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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000210_pilon:372263..380242+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_031519 ID=XLOC_031519|Name=XLOC_031519|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7980bp|location=Sequence derived from alignment at sc0000210_pilon:372263..380242+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAGAGTCTGAAGTGAGAAGAACTTCTGATCCTCGAGTTGTGAGGAA
GATTCATTCTGCAATCaaaaaaaCATGTGAGCAAAAACAATGTCCAATCA
TGGAAAGGATTCAAAGAGCCTTGGCCATTGATAAAGTACAAATCACACGT
TCACGAATAGAGCTTCAACTGAAAAATGCAATCAAAGATGGACTGATCAT
TGAAAGCAGTGGTAAATCAGGCAAAACTACTTCCATTTCTGAATCAAAAT
CTTCATCATTTCGGGTGCCAACTCAAGAAAACTTTTATGAGgtatgaagt
tttttttaacatttagatttagatttagaATAAAGTGTTCATTTGGTAAA
GTTTATTCTGCTTAATGCTAACAAGTTTATCTTTCATATTGATTTGATTA
CGCAgtgttaaagggataatcagatggtctctgagatattttgcctgtag
atagcttctaggattttaggaaaaacctctaaatttttcggtgtacttat
tttcctaactcaagttatgccaatttgaaatctcagaaaatgggactttt
cagggacttttcacatttttttctattgttttcaagcaaaggttcaaaat
ttcaaattggcataacttgagttaggaaaataagtacaccgaaaaattta
gaggtttttcctaaaatcctagaagctatctggAGGCAAAATATcacaga
ccatctgattatcccttcaAGCAAGGCTAATTTTGTAGTTTTTCAACAAT
TGAAAATGAATCCAGACCCAATCAATCAAACTTGTTGAACCATTCAAACA
ATCATACTCCATCAAACTATTAAACATgaagatttttctttaaattgtga
gtgtttgattaggccgatgaaatttatatatgagtttaccgtcggccacc
cgcatctctaaaaagcacccgcatgaaaatttcattattttcaaaattca
taaatttttcattatttccatatttctttacaactacaacctctatcttt
gttaaaatcgtctctacgcatgtttacacgggtaaacaaagaagatttat
tacagaaaatgctgccgccctcaatcctacaactgcagtgggcgtcccgc
ccatatatctgccaaaccgccctgaccgccattttagttttttgcaaaat
ctagcgccactgtagcaatcgatctttatttttcgttcgcaaaagatgcg
aagggttgaagcgaagcaaaattttttgttttgagagagcatgattggca
gaaatggtggataaggtgctgttgggaaaataatgaataatgaaatcatg
ccgcatctatttttgggtaagttcacgacggtaaactcatatgtaaattt
catcggccttaaGTACGATCAACTGTTTGGCGgttcgatagaccttttcg
ccacATTCggccagacccgatcaatcgaacttgtcgaaccaatcgaacag
tcgaactaatcaaactccatcgaacgattaaagttcgattaaaaaaatta
atcgaacctaatcgaacactcacaatttttgaagcaatagcagttcgtca
ggaaaaagttcgattagttcgatgatatagaccttttttcaagaggccat
cctgttgaataattatgtcgtccagcagaaaaacaatgataaaaccatgc
ataattattacaatatgcatgatacagacataattattcaacaggacgtc
ctctttgaaaaaaggtctatcaaatCCTCGTATTCTTCCCTcgtttgcaa
aaactttgtcctggcacgcgattgccatttcgacagttcccggacttaac
agcttgacgtttattgtacccggatatttgtctatccggaataaagtctG
TAGCCgctctgttgcgatttcgcggGCGGtcgagtggcggaatactacgc
cccaacaaaccgcctctggcgctaaaaggatacaggaaaggTGTGTAATC
cattatcggaagtaatttcccgacttttattccgaatttggctttgaaaa
gaagctaatatacggtggcggagcagcacaaacttgtcgaacaaaattgg
tttattgaactaatcgaaccgaaacccattgatcgaacttaatcgaacac
tcacaatcttttaaaaaatcttagagttcgattaattgttttaatcgaac
