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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000112_pilon:1073471..1076982- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_031548 ID=XLOC_031548|Name=XLOC_031548|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3512bp|location=Sequence derived from alignment at sc0000112_pilon:1073471..1076982- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGGAACAAATGAAAGAACTGAAAGACAGATACACCATCGTCCCTTC
ACAGGTATCTTTCCTTTCAAGGTCTACTTTGGATGATTTTTTATACAAGA
TTGTTAATTTTTGCGCCTCTTCGTTTTTTTCTCGAATCCATAAATAGCAG
TTATTTAGGCGAAAAGAGGGAAAACTTCTCACAAATGGGCATACCAAAAT
TCCAATTTCTTCAATTAACACCTCCACTCTTGTTAAAGCAATCGCCTCCT
TCCCCCCTAGTACCAGAAAGGCTACCACCATGTTCATAAAAGGCTCACAT
AAACACTGATATTAGGTGGAAGGGATTTTTCAAGAAATTGCCACATATTT
TGTCACTGATTGTAGATTTTTTAATCTTCTTAAAGCGCATTTCAAAGGCT
GGCGAGAAAGAAAGTGAGACATGGGTCAGGACAAGGGACTTTAACAGATC
TTTATCTCTTTCGTATTTAGATCAAACTGGTGGAAAAGAAATTACATTAT
TTGGCGGAAGGATTTGAAGATTATAAGAAACAACAAAACACACTTCAAAA
TGCAATGTCTACCAATAATGAGTAAGTACACCCCTGTGTCATAGACCCCT
GGGTCCCCAGCCCCACTGGGAAATTTGAGTAAAAATTTGTCCTCGGTGGG
AATATACCTTGGAAAAACAGCCCCGCTGGGAAATTGACTTTGATTTCATC
CCCAGTAGAAATTCAATGTTTAAAAATTGCACTTCAAAACCATGCCCACT
GGATTTTTTAATATTAGAACAATATAATTTCTACCCCCATTGGGATTTCA
ATAGGAATTTTTATCCCCACTGAAGAAAAAAGTTTGACCGGGACTGTGAG
CCAGGGGTGTGTAAGTGCAAGTCTCTTTAGCTACCGTCGTTTGGAGGAGG
GGGTAAGTTTCCACTCTCAGAAGACTAACCCCTGACTAAGATCGCTCACT
TTTCGACTTTTTCAGAATGACTCTACTGTTTTCCAGGATAGCCATCTAAA
AACTGTAAAGAGTTTTTTCAAGAAGTACGGAAAATACCTAGGGTTGACTA
AGGAAGCTTTTTTAACTAGCTGGAAAACTTGTCTTTTCCCGCTAGAAAGT
GAAACCTTAGTGCGGAAAAGGGAATCTTATAAAAAAACGACGATAATTGA
CTCCCACCAAATGGAAGTCAGTTGAAATGTCTCTAGTTCAAGAGCTGTTG
GCCTTTTTATTAGGTCATAAGCCTTAGGGCTTAAATTTAGGTCACGAACC
TCATGGCTGAAATTTTGCAGGTGATTAGTACAACCCTCAGCCAAAGAAAG
TAATAATCGATTGAGATGTTGAGATGCATGTGTGCGCTTTGTTTAGTTTT
CAAAGTTTTACAGACTGATTGATTGACTTTTCATTTATCATCTTTACTTT
CTTTAGACCTGTTGGGACAGGCAAAAATGATTTAGCAAGCAATGAGAAAT
ATGAAAGGGTAAGTTTGATACGTTTTTCACTACACCATAAAATATATTTT
AAAGGGATTCTTTATCAAATTGCTTTAGGTCTCCTTGATAATATTTTCAA
TTTTATACTTCGTAATTTTTTTTTCATTTCATTAAGTTGCGATTCGCAAA
CTTCATGAAACATAATTACCGTAAATTAATATACGAAACTCATTATCAAG
ATGAACCCTCCAAAGTTTCAAAGGCTTTCTAGCGGAAAAAAAACTGTTTA
