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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000269_pilon:383203..386458+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_031737 ID=XLOC_031737|Name=XLOC_031737|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3256bp|location=Sequence derived from alignment at sc0000269_pilon:383203..386458+ (Clytia hemisphaerica_ch_hm2_pilon)
TCCGACTTCGATCTCGAGTCTCAATTCTTATACAATGACCCACATCCAGT
AAACTCATGTCTGAAAGTCAGTAAAAAATCATGTGGTACTTTCAAAGATA
AACAATTTAAAACTTCACCTTGTTCAACTCGGAGCCCATCCCCTGATGAG
GAATTAAGACAGACACCATTTCGACTGGATAGtggtaaaacctcttttac
cgGACAACAAAACTCAAGAACTAAAGAGAAGTCTTATAGTACAAAGAAGT
CGACTAAAAGAGGATCAAAGACGGTCAAAAGTACTTTAGAAGGTGCTTTC
GATTTGAACAAATCAGAGAATTCGAGGTAAGCATTATTCATATTACTTTC
GGTTGGTGCTTTTGGTTGAGAAGAACGGAAAGCCTGTCATATAGTAAAAt
tatagtccgtataaaaaaccctggcttattgttttaactttttgttagct
ttttcctttattaaatatatcaaaagataaaaatcgatttgctcagtttt
tgatcacgttaccaattactcctcttgggattggtttatgatttaatcac
atgatcaaaaaaaataagtaaaacaAACTGATTTATTAACGCAAGTTCAA
ATGAGAATCAATGGAAGGAAACAAAAGGTTACCAGACCGGgtttttttta
tacggactatggtaaTCTTTTCTGCAAATTCATTATCGACCTCTTCACTT
CTATGGTTGCACTCGTGGCTAATTCTTCTCCATGGTCACATAGACTATCT
ATTTTATCTATATATTTCGTACTAAAAGGTCCTAGGACCTATTATCCGTA
CATATGACCACGATGAAAATGATGGAGAAAGTTTGTTTAACGGTATTTAA
CGTTAATTCTTGAACGGGGTTTGAAATTGTCAGGTTCGACCGTCGGATGT
ACAATGTTTCTCTGACGTCATCAGGTTTATGTCACTGCTATGGACaaaag
accttttcataaattacgttacgaacatcacttgcctcgttttgaaatta
ttgccatggtgattaattcccagcggattttatcaaaactactttataTT
CATAAAATAACCATtaaatgtctcaagggacataatcaccatggaaattg
tttgaatacgaggcaaggaatgttcgtgacgtaatttatgaaaaggtcta
tcagcTATCCATGTTGCGTACGTACAAGAGTTTTGTAATCTTTCACCATA
CTAAGATAGTAAATGCTATCCTGTTTCATTAAACATAGGCTAGGGATACT
GGACTAGAATAACTCCTTGTACTTGATTCTTTTTATAGTGACGAAGAAAC
AGAAGGGTCGAGTAACAGAAGATTTCTGATCGAATCCGATCAAATTCGGG
TTACAATATCGGGGAATAAACTGGCGAAAGGAACATTCAAAATCACACAT
GAATCGAGTGGAAGATCTACACTTCAAAAACAAAGCCAAggtaaaatatt
ctgaaaatatatcttttaacTTCAAAATGATACAACTTGGTAGGGGGAAG
CAGAGTAGACTGGGACAATTGCGTTTAGCTTTAGGCATTGAAATATTTGG
CTAACCCATAATCAGTTTGAGGAAAATTAGTCCCAACCGAAGGTGATGAA
AAGCAAATATCTCGCTTCCCAACTAATGATTATAGCTTTCTCCTCACTTC
TCTATGTTAAATTGGGAAGAAACTATAGGCATCCGTATAAGACTCATGCT
