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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000253_pilon:381509..386554+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_031829 ID=XLOC_031829|Name=XLOC_031829|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5046bp|location=Sequence derived from alignment at sc0000253_pilon:381509..386554+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTTCCGAACATGAAACGGAACTTATACCAGgccaatcaaaaacaaa
acaagacgGAGAGTCCAACGAAGTACGGACGTTGATCAAGAACCCAATAC
CAGCGATCAAACATCAGAAGAtttttcacatcgttttgggtgttgcattg
tttttcttcattttgggacttgtgtttttAATATTTGGTGTGTATTCGTA
TAAAAAATCGCTGTGTCAAGAAGATGGTAGATCGATCTCGTTGAATAAAG
ACCAAAagaaatttcgatctttcctcAAAGACACTTTTAATCTTTATCAT
GAGAATTATCCAAATGAAGCATACACCGACCCGTCATTGCAGCCCCGCca
atatttcgaaaaatttgtccCGTATGATCCGTCCTGGAAGTCATTAAAGT
CACGAACAGACCACGCAATTAGATTACAAAAAGAACTTAAAGACCTAGAT
ATCAATTTATCCAACTTGCGGCCGCGCGAAAAGAAAGCGTACGCGCAGCT
GGAGCATTTCTTGGAATCCATATTTGGGAACCCTTACGATGAGAACTATT
ACACAGGGGACTGGATGCTAGGCACCAATTATGGATGTTGGCAGCGTTTC
TGTGAACTTTTTCAACCACtggataaaatatttcaacataAGAAATTTGT
TCCGGAAACATATAATGATTTAAACAAAATTGTTTCCAAATTGAAACTGT
TTAAAAACTCTATTGAAAATTACAAACATAATATTGTGTTGGGTGTTCGT
ACTGGGATGGTACGACCGTCTGAAGTCTGCCAAAATGGTTACGATATTTT
TGTTAGCCTTTCCCCAAAAGTGAAGCATCTTGGAGCTAAAGGTAGGTTTC
TATTTGCACTGGATGTTGCGAATTCCATTTGAGATGAGATgcttcagtca
ttttctatCTTCCTGTATCATATTGACATACCTTAGCTACGAATTATTAT
TTTCTGAGCAGAAATGTTTCGAGTAATGCACTAGGTTgctaaccctttaa
ctgccgatgtcggcatatgccgacatgagcattttcgatttctttgccga
tgtcgggatttgccgacatgggcactttccatttctttgccgatgtcggG
ACTTGTATtagattttgtattagatggtttgaaatgaaaaaagataatag
ttaaaagcttttctatgttgaaaaataactattcaagaatgttcaactca
aaattatagtccttggctgatacttcatatattattcagaaaattaagtc
aaaatcgctaccttttgcccatgtcggcatatgccgacatctggcaaata
ggtcgaaccttctttttttcccgtggcaaataggtcaaACCTTAAATACG
AACGGCAGTTTAAAGGGCTAAAAAGCTAGTCCATGGTAGAGAATTTTGCT
GTTATAAGTAATATCATTGGTTCGTTATATCCTTATCAGGACATGAAAAA
TCAACAATAATGTATTTAACTCGAATCTTTACTCGAGGATAAAGAATTTA
AGAGAATGATTTTAAGATTTCGGATGTAAGGTTTCTGGAaggaaattctt
tgaaaattggtTTAATCTTCAACTTTacctaattagtttttacactGTTT
CATTCTCAGGTGTATTGAAGGAGCGTTATACAAAGACTCTCTTGGATTCC
AAATACTACGACAAGATCAGCGTGAAGGATGTGGAGGCTTTCAAAACACA
ACATAAAGTCAAAAACATCACCGAAAAAATGTCGGATGTTTTGCTCGATT
ATTTAGGAAAACCTTTACATGAGTTCATCGAGTTTTTGAAAACTAATCAC
