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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000329_pilon:103607..107491- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_031934 ID=XLOC_031934|Name=XLOC_031934|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3885bp|location=Sequence derived from alignment at sc0000329_pilon:103607..107491- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGAAATACATCTTCAACTACTCCAACTGAGGAGATTGCAGCAAAACC
AAAACCAGAAGATCAGCGTGAATATCCACGTACCGGTCCCTCTGCACCTA
CAGAATGCCCAATGCATACCTCAAACCCTGATAAAACAGCACCAAGTACT
GTTACAGCGAAACAAGTGATTCCATCAGAATGTCCGATGCATGCATCAAA
TGTTGACAAACCGAAAGTTGAATCGAAACCAATTCCAAGTGACTGTCCAA
TGCATGCTTCAAATGTGGATAATAATAAAGAAAATGAATTGGACCCGACA
AACATGGTACCATTTATTAAATTACAACACTGACCTTTATATATCCCTGG
AGCTACATCCGCCATCTTTGATCGAAGTGTTTTTTTACAAGTGGCACCCA
CAAAGAGGCCATTTCAGTGTTAAAAATTAACGTCAAATGGCGCTACATCT
ACAAAAGTATTGAACGAAAAGTAGATCTAGCGCTCTAGATGCATTTACAC
TGCTATTGAATAACACTACCATTAGGGTACCACTTTCAAAAAACACCGAC
CAAAGATTTTGCTTGGTAGGGATTGAGAAACTTGGTCCAGGGTATATAAA
AGTCAGTGGTTTACACCTTGCATTAAAATCTAGATAGATTTTTCAAATGT
GAACAAGACCTGATGATGAAGTAGCCTGCCTGTTAGTATTTTAAACATAA
ATGAGTTCGCAGTTCAATCTACCGTGTCTTCATAGAATTTGTTTTTGTTA
GCTTATAAGATTACAAACTACACCCAAGCAAAAGCTCTTTCAAATTTAAG
GTCACTGAACTAACTTTCTAGACCTCTTGTTAGAACTTTTTCAAACAAAC
TTTTTGCTCAATCTTACTTGAGCAAGTTAACTTGTACGAATAAGTTTGAA
TATGTCGAGTTGGCTTTAGACGGCTTTAAAGCTTTTTCATGTTCAGTTGT
TTTATGTAACATTGACACCATTACGAAAGCAAATATTTGGTTTCTGTAAC
GAAGTATCTCTTCCACAGATTGGAACATTTGCTTCCATAATGGTAGAAAT
AATCAAAAGTAAGAAATCTTATTTTGTCTAGATTCTCATTGATAGAGAAG
AGTCCTTGCTTTTGAAACTTGAATCATCAATCTTATGTTGTGTTTATTTA
GATGCCACCAGCAAATCAAAGACCATCACCAGGACAACCTTTCTTATTGA
ACATCAATCGACAAACTTCAACCATCCCTCGTGGCGGTGAGGATCACGTT
GGCAAGAATTGGCAGTATCCTTCAGAACAAATGTTCTGGAATGCTATGCT
GCGGAAAGGTTAGTTTTAATATGAATAACAGTCATGCAATTTGTCTCAAT
TGATTAAAACATGATATCACACTGTCGTTCACATGACAAAAGGTTTAATC
TCAAGCCTTGAAAAGCCCTGACTGTTTGAGATTGAACCTTTTGTTATGTT
AACGACGATATGATATCATGTTTGAATGAATTGGTCAAAATAGGTATCAC
TGTGAATTGAAAATTTTTGTTATACCCTGTTTGTGGGATTGGTTTTCTCG
TAGTATGTTGACTATTTAACAAAATAGTGACGCTTAATAAGAACATACTT
TGAACTTTTGTCAGATTCACCTTTTACAACCCATACCCTCTTTAATATAG
CCTTGTGAATATAGAGACGTTTCAGTAGAACACACTCAAATTCACACTTT
TATTGTTACATAAGTGTTCCCGCTCCATATCATGTATCAGGACAGTGTCT
GCCTATTGTTATATTATGCTGATATAAGCAAAAAAATGTTTTTCTTTTCC
TCTTTCTGACCAATCTTGCTCCACATCTGTGCCAATTCAGCTTGTAAATT