CTAAAGAAATTTAGAatgttcaaaatttcatcagAGAAGTGGAAGATCGT
CTAGGCTTGACGAGGATCAGATTAGGATCCAAAACTAAAAGGTTTTGTTT
CAAGTTATTTTACGATCTTCTGTACCATTATAATACGGAAATGAGTAAGA
GAAATTTCGTGCATGTAGCTAAAAGGTTTTGTTTCAAGTTATTTTACGAT
CTTCTGTACCATTATAATACGGAAATGAGTAAGAGAAATTTCGTGCATGT
AGCTAAAAGGTCTTGTTTCAAGCTGTTTCACGATCTTCTGTACCATTATA
ATACGGAAATGAGTAAGATAAATTTCGTGCATGTAGCTAAAAGGTCTTGT
TTCAAGTTTCTACATTTGTACATGTGGCTTCTCATTTAATAATAAACGAC
TCGGTTATTTCAGGAGAGAAAAGGAGCAGCAAGACCTCCGAAGACAAGCC
TTGTTTGCAATGTTTGAGTCCGTACCAAGCTCGACAGATGCTTCACCGCC
ATACGTTCCCTCTTAAAAGCACATCGATGAGACCCCGAACACGGCACAAA
CCAGTTGTCATTACTCAGCAACCCGTCACTTCAcctttatcaaaatattt
cacacaaaaacaacgGAAAGAACCTGTGAAAGGATTTTCACGCGCACATG
AAAACGAAGCTTACAAGCGTGCACAGGCTAAATACATGGCTAGTGAGCGG
GAAGAATATATTCCACCGACGAATATAATCTCAACTCCTGACTCTTTTTT
AAGGCAAGTATTGAATTatttatacacgcttttttcataagaatacacTT
AAAACACTCATGATgaaatcagccaaaattttaagaatatgaTAAGAATA
TAACCATCATGGATTTTGCAAACTATCCCTCCAGTAAtgctcaaaaaata
ataatcaatACTATcacaaaaatgcaatttttatgCTTCAGATACGTATA
ACATGCCAAATTTAGGTTGAATCTGGATAAGAatacctaagaataccgta
agaatatttttggatgactttcccaaaaagttaagaatatccaataTAAA
ATATTAACGTGTATAGATCAGACCCTGAACTATTGGTAAATCATTGTAAA
CCCGACCCCTGTCTATAAAGCATACCGTTTTCACGTCAAAATTTTtactg
aatcccggaatcccgaaaattgaaaacaataatAACATCGTTACACCGTT
TTGTACAGGTTAAAGATACCggtatattgacaaaaaataagggtAAATAC
CATCACCGTctggttttctttttcttcgtcaaatcccgtaataccgtact
taAAAAGGGTCGATCCCGTCATCACACTTTAGAAGTCCATCTGAAAGTAA
TCAATTGATTGTATTGTTATTTCAGGATGCAGCAACAGCAACAGCCGTTT
AGCAAAAAACCTTTATCTCGATGTTCCATGCAAAAAGCACGCCAAATTCT
AGCACTTGAGAGTATCAAGAATAAACAAGACCATCGTCAAGGAgatatca
aaataaacaaagatggcagaatgAAACCACCAAGAAGAGTCTCTTTTAGC
ATCTGA Coding sequence (CDS) from alignment at sc0000269_pilon:383203..386458+ >XLOC_031737 ID=XLOC_031737|Name=XLOC_031737|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1998bp|location=Sequence derived from alignment at sc0000269_pilon:383203..386458+ (Clytia hemisphaerica_ch_hm2_pilon)
TCCGACTTCGATCTCGAGTCTCAATTCTTATACAATGACCCACATCCAGT
AAACTCATGTCTGAAAGTCAGTAAAAAATCATGTGGTACTTTCAAAGATA
AACAATTTAAAACTTCACCTTGTTCAACTCGGAGCCCATCCCCTGATGAG
GAATTAAGACAGACACCATTTCGACTGGATAGtggtaaaacctcttttac
