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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000269_pilon:406708..412130- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_031678 ID=XLOC_031678|Name=XLOC_031678|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5423bp|location=Sequence derived from alignment at sc0000269_pilon:406708..412130- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCAGCCTCTGAACCAGCCCCCGTAGAAGATGTTCAAGGTGATGGACG
GTGGTCCAGTATGGTGAGTTGCTTTATTTTTTTAAGAAACCAATATTTTA
TTTTAGTTTGAACGTTTCTCTTTTTGATGAACCCAATGTTTTAAGTCATG
GTCCTCTTCAAACACTCACTTTATTTCCTAAGGGGCTGCGAAGCCCAAGA
ATTGTAGTGATGATTTTTTTTACCAAAAATTCAATTTTGATCTATTTGAG
AGCCGTTGATTCGATAGCGTTTTTATAAAGCACTTTATATTGTTTTGCAT
TCTATTCATTGGGTCGGGATTGATTCATTTTCAATAAAACTCAAATAGAA
GAAAACTTGAGATTGACGAAAAATAACAAAGAAGTTTTTATATATAGTAG
GGGGCCAAGCCTGGGGTTCCGTGACATCTTTTCTATGACCTAGCCATTTT
TGGTCTATTCCAAAGAACAGTATATTACAAAATATTTTTGAGAGGGAGAC
GCGGATTAGGCCCGGGAAAATTTTTTATGACCAAAATAGTGACGCCATAT
GCAAAACTGCAAGGGAAAATAAGGGGTAGAGAAATAGCTTATTTTTTAAA
GTCAAAATAAACGAAAATTATTTGTACCATCTGATAGAGCATGAAACTCC
GAGCAAAAAATTATATTACAACAACTCTCTGACTAAAACACACAATGGCG
TATGGCGTCACTATTTTTGTCATGAAAAGTTTCCCGGGCCTTTATTTGCG
TCCTCCCTCTCAAAAATATCTTGTAATATACTGTTCTTTTGAATAGACTA
AAAATGGCTAGGTCATAGAAAAGATGTCACGGAACCCAAGGCTTGGCCCC
CTACTAATAAACATTTAAAAAAAATGGTTGTTTGAGGCATATTAACATGT
TTCATCTTTAAATTTTTAGCATCAAAGGCAAGTGGAAAGCTGCAGACTGC
AAAAGCCAAATGTCCTGTTTGTTGGAGACTCACTTATTCAACGTCTAGAA
GATACTGAGGTTTCCTTTGTCTGCCCAATACTGTATTGTTATTACCATAG
TGTCCTCCAGGGTTTGTTCCCCCCACTAAATTCTTGATTTTTTTAAATCT
CCCTCCTCTTTTTTTTTGCCCCTACAGTATATGGCCCCCAAAACGGCGAT
CAAATTTGAAATTTCTCTCAAATCTAGAGGAAAAGAGATTTTACAAAAAT
TTTTGCTGTATAAAAACCTTTAACATCTCTACTTTATTTCCTGGAAGTTC
TTTTTCAAAATTTTCAATTTCAACAATATTTTTCAATCGCTTTAAGATAG
GTAGCTTTTTTCTAATGGCCCCCAAAACGGAGGTTTGAAATTTTAGCGAT
TTCTCGAGTTATCTTTAAGATATGAATACAGAATTTTGACCATAGTTTTG
AAATATGATTTAGAGGGTTTTGGGCATAAATTTATTTGATAAAATTTTTA
CAGTATACCCCTGGTTGTCAAAATGCAGGTTTGGGGCCCCCAAAACGGAG
GGGTAGTTAAAATCAAATTATTAAGGCCAGTGGTAATAGGGGGAAAAACG