AGCCGACATTGTGTCCCATCGAGTGTCTCAAGTGGTCTCGCTAACCTTCC
TTTGAAACGTGTGTGGCTTGACCAAAAAGAAACTGACATCGAGACAACAC
AGAAACTACCGACCGGCGAGATATTGAAGGGCGCTAAATCATATGAAATG
ATATTACCGTATTTTACGACAACGTCAAAATATGACGTCAGTTCGATCAA
TTCCCTTGgtgaaacagaaaaacaaaagctTTACAAAAGAATCAAAGATA
TTGCTGTCCAAATCATTAAAAAGCCTGAAGCTGAATCAATCCGAGAATTA
AAAATCGATTTAGAGCACCCCcgtcattttttcaataccACACCTATTCC
TGAGGAAGAAAACGGACAAACCGGGGGTTCACGTTGTCATGATATGAAAA
CAGCGAGAAAATATTGTCCAGTTCGTTACGAAGCAATGCAAGCTTGGTTT
GAGTACGTTCAAATGACGATGGCTCGTTTACACCCGATGCTGGTCAATAT
GTTTTACCAAGCCGGTGATAAAGTGACCACTCCAAACTGTGCTATTGGTT
TGCGAGCTAACTTCAACCCAGGGTTGACCTCGCATTTTTACACGCAGAGT
GACTCGAAATGCAGCACgcaagcgtattataatattccgtttttcacaaa
aaaaccgGGACCGAAATACGGAATTTATTCGGTGGTTGGACATGAGACAA
GGCCTGGACACCATACTCAGGTAAAACATAATTATCTGATAAACTTCATC
AAATTGGTTTTTACAAAGTGTGTTCCAAAGAGGAATCAAAATAAAAGTTG
GTTCGTGAATACAATGGctgtcaagaaaaagaaaaagaatattaaatgaa
ttttcaaaactaaTTGAAGGCATTCTGTACAACCCTTGCCACTAACAATT
TGCGTACAAGCGAGGGTTGGGTTAACGTGTCCAGTCACTTTAAATGTGCA
CTCTTTTATGCTACCATGTGGGAACTGTATCGCTTTACCTAGACAAAGTC
CTTAAGGTTGGTTTCCATGCGGTAGCTTACAAAAAGTGCACACTTAGAGA
GATAATAGACTTTAGGTCCGATCGCGTAAAAATGTCTAGATTCATTTTGA
TACTGCGGactctctttaactcgaatgtctccttaactcgaacaagtttt
ctggtcctttcagttaaaaatgctttataaacctcattttcatttttcga
atTATCCTTATCAAATTTGTGCTCTTTTGCGTGTTCGAGTTGTAAAGGCT
CCACTGTAGCACCAaaccaaaaaaattgttttcatcgAGTCAAAATGATC
CTTATAAGTCTTAATACAACCTCATCGATAAGCTTGccctttcttttaaa
acttcattcaaattttttgtagaGTCAAGGCTTCAACGAACATTTCTCAT
CCAGTggaaataatgacgtcatcgattggTTGAACACGATCACTTATTAT
TCAGCGTTCACCGAGGGTTGGGCTTTGTACGCTGAGAATCCTTTGTTAGC
GGTCGAAACAGATCTTTATAAAAATGAGCCGTTGCAAGAATATGGTATGA
TAAAATGGCAGATATGGCGCGCCTTAAGATTGGTCGTTGACACTGGATTG
CATTTTAGAGGTATTAATTCTATTCTTTTCTATCAACTAAAACTAGCGGT
TCCAGATGTCGTCACAGGCGACTTTTCTcacaatccaaaatatttgtaat
AGGCTAAAGGAAGGGGGATTTGAATTCCTATTCAATTTCTAAATGAAATA
TTTAGTACTTGAACCGTGGATAATTtaaatgatgaaatttcaatAGAATC
TAAATGATAGTAAAATTTTATTCGAGCAGAAGATTAACCACAGCAAAtta
ttttcctctaattttCTATCCGATCAAAAATTGAACTAGCACTCTGGTAC
GCTATGATCGATTAGGAGTCATTGAGCCAATGCTGGTGGAATGAGTGAGC
TTAATTCTGTGAAGAGtttttttAACCAAGCAATAGTTGAATGATTTATA
TTTgtgaaataaaattaaaattaaataaagtaaattcataaattataata
aataaattacaatatagttaaaatCGCTCGCGAAATCAAAACGCTACAGA
GAAAGGCTTCAAACACGTACGGTTATTATCATATAGATGGGGAAAACTAC