ttttgttCAATGGagttcaattagtttgattgttcgattggttcgacaag
ttcgattgatcgggtctggattcggctaaagcttcagatgcatccggcTG
GACTTTCAAGTTGAATAGTGACCAAAGGGGGTCTCGAACCGGGAACCTAT
AGGTTTCGAAACCAATGCCCTATCCGCTAGGCCAAGCCGGCTGCTGAAAA
TTCGTTATTTGGGGTTACTTACACGAAGGTCTCAGTACTATATATAAATA
AGTCtgactgacgagttaggctaactgttatgatcgcCATTACTCCGAAG
AAGCCACCACACGTGTGCACCGCCAACCGggtagaggaacgaaaaagccg
tggttagatttagttggaaaatatgcaaaacatatgcaagtctacacaaa
gattaaaaagacaacaaagcatcttccAGAccatgtcaatcgaacgaatc
aaatgctgaatcaattgacacgtgcgtttggtttgggaacgcgaaacacg
aacgcgaactacccatgtctatacttttcaatatatctccagaactaaca
gattttttgaaattctgtaaaaaggtctaagttcctgaatagttttacta
tgttctgttaaaaaatcataaccatcagtcaaatactcattcatctattt
aagattgaagacaaaaatttgcgaagaaaaataaaccttgagcacaaaaa
atgcttttttaaacacttttttccaccgaaaaacaaataacttttacaga
cttaccttccccaaacattgaagaagcctctaccaattaaagtaaatgag
ataagataagataaaaccttaaaatcaaccagaatttacaacctttcgtc
caaagcaacaGACGtacttttctcgccgccattttgttttagaatgagaa
ttctagagaattccattcggttCCAGCCCCCACGCTCTTTTTTCAttcaa
tcagatcgcgcgatttcactttcgctttctctagtccaataagattgcgg
gatttgagtcatgtgacatctctattaaaaaacaCGCGCgaattaaaata
gaaatacagggggtcacactactggctacaggaactgaaagcaagcaatt
aaggccaatatgtttggtttttctgaTAGACAAAAGgaataggaagcttt
actgaaagagggataaggctgggacaatctatttaaaagatatggacaaa
aaaaggcacttttttgggtgataattaagattttacttagaaactttaat
tctcttacccccgtctcagcccccccctgatatgagcaagggaacaatgt
tggccacccctactgaaaatttcagatcaaaacaaacaaggaattaattc
ctgtaactcgaagaaaattggaaaaagctggtttttgactgtttctgatc
ctaaagtgctatttttcgGTAAAAGCTAcagcaatttatgtttggatttc
tagaaagcttacccattcattgtcattacattttttatttgaaagagtAA
TCTCTTCATAGAATAAAAATATATcttcaaatcttgtagggtcatttttc
aaaaaaattttgccaaattcgattctcgcatttcgccattttaccctaag
CAAAGGCACGTGTTGAACGCAAttaaatacattcaaataattgcaattcc
attgtcgaacgtaatcgagtcgcaatcgaatattacccagaatatTACGT
TCGATTGAATTCAATTatgtcaaattgacgttatgagggggtggggggtt
ttcaaaagctagttttgacgttgttagagatcaaaggtatacctttttgt
gaaaatcgcaaATATTTGtttaccgtgagaggtcctaaatctgacaccac
tgcctaaatccgatggggtctttcaaagatacaaactaaaataaaaacaa
atctttcgctgtgacgcaacgaagataccaaagtgtcaactaaactgaga
gatttgatACactgaaccaattgaaccaaataacaataattgcttcttat
aacaaaacatattttttattgcaatatgcacaacgtcataaatgacaaca
gcagtaacagcatcataaaaagtaatgagatgttttgattttccaaagca
catgaaaatataaaagaggtctgtgtacgagcgtgctcattttgaaacgt
tacgtaatcaaggcCAAGatcaagcctggtttttattactctacactggc
acttggcttgattgcaggccttccgtaaataaacatctggacttatgggt
ggtaaagagggcgttgatagttgccgcctcattgattcgatgtttgttat
tcaaattaagtgctACCATCCGCCCTTTATTCAACTTCGCGCAATTTTTG
Cagtttagtctgtttgtttcttgatggaaaccagcccaagttgtttcgta
tttttcccgcacaagtcacttttattacaaaactgttatcgttttataca
tgagcaactgatccagaataaaaggtaattatttttacaactcacacttt
ttaattacattaattgacatcttgacattacagctatcttgttagatgtt