ATGAACATATTTGTGTTTTCCCTTAAATTGACGACTCGATGGATGTAAAA
TTTATGATTTTAATGAAATATTTGAAGATTTTCGATATTGCAAAGTCCAA
ACTGAAAATTTAGAAATTTTCAAAATGACAATTTTGATTTAACAACGTCT
CAATCAAGTTTTTGAAAACAAATCTCTTTCGAAAATAGTTCCATTCATGT
ATGGAATAAGCTGTGAAAATTTTAGAAAAAAAGCTCAACTGAAACTGAAA
ATATTAAGCTTTAAAGATATTTTTCTCCTATATTTTGCAAAAAATTGACA
GAATTTGCTGTTTTTGCTGATTCAGCGAAAAATTTTTATATAATGTTAAT
TTTTTGTTATAAACTATTAACTCAAGGAATAGGAGGAATTCCAAGCTCTT
TTCTTTTTCTCATATTTAAATTTTCGGTTTTGTCAACCACGCATGCTGGA
AAAACTGGAAAACCTGGAAAAACTGGAAAAATGGCCTTTTTCTGAAAACT
AGCTGGAAAAACTGGAATAGGTACATTTCCAAACAGGAAAGCTGGAAAAA
CTGGAAAAGCTTTTTTGAAATTTCAATTTCAACTTTATGTCCAGAATGTT
AGACTTTTATGTGATTATACATATATATTTTCATAAGATGTCTAGTTGAG
TTTTAGCCATTTCAGTTTTTGTTCATCAGACATTCTTTTGTCAAAGCATA
GATCTCTATGACCGATTGAAAAATGTCTTTGAAAAATCTAGGTACCAGTG
GATACCCCTTAAACCTACAAAGCTGAAGGGCTCTCTAGCCACCAAATTCA
ATTCATTTGTTTAGTTCACTATTTTACAACCTCTTATAAATGTACTTTCA
TAAAATACCTAATTTCGAGAATTTCAATTATCGCAAAGTGTTATAAAATT
CAAAGTTATCTAAATTTTATCAAGAATCACATCAAAAAATAAGTGGCCCC
CCACTTTTTGGTAGACCATGTCATACGTTTTTAAGAGTTACTATTTTAAG
CTGGTTTGAGACCAAATCAAACCACATAAACTATTATTCTTCCCAATTAG
ATATCGTTTTAAGGTGTTTTGAGGGTGTAAAATGTGAAAAATCTTCTTCG
TCGCCCAACCATGGTGGGCGACATTCTTTTTCCAAAATGTTGGCTCCCTC
ACTCAAAATGGCTCGCCGGGGCCCATACGATGGCTAGCCACGATGGCTAA
AAAGATCTATAGAATATCTACAAGATCTATAAGAATATGAAAATATAATT
CTTCTAAGCCATTTACTTAATCGTGGTTAAAGATTGCAATGCATTGTTAT
CTTTTTTCTCATTTCTTTCATAAAATGAAATACCACAGACAGCGTACTTT
CAACACATAAAGTTTCAGCCTAAAATTCCACCTACGTTTTCTGATAGAGG
GTACCTTTATTTTTTTGTAGGTTTTGAGGGGTATCCGCTGGTAATGATTT
TGCACTCGCTTATAGCTGGAAAAAAGTACAGATTTTTGGGTTAAGGCTGG
AAAAAGGTACATTTTCCAGCTGAAAATACCTGGAAAAAAGGATGTTTTTG
ACCCAAAAAGCTGGATTTTTCATCTAAAATAAGTGTGGCCACCCTGTTCT
AGGGCTCCAAAATACTGGTTGACCTTCAAGATGCTATATCTTTTACCCAG
CCTCTAAAGTCACAAATGTATTTGCATTTTCTGAACGGCATTAGGTGTAG
AAAGTTTCCTATACCCCGTTTTCATAACTTATTTTCAATATCCAAGGAGT
TAGAGTGAGTTATATGCAATTTTTATCTAATTTTGGTGTTAAAATATTTC
CTTTAGACGCAAATATGTTATTTTGAATCCGTCTCAAACCAGCAAAAACA
TGCTCATTCTTAAGTATAACCATCATTCTTTCAAAATAAACAAAAATCGT
TTAATTCTGATAAATCTGCAAGTCAGAATCTTTATTTTAATAAAAACCTC
