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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000067_pilon:306293..309338- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_031560 ID=XLOC_031560|Name=XLOC_031560|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3046bp|location=Sequence derived from alignment at sc0000067_pilon:306293..309338- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATGAAACCCGAATCATGAAATTGTTTAAAAGCGAAGATGTAGACTG
TCAATTACTGATTCAATACAGTAACGGAAGTGTCAAAATGCTTAATTATC
TTGGTAATATTTCTTAACACCGTTATGGAATGACCGTCAATGCCACTAGG
CGTTGCCTGAATTTACGTACGATTGGTTTTAGGAGTTATTTTTCCTTCAA
AAGCTTATATAAGATACCTCAATTTCTGATCTATGGCAGTGACCAACAAA
TTAGAATTTTATGCCTTACCACAACACAAGAAAACTGAGGAAAAGCGTCG
TTTATTTTATAGTAGTAGTAGAGTAGATTTGTTAAGATTTTTAACTTGGA
GATATCTACACTGCTCAGAGCTGATATCAGTGCTTAGTTTCTAAAAGACA
GGCTCAACGTGTTTTTTTTATAATTAGACGGTGCACTGAATTATGGGAGC
TTGGACGAATTGACGCTTCTTCATTCTTGTGATTCTGTTGCATCTCGGGA
AATCAACGGCAAGAGATATGTTTTTGGACTGACGTCACACTTCCGTTTAT
TTATGAATGATAAAGAGGTACGTAGGGTTAATCAGAAAATCATCCATCAA
CCTTAAGTTAACAAATCAAGAAAAATGTATTCAAGTTTACTTGGGCCGAA
TCTATCTGGAAGCATGATGATTTAGACTTTCAAACCTGATATGAACGAAC
ACAATGTCCTTTTAGCTTAATGGGTTGATTGCTGTAAATAACTGAGCGAT
ATAGTTATTAGAGAACTAGTGATTTATTGGGAATAGTTGACTCCTTTACA
TAGTACAATTTTGATAAAGACACCTTCATAATATCTTTCTTTCAGATAGC
GAACAATTGTACATCCTTTTTCATCCATGATGATTTTCTATTACTGACCA
CGCATGCGCACTCGTTGAGATGTGTTTACATTAAATCGTTAGGTGAGTAA
TCAACTTGGTATAGTAGAATGGTAGGAATGATCGTATTCTGATCTTGATT
CGCCGAACCCTGCACGAATCGACCACGTCACCTTACGCTACGGGTATCTC
ATCACCCTAAGTGACGGTCAAGGTTACGGAAGAGTCAGCTCTTATACAAT
ATCGGTCAAAGTATATCGAGCATTTTGCTTAATTCCTCTTTTTTAACATT
TCAAAGTTCGGGCGAGAAAGTGGCTTTTGGGCTATTTGTTAGATTTAATC
GAATATTTCTTTTTAGGTGGGGTTTATAGACTTCCAGGCCATATTCTGAA
CCCTATTGGACCGTTTTTGAACTTTTGGATCCTCAGATCCTAAGGTCCTA
AGACTCAAGTCTCATGTTAAAACTCAGACTTAAAACACTACTCTTCCATC
CTAAGTTAGAGTGCTTCCAAATCGATAGTGGCTATAAGATTTCGTGGGAA
TTTCCCTTTTTTTCTCAAATATTATGGCCGGTATTGTAGGAGTAACTTAG
GCAGACTTAGGACCCTAAACATAAATAGTTAAATAAAATTCAAAACTTGG
CTTATTCTTTTACCTTTCAAAATTAATATGAATGGCCTTTCCATGTGATT
TAATCTGAATAACTAGAAAAAGTTTTCTTTTTACTACTCCCCATTTGGCT
TGAAGCACGCAGTCACCATGTTCGATGGAAACCAAAGACCCTTTCTTACA
CCTTTAACTTTTTACAATAACACTTCGTTTTTCTAGTTCAAAATGCAGAA
ACGCAATTAGACAACATTGCTTTTGACGAAGCATCACGCCGAGTTGAAAG
AGGATCAAAACTCGTCACAGCTGTCATGCAAGGTACTGCCGTTGTTTTGC
AGGTAAGTTTATTGATTCTTAAGAAATTTCACTCGATATTCTGGCCATTT
ATATCATTTTTAAATATTGTTTCAAAACACATTCATCCATATCCTGTTTG
ATTTCTTATTTCTCTATAAATTCTATGCGTCATAGTACATCATGGTACAC
AATCGAAAGAAAATTTATTAATACAACAGCTAAAACGACTAATACAATCG
ATTCTCAAAGGAAATTGGATTGAATCAGAGGACGTACAGAATAGGAGGGC
GTACAGAATAGTAGGGTGTCATTTCTGAGGGTGTCGTTGTTGGTGTCAAT
TGACTTGTTGAAATCAAGCTACCATCGTTAAGATAGAAAATTTGATTATA
GTGAGAGCCAAGTTTAGATCTTTCTTTGTTCTTTCTTAGATGCCACGTGG
GAATTTAGAATACAATCACCCCAGAGCTCTTGTTATCACTCATCTTCAAA
AATTGCTGAACAGGTAAACACGTCCAACTTTTCTTTGAATGCGAATCGGT
ACACGTTTTGTTTATGCGAACATTCAACATTTTTTGAAGACTTTGGATGC
