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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000253_pilon:458682..461953- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_031814 ID=XLOC_031814|Name=XLOC_031814|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3272bp|location=Sequence derived from alignment at sc0000253_pilon:458682..461953- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCGAAAAGAAAGACACTTCTATCATGGCTTCAATCCTTTGCACCTGG
TTTCCTTGCCGCTCTTTTCTATGGCCTGGTTTCTGGTTCCATGTCCTTTC
TTAACAAGGTAAGAGTTTGTGCGTTATAATAGTTTTTTCCTTCATGATTC
TAAAGCATTGGAGATACTTGGCACATTAGAAGTAGTTTGAGCTACTTTGG
TAGGGTATTTATCTATTTTATTCGAATCTCAAACAAACATAATGGAATAC
AATTGAACATAATCAAAGCTTTCGATTGACACACCGTCTGGACCATTGCA
ATGTCAGATAAAAACAAAACCCCCTCTGGTTATTCGAATTAAATTCTTAT
CCCCCCTGGAGCTTCGAATAACCGGGAGTCTACTGTACTTTCAATCTGGC
GTTTGTGTGAAAGCTACACGGGTCACACGTTTTGGATTCATTTTTTATAA
GAACAAACTATGGCTGCTGGGGTAGCCAGGGAATAAAAAAGTGGCTTCAT
TACGCATCCAAGAGTTTCAAATCTCTAGCACCTTGAAATCTATTCATTCC
TTATGTTCTCATATAGTTTGTTCTTATAAAAAACGAGAATATGTGATGAG
AAAATCGTGTTTGGGTTTTTCACCATAGGTTGTGTTGACAACATTCAAAT
TCCATTATCCGGATATCGTGATGCTGGCCCAAGTTGTGCTGACGTCAATT
GTGGTGGAATTGTGCAGGGTGACCAAGATGTGCGACATTCCACAATGGAC
TTGGCAGAGGTATAATAAACGGCACACAATTATAAGAGGTAGAAAATGAT
ATCTCGCAATGGGCTATGATAAAACACTTTAAAGATTTCAGGTCAGAAGA
TCTTCAAAAAATTTACTTCGTAAACGCTATGGAAAATATTTCCTGGACTT
GGACTGAATTTTAGGCTTTAGATTAAAATATCGTTTTCGTTTTAGGGGTA
AAGAGTTCCTGATACCAAGTCTGTGTTTTGCATTACACACGACACTGGCA
TTGGCTGCTTTAGCAGAACTTTCCATCCCAATGTAAGTAGGCCTTTAATC
CTCTTTCGTAAAGGATCCTTTTTTTGTTTGAACATATTCCGCAAGAACCT
TTGCATTAGCATGAAATTGCGATTTTCTTTATTTCTGGTTCCAACAATAT
CAAATCAAAATCAAAAATCAAGAATTGAACTTTATAATCCATGAAAAGCA
AAAGTTCCATTCAATGAAAACATTGACTGACTTTCTCTCTTCAATTCGCA
TTTCTCAGATATAATGTTCTGCGACGCATGTTGCCATTGGCAAGTCTTCT
AATGGCAAGATATGTATTGAAAAAGACGCTCTCACGAAAAACTTATGTCG
CAATCGCTTTCACTGTTGTTGGCACTCTTATGGCTGGTATGTGATTATGA
ACCTATGACTTGAATATTTCTTGAACTCGATTAGTTTTATGGTCCCTTGC
TTCAGTTAAGGATGACTTATAAATCTTTTTTTAATAACTCGAAATTTCCT
TAACTTTTGTTCCTCTATGAGTTTTCCATAAACTCCATTGTTGATGTAAT
TATAGTCCAGAACAGCGAGTTCTCGGGTTCTTTAGAAGGGAACAAGATGT
CATTATTTTAAACATGAATATTAAAATTTTTATTAAAAAAACTTTTTAAT
CACTTTAGGCTTTGGCGATTTGCAGTTCAAATTATACGGTTATGTGGACG