CGTCTTGGGGGCCGTCTCCGTTTTGGGGGCCATATACTGTATGACTTTTC
AGTTTTTTAGTTTCCCCCCTCTTTTGCTTTACCCCCAGAAAATTCTGAAA
ATATCAGTTCCCCCCATATACCCATATAAACTTCTCAAATTTCAACCTGA
CACAAACGGAACGAAAATGGGTTCCTACTGTAGATGCTAAATGCAACATA
TTCAATAAACAGAAAAACTATAGGAACAATAGGAATTTTCAAATCAGTTC
TTAGCAGAATATTTTTATCAGAAAATAACAATTTCTTTGTTTATTCAGAC
GTGGGAAGATACAATTAAACCATTGAATGCTGTGAACGCCGGGATAGGTG
GCGACCGGACTGAACATGTTTTATGGCGACTACAAAATGGCCTTCTTCAA
CATTGTAAACCTAAAGTATTTTTATTATGGTTTTTCAACAATATTCACGA
CTCTCTGATTGACTTTATTACACTTATGTATGTTTTATTGACAAAATTTC
TTACTCCTAAAAACTATTACTTTTATTCTTTTATCCTTTTTATAATCATT
TGTCACAAAAAGTTATTGCAGCGAATTTTATAGCCTCTAGAAGGAAGCTC
GTTGGGGTCGGAAACTTTTTTCCACCTCAGCGCACCGTGTTCTAGAGGCT
ATGACTTTTGACACAATAGTTTTAAGTAAAAAAAAATATATAAATTTAAT
CTTGTCACGTTATATTTTGTTTTCTCCAGGTCGTTGTTATTTTGTGTGGT
ACAAATAATCACCAGCATTCATCTGATGAAATTGTGGATGCTCTTGAAGC
AATCTGTTGGAGTGTGGCAGATGTACTGAAAGACACTAAGATCGTTCTTA
TCGTAAGAATCATAACGTTCTCCTTTAAAATACTGAAATTATTATCTTAA
CTGTATATTCGAACTTGGTAATTTGAATCTCTTTGTAATTCGAACAAACA
AGATTCCCTGTTCGAATTCGAATCCACGAAAGTCGACTTTAAAAGACTAA
CCCTTTGACGGAAATCCCTCACAATCCCATGTTGCTCTATTTTTAAGTCT
GCCAGTGGCTTTGACGGATATGGCTCAGATAATTGCACTGAGTCGTAAAA
ATTTATGATTTGTTGGTCCAGGATACAATAGATATGATGAAACTTTCACC
GCGCTGAATCTAAAAATAGATTTTATTTTTGACATAATCATTACTCTCGA
TGTGTTTGTACGAGTTCCAATCCCATCAACCTTTGCGTTAATCTCTTTTG
TACGTTAATTACATAATTTGACAAAGGATATTTAACAACTTGCACGTATC
TTTGATTGAGCCGCATTGAATTGTGGGATTGCAACTCGTACAAATGTCTA
AAAAAGTGAAAAGTAATAATTATGACGTATATGTTGCGGAGCGCTATTAT
AATACACCTTTTCGACCGTAGCCGCCAATTACCGCGCGGGCATTTTTTTG
TCCGCTTCATCCCACCAAAACCGTCCCAGTCCTTTTTTCGCACCTATAGA
CAATAGAAAAATGTGTCAAAAAAGGGTTGGATCGAGTTTAAGGGGATAAT
TAAATAATTAAGTGGCACGCGCCTGACCGCGCGACTACGGTCGAAAACGA
TAATTGATATATCTTTTCTGAAGGCTTTGCTACCACGTGGAGAAAAAGAC
AATCCATTGCGTAATAAAATCTATCAAATCAATTACGGTATCGAACAGAT
TATATCAACCATTCCGAACACTCATTTAATCAATGCTGACCCTGGGTTTG
TTCGTTCAGATGGTGTCATCTTTCCTGAAGACATGGCTGACTATTTACAT
TTAACACGCCGCGGGTATAAGAAGTTTTGTGTCCCCATCATGTCGTGTGT
GAAGAAGTTTCTGCAAGAAGATGCGAAAAAGGAAAAAGCTTTTAATAATA