TCCTAACCTTTTTGAATTTGAAGCCTAAAATGTTCTTATTTTCACCGTTT
TGCGAGACTGCGGCTGCAAACTTACTTACTTTCTTAAGATGTTCTGTGAA
GGATTTCATTTCCGTATCGTTACAGTTTACACTACAAGCAAGCACTAGAA
ATCATGAGAAAACATCGAATCAATTTGAATCTGGTCTATGATAATGATCC
TCAGGTATTGATATTTTGTACGTCTTTAAAAAAGATAATATGTTTTAAAT
CCCTTTGACTAAGATTCTGGTCTCTAAACCCCTCCATTCACAATTAGAAG
TGGCCCCTTTCTCTTTATATATAGAATAAATTTGAGCCAAAACCTTGGAA
CAACCTAATCCTGGGATTTTTAGAAATTACTAAAATAACACTGATTCTAA
GACCGTTTTACTCTCTAAATTAAAAAAAATCTCGAATATGGAATGATCAA
GAATAGCCTAGACCTAGTGTTCAAATGTAGTCTTATCTAAGTCTGATACA
TTTCCTCGGTCATCGCTTGGTCCTAGGTTTAATTATTGAGGATTCTTTTC
GCTCCTTTTTAGCGTTCCCTTGTATCTGTTTATTTCATTTTTGAAAACTC
TATTCGTCATCTTTTCAGCTCTTCTTGAAAAACGTGGATACTTTTGTTAA
CAACGTCAACTCTTCAAACCGAATCAATTTGTTTCTGGCGGATTTA Coding sequence (CDS) from alignment at sc0000067_pilon:306293..309338- >XLOC_031560 ID=XLOC_031560|Name=XLOC_031560|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1374bp|location=Sequence derived from alignment at sc0000067_pilon:306293..309338- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATGAAACCCGAATCATGAAATTGTTTAAAAGCGAAGATGTAGACTG
TCAATTACTGATTCAATACAGTAACGGAAGTGTCAAAATGCTTAATTATC
TTGATGAATGAAACCCGAATCATGAAATTGTTTAAAAGCGAAGATGTAGA
CTGTCAATTACTGATTCAATACAGTAACGGAAGTGTCAAAATGCTTAATT
ATCTTGACGGTGCACTGAATTATGGGAGCTTGGACGAATTGACGCTTCTT
CATTCTTGTGATTCTGTTGCATCTCGGGAAATCAACGGCAAGAGATATGT
TTTTGGACTGACGTCACACTTCCGTTTATTTATGAATGATAAAGAGACGG
TGCACTGAATTATGGGAGCTTGGACGAATTGACGCTTCTTCATTCTTGTG
ATTCTGTTGCATCTCGGGAAATCAACGGCAAGAGATATGTTTTTGGACTG
ACGTCACACTTCCGTTTATTTATGAATGATAAAGAGATAGCGAACAATTG
TACATCCTTTTTCATCCATGATGATTTTCTATTACTGACCACGCATGCGC
ACTCGTTGAGATGTGTTTACATTAAATCGTTAGATAGCGAACAATTGTAC
ATCCTTTTTCATCCATGATGATTTTCTATTACTGACCACGCATGCGCACT
CGTTGAGATGTGTTTACATTAAATCGTTAGTTCAAAATGCAGAAACGCAA
TTAGACAACATTGCTTTTGACGAAGCATCACGCCGAGTTGAAAGAGGATC
AAAACTCGTCACAGCTGTCATGCAAGGTACTGCCGTTGTTTTGCAGTTCA
AAATGCAGAAACGCAATTAGACAACATTGCTTTTGACGAAGCATCACGCC
GAGTTGAAAGAGGATCAAAACTCGTCACAGCTGTCATGCAAGGTACTGCC
GTTGTTTTGCAGATGCCACGTGGGAATTTAGAATACAATCACCCCAGAGC
TCTTGTTATCACTCATCTTCAAAAATTGCTGAACAGATGCCACGTGGGAA
TTTAGAATACAATCACCCCAGAGCTCTTGTTATCACTCATCTTCAAAAAT
TGCTGAACAGTTTACACTACAAGCAAGCACTAGAAATCATGAGAAAACAT
CGAATCAATTTGAATCTGGTCTATGATAATGATCCTCAGTTTACACTACA
AGCAAGCACTAGAAATCATGAGAAAACATCGAATCAATTTGAATCTGGTC
TATGATAATGATCCTCAGCTCTTCTTGAAAAACGTGGATACTTTTGTTAA
CAACGTCAACTCTTCAAACCGAATCAATTTGTTTCTGGCGGATTTACTCT
TCTTGAAAAACGTGGATACTTTTGTTAACAACGTCAACTCTTCAAACCGA
ATCAATTTGTTTCTGGCGGATTTA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000067_pilon | genome | sc0000067_pilon:306293..309338 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 610-687:79 |
| Aaloc | 532-609:571 |
| Aaloc | 457-528:858 |
| Aaloc | 343-456:1359 |
| Aaloc | 244-339:2202 |
| Aaloc | 106-243:2618 |
| Aaloc | 1-102:3047 |
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