GAACTACGGTTCTAGGAAAAAGAGACACGTTGCAAAATAGCTTCATAATC
TTGCTACTATATAATCTTTTGAACTTATCATTTTTCAGTTGGAAGTGCGC
GTTGACAATATAAAGACCGTATTAAATGTTTTGAAAGATGTTCTTACAGA
CAAAGTCAATGATGAACACTCCAAGGTGAGATTTGGTTTCTTGGCGTCAA
GTTTTGACTTGTTAATAATCGGGTCATCCAAACTTTTCTAATGAGTATTC
ATTAGAACAATTTTACCCCACCTCCAGTCAGTAAAATTTCTCGAAAAATT
CAGAAGTCTCTTCAAAATAGGTGAGAATTCAGGCCCAAAGATTAAGTTCA
ATCATTAAATTTTTAAACTGCTTTCTCTTATGCCTGCCTCCCTTAACTCT
TTCAATACTGCCCAACTAAATTTCCTTTACTTTTGAACAATTTTTTCGGT
AATTTTCATTGACCTAATTTAAGTGATTGAAAGTGATAGACCCTGAAAAG
AGCTTTCCCACGAACCCATTTTTTGCTTTAGCCAAAGATTGCCATAAATT
GCATTTGAAGTTGATATACCGTAGCTTTGAAAAACCCTTAAATTTCAGTT
TTCTATAGTACTGAAGGAGATGATGTCTACTGCACATTGTCATTGTCTTT
AATATAACTTTCATTCCCTACATAGAACAAGACTGAGAAACTGCTTGCAG
ATCTCAAGAAACGTTTGGACGAATTGAACATGATATCTATGGAAAAACAA
GAAGAAGATGAAGATGAAGAAGAGAGTGAAGAAGAATCCGAAGAGGAAGA
AGAAGAAGAAAAAGGTGATGGGAAGCCTGATCCCACCCTTGACGATGATG
AAGAAGAAGATGAAGACGATGAGGAAGATGACGATGAGGAAGAAGAAGAA
GAGAGCGAAGAAGAAGAGGAGGAAGCTACCCCACCTAAAAAGGTAAGCAT
CCCTGCATTTGGCATCTATATTGAAATGGATAAGCATCCCTATTGCATTG
GATAAGTATCCGTATTGAAATGGGTAACCATCCATATCAGAATAGGTAAG
CATCCATATCAAAATAGGTAAGCATCCATATCAAAAATGTGTAAGCATGC
TAAGCACCCGACGATAAAAAAGGGTAAGCGCCATTGAGTTTCAAGCCCGA
AGGGCTAGAGGTCAATCTCTAACCTTTCTCAGGCAAGAAAAATTGAAGCC
TTAAAATATGCGCCGTATTTTTGATGACGGATTGAATCTAGCAATTCCTT
TGTTTTCGAGTGATATATTTTTCAAAATGAATTGGTAAATTTTAGTTTCA
ATCTGTCATTTGTGTAAAAACCAGGCGGGTCGCTCAAGGCCGCGCAACTT
TGGTAGGATTTGTTGGCTTCAAATCCTACCAAGGAGATTGACCTCTAGCC
CTTCGGGCTTGAAACTCAATGGTAAGCGCCCTATTGAAAAGGGTAATTAT
CTTTACAAAATTTGACTGTATTGTTTTGTTAGGAACCTAAAAAGAAGCCA
AATAAGAATGAACTTCCAAAACCTGAAACAGAAGAAGAAGAAGAAGAAGA
AGATGAAGAGGAAGATGAAGACGAGGAAGAAGATGAGGAAGAGGAGAGTG
AGGAGCAGGAAGAAGAAGGGGAGGAAGGTGACGAAGAAGAAGAAGATGAG
GAAGAGGAACCCAGTAACCGTCCTGATTCTTCAAGGAGTTCTGTCCTAGA
AATGGCTCTCAGTCGTGAAAATAGTATAGCTCCCGCCGAAAATTCTTCTA
AAAAGAAACCAGGTGCTGGGGCTGCTATTAGGAAACTACCCTCAGGTGGC
AAACGAAGATGA Coding sequence (CDS) from alignment at sc0000112_pilon:1073471..1076982- >XLOC_031548 ID=XLOC_031548|Name=XLOC_031548|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1782bp|location=Sequence derived from alignment at sc0000112_pilon:1073471..1076982- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGGAACAAATGAAAGAACTGAAAGACAGATACACCATCGTCCCTTC