ttgtttcgagagttctagcaatagtttatcgttcaacttggagagggaat
gtttgtaaacatagaattttttttcataacagttattgggggggtcggaa
ttaggcagtggtgtcggatttaggacctctcacggtaacTACACTATACT
TTTTAAGCTGTCGAAAATACATTCGTGTATgaattacatgaaaatttgct
gctcgcataatcccattggttcgcGCTATGATGTCATTacaccagacgta
attaatcgaaccaatcgaacggtatttttaatcaaactttgtcgaactta
atcgaactttgttggcCAATTTTAATGCTCGACTAAGTTTTggttgtcga
actttaatcgaatactcacaaatttatcaaaatacaaagttcgattttaa
gtttgattactgaaatcgaacttaatcgaactttgtcaagtttaatggaa
caaaaatttgagaaaacccaAGCAACTGAAGGCTCTGCCAATCATTGTAT
ATtaacttcttttcaaagccaaaatggggtcattcaAAAGATCCATAATT
GATCCATAATTTGAAAATGCGACAGTCTTTTAAAGCCAATTATGAGgggc
aaatttcaaaattttaagggtTAATAGGTGTATAATGATGTAACAAAAAG
GTTTCTGAAAGTTTGTATGATAAAAAACCAAGGCAAGagaaatgatgaat
ttattaTGAAACATTGATTGTCCATGGTACTAAGAAATGGAATATTGCAC
TGGAAAGATTCCTTAGGTACAACAAAGAACTAtttaaggggtcactcaca
tatcgattcttcccacgactaacgtcaaatttaCGCGAAGGGGTGGGGGT
TAGAGTCAGTGACGCTTAGAAATTTCACCATAAGTATTGATTTTTGAGAC
ACTTTTTTCcgtgacaaatgttactttccattttcttttcctcattttat
atatttcaagTATTCGCTCACTTCGCTattttatagaacaattttaacca
aaacaaacggcctgatgtttatgtctcgtgttccttttgtttagacgGTC
TGCACGGCCCGTAAATTTTAGTCGACGGTCggtctttttttgtgaaataa
cgCTATTCTGTTGATTATGATTACAGAGATATAATTAATTCCGGCAACTT
TTCAAATTAGcatcaatttgacgttagtcatgggtagaatcgatatgtga
gtgacccctaactCATTAAAAACTCATTTCTTGTATTATTTGTTCATCCC
CTGCAAGTCAATAAGTGATATCACCAGGGATTTTTCTTGTATTATTGGGG
CAGTCCTGTTGAATCTACTGCCTTTTCCTCATAGAATTATGAAGATGATG
GTCACGACTGGTATTGCTGGGTATGTCATCGAGAAGGTGAAGTTTATTTG
TGTTCGCGTTGCCCTCGTGTGATACATCGGAAATGTGCTGAACTGACACA
AGAAGACTTGGAAGGTGACTTTGTCTGCTATTGTTGTAATGTAAGTatgt
tgtctttttttctatttgaaaattttatgtgaAATAGACTTTGGCAGCTT
GAAAGTGATATGTTTTATTAACCCTGAGAAGAACAATATTAATAATCTGG
GGGGACATCCAAAACGTGtcacaaaatcttcaaaaatgattgaaaagtCA
TGAAAATTGTCTGGATTATTAAAGGCGCTTTAATTTTTAGATTATTTTAG
CTATTACCCATTTTTAGTGCTGGCGTCATTGAATGTGgaattaaaaaagt
ttagaGTAAAAGTTAAAGTAAGGACAGCCTCTAACAAAGCCtctctgaaa
aaaaatcctCCATTTAGAAGGGATAATTTGTTACCATGATTGATAGGATT
ACGTGCTTTTGCTGCATTGAATTACTTTTTTCTCAATGTGCGCTCCCTCA
AATCTAAAAGCATGCATAGAATAATTTCTTTGATAATGGTGTAATATGAT
ATTGCTCACCAACAGCTGACCAATAGCTTAATTTTTTAAACTAACTGGAT
ATCCTATATATTGACCCTTGTTCGTCAGCACGTTTGTCTGTTAATTTGTT
CGTTACCAGTTTTTGTTGGCATCAGACCATGGGAATATTCTGAATTTTGG
CACCTTTACAAATGATagtgcctaaaatgtgacagagcccaattttaaaa
gaaaaaatcggtCGCCAGATTGGGAAAAATGCCACAAAAAGGATGgtttt
aggaattttttaattatgatttgttttgtttgcaGGATTTGGAATCTACA
AAGCAATAtggtaaaaaagaaattcaagaactGGCCACCATGTTATCTTA
TACTATTGACCGAATGAAAAGCAAGGTAATGCTCCTGGAAGACGATTTAG
AATCTTCTAAATactcttttattttgttacctaagtggattaaatttcgc
atgGAATCGCAAAAATTAATACTCGCGAAAGATTTAAAATCTCGATTCCT
GTGTCCTccataatagcgagtttatgtatgtgtgtttttcagcgacggag
acggtaaggttctaatttgacaagatcctgaccagctgaggacgacggta