GTATTTATACTTTCCATGAGTGA Coding sequence (CDS) from alignment at sc0000269_pilon:406708..412130- >XLOC_031678 ID=XLOC_031678|Name=XLOC_031678|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1386bp|location=Sequence derived from alignment at sc0000269_pilon:406708..412130- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCAGCCTCTGAACCAGCCCCCGTAGAAGATGTTCAAGGTGATGGACG
GTGGTCCAGTATGATGTCAGCCTCTGAACCAGCCCCCGTAGAAGATGTTC
AAGGTGATGGACGGTGGTCCAGTATGCATCAAAGGCAAGTGGAAAGCTGC
AGACTGCAAAAGCCAAATGTCCTGTTTGTTGGAGACTCACTTATTCAACG
TCTAGAAGATACTGAGCATCAAAGGCAAGTGGAAAGCTGCAGACTGCAAA
AGCCAAATGTCCTGTTTGTTGGAGACTCACTTATTCAACGTCTAGAAGAT
ACTGAGACGTGGGAAGATACAATTAAACCATTGAATGCTGTGAACGCCGG
GATAGGTGGCGACCGGACTGAACATGTTTTATGGCGACTACAAAATGGCC
TTCTTCAACATTGTAAACCTAAAACGTGGGAAGATACAATTAAACCATTG
AATGCTGTGAACGCCGGGATAGGTGGCGACCGGACTGAACATGTTTTATG
GCGACTACAAAATGGCCTTCTTCAACATTGTAAACCTAAAGTCGTTGTTA
TTTTGTGTGGTACAAATAATCACCAGCATTCATCTGATGAAATTGTGGAT
GCTCTTGAAGCAATCTGTTGGAGTGTGGCAGATGTACTGAAAGACACTAA
GATCGTTCTTATCGTCGTTGTTATTTTGTGTGGTACAAATAATCACCAGC
ATTCATCTGATGAAATTGTGGATGCTCTTGAAGCAATCTGTTGGAGTGTG
GCAGATGTACTGAAAGACACTAAGATCGTTCTTATCGCTTTGCTACCACG
TGGAGAAAAAGACAATCCATTGCGTAATAAAATCTATCAAATCAATTACG
GTATCGAACAGATTATATCAACCATTCCGAACACTCATTTAATCAATGCT
GACCCTGGGTTTGTTCGTTCAGATGGTGTCATCTTTCCTGAAGACATGGC
TGACTATTTACATTTAACACGCCGCGGGTATAAGAAGTTTTGTGTCCCCA
TCATGTCGTGTGTGAAGAAGTTTCTGCAAGAAGATGCGAAAAAGGAAAAA
GCTTTTAATAATAGTATTTATACTTTCCATGAGTGAGCTTTGCTACCACG
TGGAGAAAAAGACAATCCATTGCGTAATAAAATCTATCAAATCAATTACG
GTATCGAACAGATTATATCAACCATTCCGAACACTCATTTAATCAATGCT
GACCCTGGGTTTGTTCGTTCAGATGGTGTCATCTTTCCTGAAGACATGGC
TGACTATTTACATTTAACACGCCGCGGGTATAAGAAGTTTTGTGTCCCCA
TCATGTCGTGTGTGAAGAAGTTTCTGCAAGAAGATGCGAAAAAGGAAAAA
GCTTTTAATAATAGTATTTATACTTTCCATGAGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000269_pilon | genome | sc0000269_pilon:406708..412130 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 394-693:301 |
| Aaloc | 271-393:1195 |
| Aaloc | 154-270:1626 |
| Aaloc | 64-153:4505 |
| Aaloc | 1-63:5424 |
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