ACAGATGATGGAACAAATGAAAGAACTGAAAGACAGATACACCATCGTCC
CTTCACAGATCAAACTGGTGGAAAAGAAATTACATTATTTGGCGGAAGGA
TTTGAAGATTATAAGAAACAACAAAACACACTTCAAAATGCAATGTCTAC
CAATAATGAATCAAACTGGTGGAAAAGAAATTACATTATTTGGCGGAAGG
ATTTGAAGATTATAAGAAACAACAAAACACACTTCAAAATGCAATGTCTA
CCAATAATGAACCTGTTGGGACAGGCAAAAATGATTTAGCAAGCAATGAG
AAATATGAAAGGACCTGTTGGGACAGGCAAAAATGATTTAGCAAGCAATG
AGAAATATGAAAGGTTGGAAGTGCGCGTTGACAATATAAAGACCGTATTA
AATGTTTTGAAAGATGTTCTTACAGACAAAGTCAATGATGAACACTCCAA
GTTGGAAGTGCGCGTTGACAATATAAAGACCGTATTAAATGTTTTGAAAG
ATGTTCTTACAGACAAAGTCAATGATGAACACTCCAAGAACAAGACTGAG
AAACTGCTTGCAGATCTCAAGAAACGTTTGGACGAATTGAACATGATATC
TATGGAAAAACAAGAAGAAGATGAAGATGAAGAAGAGAGTGAAGAAGAAT
CCGAAGAGGAAGAAGAAGAAGAAAAAGGTGATGGGAAGCCTGATCCCACC
CTTGACGATGATGAAGAAGAAGATGAAGACGATGAGGAAGATGACGATGA
GGAAGAAGAAGAAGAGAGCGAAGAAGAAGAGGAGGAAGCTACCCCACCTA
AAAAGAACAAGACTGAGAAACTGCTTGCAGATCTCAAGAAACGTTTGGAC
GAATTGAACATGATATCTATGGAAAAACAAGAAGAAGATGAAGATGAAGA
AGAGAGTGAAGAAGAATCCGAAGAGGAAGAAGAAGAAGAAAAAGGTGATG
GGAAGCCTGATCCCACCCTTGACGATGATGAAGAAGAAGATGAAGACGAT
GAGGAAGATGACGATGAGGAAGAAGAAGAAGAGAGCGAAGAAGAAGAGGA
GGAAGCTACCCCACCTAAAAAGGAACCTAAAAAGAAGCCAAATAAGAATG
AACTTCCAAAACCTGAAACAGAAGAAGAAGAAGAAGAAGAAGATGAAGAG
GAAGATGAAGACGAGGAAGAAGATGAGGAAGAGGAGAGTGAGGAGCAGGA
AGAAGAAGGGGAGGAAGGTGACGAAGAAGAAGAAGATGAGGAAGAGGAAC
CCAGTAACCGTCCTGATTCTTCAAGGAGTTCTGTCCTAGAAATGGCTCTC
AGTCGTGAAAATAGTATAGCTCCCGCCGAAAATTCTTCTAAAAAGAAACC
AGGTGCTGGGGCTGCTATTAGGAAACTACCCTCAGGTGGCAAACGAAGAT
GAGAACCTAAAAAGAAGCCAAATAAGAATGAACTTCCAAAACCTGAAACA
GAAGAAGAAGAAGAAGAAGAAGATGAAGAGGAAGATGAAGACGAGGAAGA
AGATGAGGAAGAGGAGAGTGAGGAGCAGGAAGAAGAAGGGGAGGAAGGTG
ACGAAGAAGAAGAAGATGAGGAAGAGGAACCCAGTAACCGTCCTGATTCT
TCAAGGAGTTCTGTCCTAGAAATGGCTCTCAGTCGTGAAAATAGTATAGC
TCCCGCCGAAAATTCTTCTAAAAAGAAACCAGGTGCTGGGGCTGCTATTA
GGAAACTACCCTCAGGTGGCAAACGAAGATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000112_pilon | genome | sc0000112_pilon:1073471..1076982 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 562-891:331 |
| Aaloc | 295-561:1138 |
| Aaloc | 208-294:1725 |
| Aaloc | 157-207:2106 |
| Aaloc | 55-153:3043 |
| Aaloc | 1-54:3513 |
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