CCATTTTGAGTGTGATGGCGCAATCTTTCTACTTGACGTACGTTCAAAAG
ACCGGTATCGAGAAAGGTGCATCGGCTCTTTCAGTTCTTCATTTGAACAG
TATTAATTGTATCCTACCACTCATGATGTATACTTTGTGGAATGGTTCTC
TGCTTCAAGCCGCTCGCTTCGAAGGATTCAAAGACTCATCTTTCAACGTA
AGTTAAAATGATCCATTCTCTCTTTTCAGGAATTCTTTATTTCGTCTTTT
CCTAAGAAAAGTTTAGGTATAAACAAAAATATTAAATACTCTGAGGCCTT
TGTGATGAATGTTCTGATTGTTTTCTTTCTGAGCCAATGAGCTTTCACGT
AGAGGTGGTGTACCTTTCGGCTCACTCAGCTTTTTGATGGTGGCAGAGAA
ATCTACCCTTACCCATGACGAGCCAACAAAAGCGAAATTTCAATTTCAAA
ATTTTTCCACACCTTTATTTTGTAGATGTCGTTCATGATCAATGTTTCCA
TGGGATGTGTGTTAAACTATTCGCTTTTCTTGTGTGCAACTATGAATTCT
GCTCTTACGACCAGGTGAAATTATAAACGATTTTTGTTAGGACCACTGAA
GTTTGGCCTGAGGCTTGTCTTTTCGAAAGTTTTCAGGCTAATTTAGCTTT
ATTACTCACCTGAAGAGTGTAAAAAAACTAGGAACCGTCATTCACTTTGT
CATATTTGAGATCAGACTACTCTAGATTTTCTTTCTAAGGCGCTTTGGAC
AAACAAGACAAATTATGTTTACCTTGTATGGGTCAGTGCTTGTTTTTCTA
GGAACAACACCTATCACTATAATGCACCCCCGCCCCACTTTTCTTCCCTT
CAACTATTCTTCCCTTCAACTATTCGATCACATTCACATACTACGTACGC
ACTGAGGGGAAAGTAGCCCATTTTTTTGCATGTAAAATTCTGTGAAAGAG
ATAAAGAGTGAATTGCTGTCCTCGCGAAATAATAAGCGACCTTAAACAAA
TACATTTCATTTTTGTGTTTTTGACTGCTCATTCTCAATGCAAAAACATA
AAAAGTTTCTAATTAAGTTGTCTTTTTGAAATATAGGCCCAATCCAGACG
ATTGCTTTTCAATTTCTTTTCGTTAGGGAGTGGAAAAAGTACTTACCAAC
AAGGGGGTATAGGTGTATATACGTTCGCTTGCGTACACCTCCCTTCGTGT
AGTAGAGTACACGATTTTTGAAATTTTGTACGTACGTACTATGTTGACGG
ACCCTTAATGCAAATGATTAACCTGAAGTGATTAAAATACTCATCGTCAA
TGAATACAGTGAACACTTGATGGATTCTGAGAAGTCTTTTTAATTTATTC
GATTTTATTTAATCTTTAATTGTTCTTTTCAGTGTTGTCGGTGTTGTGAA
AGGCGTCATAACGTCCATCATTGGTTTCTTTACTTTTGGAGGAGTGCCAC
CCTCCGCCCTTACACTGGGTGGTGTTTCAATGAACGCCCTTGGAGGTGCG
CTTTATACATTCGCAAAATATCGAGAAAAGCAGATATTGTTGCAGAAAGC
TAAGACTGAATTGCCTCTATAA Coding sequence (CDS) from alignment at sc0000253_pilon:458682..461953- >XLOC_031814 ID=XLOC_031814|Name=XLOC_031814|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1944bp|location=Sequence derived from alignment at sc0000253_pilon:458682..461953- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCGAAAAGAAAGACACTTCTATCATGGCTTCAATCCTTTGCACCTGG
TTTCCTTGCCGCTCTTTTCTATGGCCTGGTTTCTGGTTCCATGTCCTTTC
TTAACAAGATGTCGAAAAGAAAGACACTTCTATCATGGCTTCAATCCTTT
GCACCTGGTTTCCTTGCCGCTCTTTTCTATGGCCTGGTTTCTGGTTCCAT