TAAATTGATGAGTTAGCAAACGATATCACTCTTATTTAAAAACAAAACCT
TTAATATGTAGCATTGTGAGTATAGAGACGTTTTAGAAGAACACACTCAA
ATTCACACTTGCCCTTATTAATATGTAGCTATATGAATAATCTTTACCGA
GTTTATGTATCGGAGGATATCGAGGGCGACGGTAAGTGAAATGATACAAA
ACAAAGTCGATAGTTGATGTACGGCTCTATATCGCCTTTGCTCACCTAAA
CAGACGACGGTATTTTGGTGTTTTTACCGTCGTCGAGCAAATTGGACGGT
GATTTTGGATTTGCTTTATACCGTCCCCCTCGATTTATCTCGAATACATA
AAATCGCCTTTGTTACAGGTTGGCGATGGGATAAAGACGCTTTATCACAA
CAAGACATGTCACACATCATTCGTATTCATAACACAAACAATGAACGTGC
GTGGGATGAAATTATGATGTGGGAAGCTTTCCATCCGTATGTTGATTTCA
CTTCTTCGTGTTTTCATATTGGACACTTTTTTTATAAGAAAATACAAAAT
TTTTGAAGCCTTCGGATGTTCTTAACTTTTTAAGTTTCGAGCCTAAAAAT
GCTCTTATAACATATTCTTATTTCCACCATTTTTGTCTATTTTCCTAAGA
AATTGGGTGTTTTAGAGTCCGCAAAGCCTTAAAATGTTTTTAACTTGTTC
TTAATATTTTGGCCATCGAAGCCTTGTGAAAAACGTGTACAATTGATTGA
TTTCGCTTCTTCGTGTTTTCATATTGTATAAGTATACATATTATATTCTC
TACTACCATCATAATATAATTATTAAATTTGAAGAACAGGGTGAAGAAAA
TTTAGTGATCTCGTCATGTAAAGCTATGGATTTGAAACAATTAACTTGTC
ATTTGTGTCATCACAAGCAACTTTAAATACAAATACGAACGTTCTAGTAA
ATTTTATTTACTAGTTTAAGAATTTCTTAAGACGTTTCAGGAACGTTGTA
GAACCTTCATGAACGTTTCCAAACGTTTTCATTACGAACGTTCAGGAACG
TCTCAAGATCGTTTGTACTTTAAATCGCTGGTGATGACTGCTTTAATAAT
TTATTTTATTTTTTCAGCGAATGTGAGCAACCCAAACTATTGAAGTTTGG
TGGGCGAGCCAAAGATTATTCACCCAGAGCAAGATTCAGAGCTTTGATGG
GGTAAGTTTCTTTTGTTGTTAGTTTTAAACCAAAACACCGGCCTGCTGCT
TTAAGACATGTGTCTCAACCTTCAACAACTAGAAACAAATCAACATGTGG
GATTATGGATTAGTCGGCTCAAAAGCCAGACACAATATTGTTCGTATAGT
TAGCTCAATCCAGTCAAGTAGATAGATACCGTAAGTTGGTCTAATGTCGA
CACCCCTTTTCTAATTCCGGCACCCTTCTTTCCTTCTTTAGAGATAGGAA
TAATGGGAAGGTCGGAATCACTGATTGAAACTAATTTTCTTTGTTTAGCG
ATCAGAGAGGAATAAATCTTTTGTCTATCAGTGATTAAGACTTTCCTATT
ATTCCTATCTCTAAAGAAGGATGTCAAAATTAGAAGAGGGATGTCGACAT
TAGACTAACCTACATTAGAAGCTAACACATTAATATTACCGGCTACAATA
TCTCTGAAATCTAATAATGGAAATTTCACGAAAGATTCGATCTTTTTGTT
TTTAAATTGAATCATTTGAACATTTTTAAAATGTCTTCCATTTCGAAACT
TTTTTCATTAGCAATGATTTACCATTTGATCGGCACGATTGGATTATTGA
CCGCAATGGGAAACCCGTCAGATACATTATAGATTATTACGATATCGGTG
ACGAGAATGGTTACAAAACTGGAGAATTCGTTGAACTCGATGTCCGACCA
GCTTTTGACTCTTTCGGTGCAGCTTTTGACCGTTCTCGTGTTGCTATGTT
ACGGAAAGCAGCTGGTGTTTACCAATGGTGGAAAGGTGCGCCAGAAGAAC
AAGCTTTACCACCAGCAAGTAGTGAAACCTCATGA Coding sequence (CDS) from alignment at sc0000329_pilon:103607..107491- >XLOC_031934 ID=XLOC_031934|Name=XLOC_031934|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1878bp|location=Sequence derived from alignment at sc0000329_pilon:103607..107491- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGAAATACATCTTCAACTACTCCAACTGAGGAGATTGCAGCAAAACC
