XLOC_031936|Name=XLOC_031936|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1656bp|location=Sequence derived from alignment at sc0000329_pilon:152616..159503- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGAAAAGAAGACAAAGCAGTTCTCTCACACAGCGAAGATGAAGAATC
AGACAGCGAAAATGAGATGGGAAAAGAAGACAAAGCAGTTCTCTCACACA
GCGAAGATGAAGAATCAGACAGCGAAAATGAGTTCTTGGAGGAGAATGAA
CGTATTTTGGGTGAGGATGAACCAACCGAGAAGAGAGAATTGATCAACAA
CCAATTCTTGGAGGAGAATGAACGTATTTTGGGTGAGGATGAACCAACCG
AGAAGAGAGAATTGATCAACAACCAAGAATTGATGAAAGTAAGACTTGAA
GAATTGAAGAAAGAAATTGATTGGATTGAACGTATGGATGTGACGGTTGA
CCTCTCTGATTTGCCAGGAATTGATGAAAGTAAGACTTGAAGAATTGAAG
AAAGAAATTGATTGGATTGAACGTATGGATGTGACGGTTGACCTCTCTGA
TTTGCCAGGTCTGAACCCGACAGATGAGACAGAGGATGAAAGCAAAAAGA
CAAATGGTACCAAAGAAGAAGTTGTGGATGACTTTCAACGAGAATTACAA
TTGTCTGAACCCGACAGATGAGACAGAGGATGAAAGCAAAAAGACAAATG
GTACCAAAGAAGAAGTTGTGGATGACTTTCAACGAGAATTACAATTTTAT
CGTCAAGCACAAGTATCAGCGAAAGAGGCTTTAAGTAAATTAAGAGATAT
GGGTGTGCCTACAGAAAGACCGGAAGATTATTTTGCTGAAATGGTCAAAT
CTGACGCACACATGCAAAAGTTATCGTCAAGCACAAGTATCAGCGAAAGA
GGCTTTAAGTAAATTAAGAGATATGGGTGTGCCTACAGAAAGACCGGAAG
ATTATTTTGCTGAAATGGTCAAATCTGACGCACACATGCAAAAGATACGA
CAAAAAATGTTGAGTAAAAAAGAAGCTATCGAGAAATCTGAGAAGGCCAA
GAAACAAAGAACACTAAAGAAATATGGAAAACAGATACGACAAAAAATGT
TGAGTAAAAAAGAAGCTATCGAGAAATCTGAGAAGGCCAAGAAACAAAGA
ACACTAAAGAAATATGGAAAACAGATACAACACCAAGTGCTACAAAAAAG
ACAACAAGATAAAAAGAAAATGCTACAGGCTGTCGATCACCTAAAAAAGA
ATACAACACCAAGTGCTACAAAAAAGACAACAAGATAAAAAGAAAATGCT
ACAGGCTGTCGATCACCTAAAAAAGAACAAAGGTAAATTGGAGAAATTAT
CCGGCAAAGATGACATGTTCGATATTAACACTGGTGACCGTAATCAAAAC
AAACAAAGGTAAATTGGAGAAATTATCCGGCAAAGATGACATGTTCGATA
TTAACACTGGTGACCGTAATCAAAACAAACAATCTGGAGGTTTAAAACGA
AAACGTAAAGACGATAAGTTTGGTTTTGGTGGTCAAAAGAAAAAATTCAA
GAAGAATTCCGCCCAAAGCTCCGCCAACGCCATGTCTGATTTCAAACGCA
ATGTTCACGGCAAGAAAACAATCTGGAGGTTTAAAACGAAAACGTAAAGA
CGATAAGTTTGGTTTTGGTGGTCAAAAGAAAAAATTCAAGAAGAATTCCG
CCCAAAGCTCCGCCAACGCCATGTCTGATTTCAAACGCAATGTTCACGGC
AAGAAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000329_pilon | genome | sc0000329_pilon:152616..159503 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 691-828:139 |
| Aaloc | 616-687:649 |
| Aaloc | 538-612:1849 |
| Aaloc | 448-537:2169 |
| Aaloc | 325-447:4840 |
| Aaloc | 232-321:5689 |
| Aaloc | 139-228:6081 |
| Aaloc | 67-138:6471 |
| Aaloc | 1-66:6889 |
|
