XLOC_031926 (mRNA) -

Overview
NameXLOC_031926
Unique NameXLOC_031926
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000329_pilon:215990..218346-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031926 ID=XLOC_031926|Name=XLOC_031926|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2357bp|location=Sequence derived from alignment at sc0000329_pilon:215990..218346- (Clytia hemisphaerica_ch_hm2_pilon)
TTCCATTACAAAGCTGATGGGTTCCAGTTTCAAGAATTTCGTTGCAAAAC TGATGAGTTCCAGTTTAAAGAATTCCATTGCAAAGCTGATGGGTTCCAGT TTCAAGAATTTGAAATGTTGGCTTGCACACAAACAAACAATATGACAATT ATTGTAGACATCATTGACAAAAACTCCTCAAATGAATAATCACAAAAAGG AATTCCGGGAAAACAGTGCCAAATGAAAGTATGTCATTCTGAAGGATAAA GAACTAAAGCACAAACGATCTCTACCACGTGAACATGGATAGATCAGGAT GGGTGTATTCAAATTCCATGCTTCATATTGATACTATTCCATTGCAAAGC TGATGGGTTCCAGTTTCAAGAATTCCATTGCAAAGCTGATGGGTTCCAGT TTCAAGAATTCCATTGCAAAACTGATGGGTTCCTGTTTCAAGAATTCCAT TGCAAAACTGATGGGTTCCAGTTTAAAGAATTCGAAATGTTGGCTTGCAC ACAAACAAACAATATGACAATTATTGTAGACATCATTGACAAAAACTCCT CAAATGAAAAATCACAAAAAGGAATTCCGGGAAAACAGTGCCAAATAAAA GTATACCATTCTGAAGGATAAAGAACTAAAGCACAAACAACCTCTACCAC GTGAACATGGATAGATCAGGAAAGATATATTCGGATTCCATGCTTCATAT TGATACTATTCCATTGCAAAACTGATGGGTTCCAGTTTCAAGAATTTGAA ATGTTGGCTTGCACACAAACAAACAATATGACATTATTGTAGACATCATT GACAAAACTCCTCAAATGAATAATCACAAAAAGAATTCCGGGAAAACAGT GCCAAATAAAAGTATACCATTCTGAAGGATAAAGAACTAAAGCACAAAAC AACCTCTACCACGTGAACATGGATAGATCAGGAAAGATATATTCGGATTC CATGCTTCATATTGATACTATTCCATTGCAAAACTGATGGGTTCCAGTTT CAAGAATTTGAAATGTTGGCTTGCACACAAACAAACAATATGACAATTAT TGTAGACATCATTGACAAAAACTCCTCAAATGAATAATCACAAAAAGGAA TTCCGGGAAAACAGTGCCAAATGAAAGTATGTCATTCTGAAGGATAAAGA ACTAAAGCACAAACGATCTCTACCACGTGAACATGGATAGATCAGGATGG GTGTATTCAAATTCCATGCTTCATATTGATACTATTCCATGCAAAGCTGA TGGGTTCCAGTTTCAAGAATTCCATTGCAAAGCTGATGGGTTCCAGTTTC AAGAATTCCATTGCAAAACTGATGGGTTCCTGTTTCAAGAATTCCATTGC AAAGCTGATGGGTTCCAGTTTAAAGAATTCGAAATGTTGGCTTGCACACA AACAAACAATATGACAATTATTGTAGACATCATTGACAAAAACTCCTCAA ATGAAAAATCACAAAAAGGAATTCCGGGAAAACAGTGCCAAATAAAAGTA TACCATTCTGAAGGATAAAGAACTAAAGCACAAACAACCTCTACCACGTG AACATGGATAGATCAGGAAAGATATATTCGGATTCCATGCTTCATATTGA TACTATTCCATTGCAAAGCTGATGGGTTCCAGTTTCAAGAATTTGAAATG TTGGCTTGCACACAAACAAACAATGTGATAATTATTGTAGACATCATTGA CAAAAACTCCTCAAATGAATAATCACAAAAAGGAATTCCGGGAAAACAGT GCCAAATGAAAGTATGTCATTCTGAAGGATAAAGAACTAAAGCACAAACG ATCTCTACCACGTGAACATGGATAGATCAGGATGGGTGTATTCAAATTCC ATGCTTCATATTGATACTATTCCATTGCAAAGCTGATGGGTTCCAGTTTC AAGAATTCCATTGCAAAGCTGATGGGTTCCAGTTTCAAGAATTCCATTGC AAAACTGATGGGTTCCTGTTTCAAGAATTCCATTGCAAAACTGATGGGTT CCAGTTTAAAGAATTCGAAATGTTGGCTTGCACACAAACAAACAATATGA CAATTATTGTAGACATCATTGACAAAAACTCCTCAAATGAAAAATCACAA AAGGAATTCCGGGAAAACAGTGCCAAATAAAAGTATACCATTCTGAAGGA TAAAGAACTAAAGCACAAACAACCTCTACCACGTGAACATGGATAGATCA GGAAAGATATATTCGGATTCCATGCTTCATATTGATACTATTCCATTGCA AAACTGATGGGTTCCAGTTTCAAGAATTTGAAATGTTGGCTTGCACACAA ACAAACAATATGACAATTATTGTAGACATCATTGACAAAAACTCCTCAAA TGAATAA