AAAACCAGAAGATCAGCGTGAATATCCACGTACCGGTCCCTCTGCACCTA
CAGAATGCCCAATGCATACCTCAAACCCTGATAAAACAGCACCAAGTACT
GTTACAGCGAAACAAGTGATTCCATCAGAATGTCCGATGCATGCATCAAA
TGTTGACAAACCGAAAGTTGAATCGAAACCAATTCCAAGTGACTGTCCAA
TGCATGCTTCAAATGTGGATAATAATAAAGAAAATGAATTGGACCCGACA
AACATGATGGGAAATACATCTTCAACTACTCCAACTGAGGAGATTGCAGC
AAAACCAAAACCAGAAGATCAGCGTGAATATCCACGTACCGGTCCCTCTG
CACCTACAGAATGCCCAATGCATACCTCAAACCCTGATAAAACAGCACCA
AGTACTGTTACAGCGAAACAAGTGATTCCATCAGAATGTCCGATGCATGC
ATCAAATGTTGACAAACCGAAAGTTGAATCGAAACCAATTCCAAGTGACT
GTCCAATGCATGCTTCAAATGTGGATAATAATAAAGAAAATGAATTGGAC
CCGACAAACATGATGCCACCAGCAAATCAAAGACCATCACCAGGACAACC
TTTCTTATTGAACATCAATCGACAAACTTCAACCATCCCTCGTGGCGGTG
AGGATCACGTTGGCAAGAATTGGCAGTATCCTTCAGAACAAATGTTCTGG
AATGCTATGCTGCGGAAAGATGCCACCAGCAAATCAAAGACCATCACCAG
GACAACCTTTCTTATTGAACATCAATCGACAAACTTCAACCATCCCTCGT
GGCGGTGAGGATCACGTTGGCAAGAATTGGCAGTATCCTTCAGAACAAAT
GTTCTGGAATGCTATGCTGCGGAAAGGTTGGCGATGGGATAAAGACGCTT
TATCACAACAAGACATGTCACACATCATTCGTATTCATAACACAAACAAT
GAACGTGCGTGGGATGAAATTATGATGTGGGAAGCTTTCCATCCGTTGGC
GATGGGATAAAGACGCTTTATCACAACAAGACATGTCACACATCATTCGT
ATTCATAACACAAACAATGAACGTGCGTGGGATGAAATTATGATGTGGGA
AGCTTTCCATCCCGAATGTGAGCAACCCAAACTATTGAAGTTTGGTGGGC
GAGCCAAAGATTATTCACCCAGAGCAAGATTCAGAGCTTTGATGGGCGAA
TGTGAGCAACCCAAACTATTGAAGTTTGGTGGGCGAGCCAAAGATTATTC
ACCCAGAGCAAGATTCAGAGCTTTGATGGGCAATGATTTACCATTTGATC
GGCACGATTGGATTATTGACCGCAATGGGAAACCCGTCAGATACATTATA
GATTATTACGATATCGGTGACGAGAATGGTTACAAAACTGGAGAATTCGT
TGAACTCGATGTCCGACCAGCTTTTGACTCTTTCGGTGCAGCTTTTGACC
GTTCTCGTGTTGCTATGTTACGGAAAGCAGCTGGTGTTTACCAATGGTGG
AAAGGTGCGCCAGAAGAACAAGCTTTACCACCAGCAAGTAGTGAAACCTC
ATGACAATGATTTACCATTTGATCGGCACGATTGGATTATTGACCGCAAT
GGGAAACCCGTCAGATACATTATAGATTATTACGATATCGGTGACGAGAA
TGGTTACAAAACTGGAGAATTCGTTGAACTCGATGTCCGACCAGCTTTTG
ACTCTTTCGGTGCAGCTTTTGACCGTTCTCGTGTTGCTATGTTACGGAAA
GCAGCTGGTGTTTACCAATGGTGGAAAGGTGCGCCAGAAGAACAAGCTTT
ACCACCAGCAAGTAGTGAAACCTCATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000329_pilon | genome | sc0000329_pilon:103607..107491 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 667-939:274 |
| Aaloc | 583-663:918 |
| Aaloc | 466-579:1666 |
| Aaloc | 307-462:2735 |
| Aaloc | 1-306:3886 |
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