cgGACAACAAAACTCAAGAACTAAAGAGAAGTCTTATAGTACAAAGAAGT
CGACTAAAAGAGGATCAAAGACGGTCAAAAGTACTTTAGAAGGTGCTTTC
GATTTGAACAAATCAGAGAATTCGAGTCCGACTTCGATCTCGAGTCTCAA
TTCTTATACAATGACCCACATCCAGTAAACTCATGTCTGAAAGTCAGTAA
AAAATCATGTGGTACTTTCAAAGATAAACAATTTAAAACTTCACCTTGTT
CAACTCGGAGCCCATCCCCTGATGAGGAATTAAGACAGACACCATTTCGA
CTGGATAGtggtaaaacctcttttaccgGACAACAAAACTCAAGAACTAA
AGAGAAGTCTTATAGTACAAAGAAGTCGACTAAAAGAGGATCAAAGACGG
TCAAAAGTACTTTAGAAGGTGCTTTCGATTTGAACAAATCAGAGAATTCG
AGTGACGAAGAAACAGAAGGGTCGAGTAACAGAAGATTTCTGATCGAATC
CGATCAAATTCGGGTTACAATATCGGGGAATAAACTGGCGAAAGGAACAT
TCAAAATCACACATGAATCGAGTGGAAGATCTACACTTCAAAAACAAAGC
CAAgTGACGAAGAAACAGAAGGGTCGAGTAACAGAAGATTTCTGATCGAA
TCCGATCAAATTCGGGTTACAATATCGGGGAATAAACTGGCGAAAGGAAC
ATTCAAAATCACACATGAATCGAGTGGAAGATCTACACTTCAAAAACAAA
GCCAAgGAGAGAAAAGGAGCAGCAAGACCTCCGAAGACAAGCCTTGTTTG
CAATGTTTGAGTCCGTACCAAGCTCGACAGATGCTTCACCGCCATACGTT
CCCTCTTAAAAGCACATCGATGAGACCCCGAACACGGCACAAACCAGTTG
TCATTACTCAGCAACCCGTCACTTCAcctttatcaaaatatttcacacaa
aaacaacgGAAAGAACCTGTGAAAGGATTTTCACGCGCACATGAAAACGA
AGCTTACAAGCGTGCACAGGCTAAATACATGGCTAGTGAGCGGGAAGAAT
ATATTCCACCGACGAATATAATCTCAACTCCTGACTCTTTTTTAAGGAGA
GAAAAGGAGCAGCAAGACCTCCGAAGACAAGCCTTGTTTGCAATGTTTGA
GTCCGTACCAAGCTCGACAGATGCTTCACCGCCATACGTTCCCTCTTAAA
AGCACATCGATGAGACCCCGAACACGGCACAAACCAGTTGTCATTACTCA
GCAACCCGTCACTTCAcctttatcaaaatatttcacacaaaaacaacgGA
AAGAACCTGTGAAAGGATTTTCACGCGCACATGAAAACGAAGCTTACAAG
CGTGCACAGGCTAAATACATGGCTAGTGAGCGGGAAGAATATATTCCACC
GACGAATATAATCTCAACTCCTGACTCTTTTTTAAGGATGCAGCAACAGC
AACAGCCGTTTAGCAAAAAACCTTTATCTCGATGTTCCATGCAAAAAGCA
CGCCAAATTCTAGCACTTGAGAGTATCAAGAATAAACAAGACCATCGTCA
AGGAgatatcaaaataaacaaagatggcagaatgAAACCACCAAGAAGAG
TCTCTTTTAGCATCTGAGATGCAGCAACAGCAACAGCCGTTTAGCAAAAA
ACCTTTATCTCGATGTTCCATGCAAAAAGCACGCCAAATTCTAGCACTTG
AGAGTATCAAGAATAAACAAGACCATCGTCAAGGAgatatcaaaataaac
aaagatggcagaatgAAACCACCAAGAAGAGTCTCTTTTAGCATCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000269_pilon | genome | sc0000269_pilon:383203..386458 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 820-999:3077 |
| Aaloc | 481-816:2116 |
| Aaloc | 328-477:1290 |
| Aaloc | 1-324:1 |
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