GGCTTTTAGAGGATTCTGCAATTTATCAAATTGACCCCTAATTAGAGATT
CTTTTTTATCATCCTCTAGATTTAATTTAACTGATAAAAACACTTACCGG
TAACAAGATAAAGTATCTATCTCACGAACAAGAACAACttaaagaacttt
ttgattttgaattgtGAATGGAAACTAACgagttacatgttttttctata
agcataacgtttataagcatatgtggGCTCAGTTTTTgttacctaaacaa
tggctctattgtttaagaacaatagaatgctaagcagacacttgcttatc
aaaaaacttgtttttataaaatgagTGAAGGGATTGGGTACAAGAAATCG
TATTTatggatgaattttttttcaacaggaATGAAATTAAACGAAGCACT
GAAACTGTTTGCAGAATTTGCATGGGACGAAACGGACCAATCATACACCG
ATGTTGTCCGGTACATGGGGTTACCGGGCCAAGCTACTTCTTATACCATC
GGACAACTAGCAATcattcaaatgagaaaagaggTGGAAGACGCCCTTGG
AGATGAATTCAATGAAAAGGAATTTCATTACATCATACTTTCGCAGGTag
atttttgtagtttttttttagattgaaaTCCGATGTTACGTGGGCAAAAT
GGGTTTGCTGCTTGCTACTGAATTGTGGCGCTCAAAAAGTGTTTAAAGAG
AGtttttttGCGTTCAGAACCTTTTAATTATCAGTCCTATATAGGTCCAA
GAGGAACTGTAGTTAATTTCAAgttaaagtaaaaatctttgaaCTCTTGA
GCTGCTCTTAGATATGTACAGGTTCGATATATAAATTTCAGGCCTTAAGA
ATATTTCATCAATTCAGCTTGCATTCTGTATCTTAGGGTTCGGCTCCATT
GCAATATCTACAAGACTACACCAAAGATTTCATACGGTGCAAACTTAAAC
CCGATTCGTCACCCGATTGCCCAAGTATACTAGATCCGAAGAGAGCAAAT
CATCCGAAAATGAAATCCGAAAAAATCGGGACAGATGAACGTTGGGAGCA
AGTGCGAAGCGTTCTTCATGGACGACACAACAAACATTATCATTGA Coding sequence (CDS) from alignment at sc0000253_pilon:381509..386554+ >XLOC_031829 ID=XLOC_031829|Name=XLOC_031829|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4836bp|location=Sequence derived from alignment at sc0000253_pilon:381509..386554+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTTCCGAACATGAAACGGAACTTATACCAGgccaatcaaaaacaaa
acaagacgGAGAGTCCAACGAAGTACGGACGTTGATCAAGAACCCAATAC
CAGCGATCAAACATCAGAAGAtttttcacatcgttttgggtgttgcattg
tttttcttcattttgggacttgtgtttttAATATTTGGTGTGTATTCGTA
TAAAAAATCGCTGTGTCAAGAAGATGGTAGATCGATCTCGTTGAATAAAG
ACCAAAagaaatttcgatctttcctcAAAGACACTTTTAATCTTTATCAT
GAGAATTATCCAAATGAAGCATACACCGACCCGTCATTGCAGCCCCGCca
atatttcgaaaaatttgtccCGTATGATCCGTCCTGGAAGTCATTAAAGT
CACGAACAGACCACGCAATTAGATTACAAAAAGAACTTAAAGACCTAGAT
ATCAATTTATCCAACTTGCGGCCGCGCGAAAAGAAAGCGTACGCGCAGCT
GGAGCATTTCTTGGAATCCATATTTGGGAACCCTTACGATGAGAACTATT
ACACAGGGGACTGGATGCTAGGCACCAATTATGGATGTTGGCAGCGTTTC
TGTGAACTTTTTCAACCACtggataaaatatttcaacataAGAAATTTGT
TCCGGAAACATATAATGATTTAAACAAAATTGTTTCCAAATTGAAACTGT
TTAAAAACTCTATTGAAAATTACAAACATAATATTGTGTTGGGTGTTCGT
ACTGGGATGGTACGACCGTCTGAAGTCTGCCAAAATGGTTACGATATTTT