GTCCTTTCTTAACAAGGTTGTGTTGACAACATTCAAATTCCATTATCCGG
ATATCGTGATGCTGGCCCAAGTTGTGCTGACGTCAATTGTGGTGGAATTG
TGCAGGGTGACCAAGATGTGCGACATTCCACAATGGACTTGGCAGAGGTT
GTGTTGACAACATTCAAATTCCATTATCCGGATATCGTGATGCTGGCCCA
AGTTGTGCTGACGTCAATTGTGGTGGAATTGTGCAGGGTGACCAAGATGT
GCGACATTCCACAATGGACTTGGCAGAGGGGTAAAGAGTTCCTGATACCA
AGTCTGTGTTTTGCATTACACACGACACTGGCATTGGCTGCTTTAGCAGA
ACTTTCCATCCCAATGGGTAAAGAGTTCCTGATACCAAGTCTGTGTTTTG
CATTACACACGACACTGGCATTGGCTGCTTTAGCAGAACTTTCCATCCCA
ATATATAATGTTCTGCGACGCATGTTGCCATTGGCAAGTCTTCTAATGGC
AAGATATGTATTGAAAAAGACGCTCTCACGAAAAACTTATGTCGCAATCG
CTTTCACTGTTGTTGGCACTCTTATGGCTGATATAATGTTCTGCGACGCA
TGTTGCCATTGGCAAGTCTTCTAATGGCAAGATATGTATTGAAAAAGACG
CTCTCACGAAAAACTTATGTCGCAATCGCTTTCACTGTTGTTGGCACTCT
TATGGCTGGCTTTGGCGATTTGCAGTTCAAATTATACGGTTATGTGGACG
CCATTTTGAGTGTGATGGCGCAATCTTTCTACTTGACGTACGTTCAAAAG
ACCGGTATCGAGAAAGGTGCATCGGCTCTTTCAGTTCTTCATTTGAACAG
TATTAATTGTATCCTACCACTCATGATGTATACTTTGTGGAATGGTTCTC
TGCTTCAAGCCGCTCGCTTCGAAGGATTCAAAGACTCATCTTTCAACGCT
TTGGCGATTTGCAGTTCAAATTATACGGTTATGTGGACGCCATTTTGAGT
GTGATGGCGCAATCTTTCTACTTGACGTACGTTCAAAAGACCGGTATCGA
GAAAGGTGCATCGGCTCTTTCAGTTCTTCATTTGAACAGTATTAATTGTA
TCCTACCACTCATGATGTATACTTTGTGGAATGGTTCTCTGCTTCAAGCC
GCTCGCTTCGAAGGATTCAAAGACTCATCTTTCAACATGTCGTTCATGAT
CAATGTTTCCATGGGATGTGTGTTAAACTATTCGCTTTTCTTGTGTGCAA
CTATGAATTCTGCTCTTACGACCAGATGTCGTTCATGATCAATGTTTCCA
TGGGATGTGTGTTAAACTATTCGCTTTTCTTGTGTGCAACTATGAATTCT
GCTCTTACGACCAGTGTTGTCGGTGTTGTGAAAGGCGTCATAACGTCCAT
CATTGGTTTCTTTACTTTTGGAGGAGTGCCACCCTCCGCCCTTACACTGG
GTGGTGTTTCAATGAACGCCCTTGGAGGTGCGCTTTATACATTCGCAAAA
TATCGAGAAAAGCAGATATTGTTGCAGAAAGCTAAGACTGAATTGCCTCT
ATAATGTTGTCGGTGTTGTGAAAGGCGTCATAACGTCCATCATTGGTTTC
TTTACTTTTGGAGGAGTGCCACCCTCCGCCCTTACACTGGGTGGTGTTTC
AATGAACGCCCTTGGAGGTGCGCTTTATACATTCGCAAAATATCGAGAAA
AGCAGATATTGTTGCAGAAAGCTAAGACTGAATTGCCTCTATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000253_pilon | genome | sc0000253_pilon:458682..461953 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 784-972:190 |
| Aaloc | 694-780:1098 |
| Aaloc | 457-693:1613 |
| Aaloc | 328-453:2014 |
| Aaloc | 241-324:2327 |
| Aaloc | 109-237:2645 |
| Aaloc | 1-108:3273 |
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