aatcagcacttttaccgtcctcgattttgcggggcggaattgcgggtttt
tccaaatcgtttcagtcactttaccgtcctcaaaagtgcaaatacataaa
ctcggtaatgatTGATTTCAGCGTTGTGAATGGTTTACCAAGTTTCTTCT
TTGAATCTAGTGACCACAAACACAACAGCATGCATTCTCAAGTGAGTTAC
AGCATGTCCaaggtaaaagtgaaccagtttccactcactttcaaaatgtc
aaacatagctggaaagaagcgccatatgatgtagatcaacgtgatgggtg
aaaaaatttaatttgaggctataagaagttatagcccaaaaacctgtatt
atgacgtcataaacattacgtaacattacgtcaagaaacttaaaatttta
ctCAAGTGAGTTACAGTTGTGGTGCACAATGAATCTACACTCCTCGGTTC
GTCCACTTAATAGATAGGCGAGCTGTCCGGttgtggaccccgtgaaaaat
aatgataaatagCCACATTAACAAGAAAATTTGAACTAAACTTCCATCCA
CTGATTTCATGGAATAAATGCTTAAGTAGATTACCCCTTTAAAAACAGCT
AGGTTTGAGCTCTTGAGTTAATTCCATTGTGTTTTAGTGTGAGGAGCTAT
GGAAAAGTCCAGACGAAGAACTTCATCCAACTTACAGGCTTTTTGTTTAC
CAGGACACAAGTCTCAATGAACTTGAAAAG Coding sequence (CDS) from alignment at sc0000210_pilon:372263..380242+ >XLOC_031519 ID=XLOC_031519|Name=XLOC_031519|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1260bp|location=Sequence derived from alignment at sc0000210_pilon:372263..380242+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAGAGTCTGAAGTGAGAAGAACTTCTGATCCTCGAGTTGTGAGGAA
GATTCATTCTGCAATCaaaaaaaCATGTGAGCAAAAACAATGTCCAATCA
TGGAAAGGATTCAAAGAGCCTTGGCCATTGATAAAGTACAAATCACACGT
TCACGAATAGAGCTTCAACTGAAAAATGCAATCAAAGATGGACTGATCAT
TGAAAGCAGTGGTAAATCAGGCAAAACTACTTCCATTTCTGAATCAAAAT
CTTCATCATTTCGGGTGCCAACTCAAGAAAACTTTTATGAGATGGCAGAG
TCTGAAGTGAGAAGAACTTCTGATCCTCGAGTTGTGAGGAAGATTCATTC
TGCAATCaaaaaaaCATGTGAGCAAAAACAATGTCCAATCATGGAAAGGA
TTCAAAGAGCCTTGGCCATTGATAAAGTACAAATCACACGTTCACGAATA
GAGCTTCAACTGAAAAATGCAATCAAAGATGGACTGATCATTGAAAGCAG
TGGTAAATCAGGCAAAACTACTTCCATTTCTGAATCAAAATCTTCATCAT
TTCGGGTGCCAACTCAAGAAAACTTTTATGAGAATTATGAAGATGATGGT
CACGACTGGTATTGCTGGGTATGTCATCGAGAAGGTGAAGTTTATTTGTG
TTCGCGTTGCCCTCGTGTGATACATCGGAAATGTGCTGAACTGACACAAG
AAGACTTGGAAGGTGACTTTGTCTGCTATTGTTGTAATAATTATGAAGAT
GATGGTCACGACTGGTATTGCTGGGTATGTCATCGAGAAGGTGAAGTTTA
TTTGTGTTCGCGTTGCCCTCGTGTGATACATCGGAAATGTGCTGAACTGA
CACAAGAAGACTTGGAAGGTGACTTTGTCTGCTATTGTTGTAATGATTTG
GAATCTACAAAGCAATAtggtaaaaaagaaattcaagaactGGCCACCAT
GTTATCTTATACTATTGACCGAATGAAAAGCAAGGATTTGGAATCTACAA
AGCAATAtggtaaaaaagaaattcaagaactGGCCACCATGTTATCTTAT
ACTATTGACCGAATGAAAAGCAAGTGTGAGGAGCTATGGAAAAGTCCAGA
CGAAGAACTTCATCCAACTTACAGGCTTTTTGTTTACCAGGACACAAGTC
TCAATGAACTTGAAAAGTGTGAGGAGCTATGGAAAAGTCCAGACGAAGAA
CTTCATCCAACTTACAGGCTTTTTGTTTACCAGGACACAAGTCTCAATGA
ACTTGAAAAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000210_pilon | genome | sc0000210_pilon:372263..380242 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 538-630:7888 |
| Aaloc | 448-537:6936 |
| Aaloc | 292-447:6035 |
| Aaloc | 1-291:1 |
|