TGTTAGCCTTTCCCCAAAAGTGAAGCATCTTGGAGCTAAAGATGTCTTCC
GAACATGAAACGGAACTTATACCAGgccaatcaaaaacaaaacaagacgG
AGAGTCCAACGAAGTACGGACGTTGATCAAGAACCCAATACCAGCGATCA
AACATCAGAAGAtttttcacatcgttttgggtgttgcattgtttttcttc
attttgggacttgtgtttttAATATTTGGTGTGTATTCGTATAAAAAATC
GCTGTGTCAAGAAGATGGTAGATCGATCTCGTTGAATAAAGACCAAAaga
aatttcgatctttcctcAAAGACACTTTTAATCTTTATCATGAGAATTAT
CCAAATGAAGCATACACCGACCCGTCATTGCAGCCCCGCcaatatttcga
aaaatttgtccCGTATGATCCGTCCTGGAAGTCATTAAAGTCACGAACAG
ACCACGCAATTAGATTACAAAAAGAACTTAAAGACCTAGATATCAATTTA
TCCAACTTGCGGCCGCGCGAAAAGAAAGCGTACGCGCAGCTGGAGCATTT
CTTGGAATCCATATTTGGGAACCCTTACGATGAGAACTATTACACAGGGG
ACTGGATGCTAGGCACCAATTATGGATGTTGGCAGCGTTTCTGTGAACTT
TTTCAACCACtggataaaatatttcaacataAGAAATTTGTTCCGGAAAC
ATATAATGATTTAAACAAAATTGTTTCCAAATTGAAACTGTTTAAAAACT
CTATTGAAAATTACAAACATAATATTGTGTTGGGTGTTCGTACTGGGATG
GTACGACCGTCTGAAGTCTGCCAAAATGGTTACGATATTTTTGTTAGCCT
TTCCCCAAAAGTGAAGCATCTTGGAGCTAAAGGTGTATTGAAGGAGCGTT
ATACAAAGACTCTCTTGGATTCCAAATACTACGACAAGATCAGCGTGAAG
GATGTGGAGGCTTTCAAAACACAACATAAAGTCAAAAACATCACCGAAAA
AATGTCGGATGTTTTGCTCGATTATTTAGGAAAACCTTTACATGAGTTCA
TCGAGTTTTTGAAAACTAATCACAGCCGACATTGTGTCCCATCGAGTGTC
TCAAGTGGTCTCGCTAACCTTCCTTTGAAACGTGTGTGGCTTGACCAAAA
AGAAACTGACATCGAGACAACACAGAAACTACCGACCGGCGAGATATTGA
AGGGCGCTAAATCATATGAAATGATATTACCGTATTTTACGACAACGTCA
AAATATGACGTCAGTTCGATCAATTCCCTTGgtgaaacagaaaaacaaaa
gctTTACAAAAGAATCAAAGATATTGCTGTCCAAATCATTAAAAAGCCTG
AAGCTGAATCAATCCGAGAATTAAAAATCGATTTAGAGCACCCCcgtcat
tttttcaataccACACCTATTCCTGAGGAAGAAAACGGACAAACCGGGGG
TTCACGTTGTCATGATATGAAAACAGCGAGAAAATATTGTCCAGTTCGTT
ACGAAGCAATGCAAGCTTGGTTTGAGTACGTTCAAATGACGATGGCTCGT
TTACACCCGATGCTGGTCAATATGTTTTACCAAGCCGGTGATAAAGTGAC
CACTCCAAACTGTGCTATTGGTTTGCGAGCTAACTTCAACCCAGGGTTGA
CCTCGCATTTTTACACGCAGAGTGACTCGAAATGCAGCACgcaagcgtat
tataatattccgtttttcacaaaaaaaccgGGACCGAAATACGGAATTTA
TTCGGTGGTTGGACATGAGACAAGGCCTGGACACCATACTCAGGTGTATT
GAAGGAGCGTTATACAAAGACTCTCTTGGATTCCAAATACTACGACAAGA
TCAGCGTGAAGGATGTGGAGGCTTTCAAAACACAACATAAAGTCAAAAAC
ATCACCGAAAAAATGTCGGATGTTTTGCTCGATTATTTAGGAAAACCTTT
ACATGAGTTCATCGAGTTTTTGAAAACTAATCACAGCCGACATTGTGTCC
CATCGAGTGTCTCAAGTGGTCTCGCTAACCTTCCTTTGAAACGTGTGTGG
CTTGACCAAAAAGAAACTGACATCGAGACAACACAGAAACTACCGACCGG
CGAGATATTGAAGGGCGCTAAATCATATGAAATGATATTACCGTATTTTA
CGACAACGTCAAAATATGACGTCAGTTCGATCAATTCCCTTGgtgaaaca