Coding sequence (CDS) from alignment at sc0000329_pilon:215990..218346-

>XLOC_031926 ID=XLOC_031926|Name=XLOC_031926|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1314bp|location=Sequence derived from alignment at sc0000329_pilon:215990..218346- (Clytia hemisphaerica_ch_hm2_pilon)
TTCCATTACAAAGCTGATGGGTTCCAGTTTCAAGAATTTCGTTGCAAAAC
TGATGAGTTCCAGTTTAAAGAATTCCATTGCAAAGCTGATGGGTTCCAGT
TTCAAGAATTTCCATTACAAAGCTGATGGGTTCCAGTTTCAAGAATTTCG
TTGCAAAACTGATGAGTTCCAGTTTAAAGAATTCCATTGCAAAGCTGATG
GGTTCCAGTTTCAAGAATTCCATTGCAAAGCTGATGGGTTCCAGTTTCAA
GAATTCCATTGCAAAGCTGATGGGTTCCAGTTTCAAGAATTCCATTGCAA
AACTGATGGGTTCCTGTTTCAAGAATTCCATTGCAAAACTGATGGGTTCC
AGTTTAAAGAATTCGAAATTCCATTGCAAAGCTGATGGGTTCCAGTTTCA
AGAATTCCATTGCAAAGCTGATGGGTTCCAGTTTCAAGAATTCCATTGCA
AAACTGATGGGTTCCTGTTTCAAGAATTCCATTGCAAAACTGATGGGTTC
CAGTTTAAAGAATTCGAAATCAAAGCTGATGGGTTCCAGTTTCAAGAATT
CCATTGCAAAGCTGATGGGTTCCAGTTTCAAGAATTCCATTGCAAAACTG
ATGGGTTCCTGTTTCAAGAATTCCATTGCAAAGCTGATGGGTTCCAGTTT
AAAGAATTCGAACAAAGCTGATGGGTTCCAGTTTCAAGAATTCCATTGCA
AAGCTGATGGGTTCCAGTTTCAAGAATTCCATTGCAAAACTGATGGGTTC
CTGTTTCAAGAATTCCATTGCAAAGCTGATGGGTTCCAGTTTAAAGAATT
CGAATGCAAAGCTGATGGGTTCCAGTTTCAAGAATTCCATTGCAAAGCTG
ATGGGTTCCAGTTTCAAGAATTCCATTGCAAAACTGATGGGTTCCTGTTT
CAAGAATTCCATTGCAAAACTGATGGGTTCCAGTTTAAAGAATTCGAATG
CAAAGCTGATGGGTTCCAGTTTCAAGAATTCCATTGCAAAGCTGATGGGT
TCCAGTTTCAAGAATTCCATTGCAAAACTGATGGGTTCCTGTTTCAAGAA
TTCCATTGCAAAACTGATGGGTTCCAGTTTAAAGAATTCGAATGCAAAAC
TGATGGGTTCCAGTTTCAAGAATTTGAAATGTTGGCTTGCACACAAACAA
ACAATATGACAATTATTGTAGACATCATTGACAAAAACTCCTCAAATGAA
TAATGCAAAACTGATGGGTTCCAGTTTCAAGAATTTGAAATGTTGGCTTG
CACACAAACAAACAATATGACAATTATTGTAGACATCATTGACAAAAACT
CCTCAAATGAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_031926XLOC_031926-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000329_pilongenomesc0000329_pilon:215990..218346 -
Properties
Property NameValue
Aaloc547-657:112
Aaloc403-546:483
Aaloc262-402:1116
Aaloc112-258:2019
Aaloc1-108:2358