gaaaaacaaaagctTTACAAAAGAATCAAAGATATTGCTGTCCAAATCAT
TAAAAAGCCTGAAGCTGAATCAATCCGAGAATTAAAAATCGATTTAGAGC
ACCCCcgtcattttttcaataccACACCTATTCCTGAGGAAGAAAACGGA
CAAACCGGGGGTTCACGTTGTCATGATATGAAAACAGCGAGAAAATATTG
TCCAGTTCGTTACGAAGCAATGCAAGCTTGGTTTGAGTACGTTCAAATGA
CGATGGCTCGTTTACACCCGATGCTGGTCAATATGTTTTACCAAGCCGGT
GATAAAGTGACCACTCCAAACTGTGCTATTGGTTTGCGAGCTAACTTCAA
CCCAGGGTTGACCTCGCATTTTTACACGCAGAGTGACTCGAAATGCAGCA
CgcaagcgtattataatattccgtttttcacaaaaaaaccgGGACCGAAA
TACGGAATTTATTCGGTGGTTGGACATGAGACAAGGCCTGGACACCATAC
TCAGaGTCAAGGCTTCAACGAACATTTCTCATCCAGTggaaataatgacg
tcatcgattggTTGAACACGATCACTTATTATTCAGCGTTCACCGAGGGT
TGGGCTTTGTACGCTGAGAATCCTTTGTTAGCGGTCGAAACAGATCTTTA
TAAAAATGAGCCGTTGCAAGAATATGGTATGATAAAATGGCAGATATGGC
GCGCCTTAAGATTGGTCGTTGACACTGGATTGCATTTTAGAGaGTCAAGG
CTTCAACGAACATTTCTCATCCAGTggaaataatgacgtcatcgattggT
TGAACACGATCACTTATTATTCAGCGTTCACCGAGGGTTGGGCTTTGTAC
GCTGAGAATCCTTTGTTAGCGGTCGAAACAGATCTTTATAAAAATGAGCC
GTTGCAAGAATATGGTATGATAAAATGGCAGATATGGCGCGCCTTAAGAT
TGGTCGTTGACACTGGATTGCATTTTAGAGgaATGAAATTAAACGAAGCA
CTGAAACTGTTTGCAGAATTTGCATGGGACGAAACGGACCAATCATACAC
CGATGTTGTCCGGTACATGGGGTTACCGGGCCAAGCTACTTCTTATACCA
TCGGACAACTAGCAATcattcaaatgagaaaagaggTGGAAGACGCCCTT
GGAGATGAATTCAATGAAAAGGAATTTCATTACATCATACTTTCGCAGga
ATGAAATTAAACGAAGCACTGAAACTGTTTGCAGAATTTGCATGGGACGA
AACGGACCAATCATACACCGATGTTGTCCGGTACATGGGGTTACCGGGCC
AAGCTACTTCTTATACCATCGGACAACTAGCAATcattcaaatgagaaaa
gaggTGGAAGACGCCCTTGGAGATGAATTCAATGAAAAGGAATTTCATTA
CATCATACTTTCGCAGGGTTCGGCTCCATTGCAATATCTACAAGACTACA
CCAAAGATTTCATACGGTGCAAACTTAAACCCGATTCGTCACCCGATTGC
CCAAGTATACTAGATCCGAAGAGAGCAAATCATCCGAAAATGAAATCCGA
AAAAATCGGGACAGATGAACGTTGGGAGCAAGTGCGAAGCGTTCTTCATG
GACGACACAACAAACATTATCATTGAGGTTCGGCTCCATTGCAATATCTA
CAAGACTACACCAAAGATTTCATACGGTGCAAACTTAAACCCGATTCGTC
ACCCGATTGCCCAAGTATACTAGATCCGAAGAGAGCAAATCATCCGAAAA
TGAAATCCGAAAAAATCGGGACAGATGAACGTTGGGAGCAAGTGCGAAGC
GTTCTTCATGGACGACACAACAAACATTATCATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000253_pilon | genome | sc0000253_pilon:381509..386554 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 2209-2418:4837 |
| Aaloc | 1993-2208:4331 |
| Aaloc | 1753-1989:3173 |
| Aaloc | 844-1752:1612 |
| Aaloc | 1-840:1 |
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