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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000210_pilon:381129..388651+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_031518 ID=XLOC_031518|Name=XLOC_031518|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7523bp|location=Sequence derived from alignment at sc0000210_pilon:381129..388651+ (Clytia hemisphaerica_ch_hm2_pilon)
ggTGAAAACAAATTAACAGAGTTAGCTCGTATGGTTGTTCTTGACGGGCA
AAATGAGGTATAAAGtgtaatttgatttgaaatttcagCCCCTTCTAAAT
GGGTGGCATTTCTGAaacttcaaaagactttttggtCTCTTTTTGGAAAA
GTTTGGAGTGTAATTGAATGTTTTAGAATTCTTTCGAATTTATTTTCCAT
CCTTTACAATCTGAAAGAACATATTAACAAAATTACTTAGCTTGCAACAG
TTTTAACAAGTTCTTTTTCAGTAATCCGATTTCCCAAAGTTTGTAGGAGG
TGATGGAAAGATGGTTCCTATCTCCACTTTAAACTACCACTTCACTTCTT
CTATTTTATTTCATCTTTCAGCTCAGCCAAATCGATATTTGCTCTGAATG
CTATATTCGCTCTAACGACAGAATGAAGAATTGGTTTTCGATCCCATGTG
TGAGTATCATTGTAATTTTTTGCTTTTCTGACCTCGTTCCTGAAGTTGCT
ATTAAAAATCGTGGAACCTTTCgtaattttttcatgtttttttaggCTTC
TTTGCTTTTGGGGCCTACCTaaggaggtcctataaattgaccgttaatgt
taatgtttatATTCTTTCTCAAGTCGAAAAATatgtacaaatctgtacta
tctttaaagctaatagagttcaaCCGTTGTGTGTCCGTTTGTTCGTTCAT
TTGTTCTTTATGAGAACTTTTCAACATTAGCCCgttataaattttcattt
gcaTTCTTTCTTCAAACCTTCATAGTGCGACCTCGTTATATTAACGTAAA
AGTCTTGTCTATCAAGGTTTAACGGTAGGTTCACACTTTCATCACGACTA
ATGTTTTATTTAAAACATCTATTGTTTCGTTAACTTTCTAGATACCAGAA
CACAGAATCGTATATGCAAAACTTGGAACAGATCCACCTTGGCCGGCCAA
GGTATTTCACTACTGAATTCATAAATTGTTCATCTCtgactttttgaaat
aaagtaaattttgacGCTTCTAAAgccgctatctaattcgaaatatatca
aaagtaatacgcaattgaaaatttactgccagctaatttgaaatatattA
GATGATTTATATTCTTCTCGTAGTAGTGTGCGTGAtctaatttttgtcaa
aaccaGGGTTTTTAGACAATGGCCACCACCCtttttttAACCTATGTACT
TGACTACCATTATACTGTTTGTTACTGGacttggtttgccgtcacccgac
tgACTAACTGAATCTCGAAATTGTCGACCCAAAAAgatttattgccattt
taaagaagaatttACCAGATTTGATGACCCTTTGAGGGGCTTCGTATCAT
TTGATATTGTAACTTGATATCAGATTTTTTATTGTAATAAATTCTGTGCA
GGTGTTACGTGAAAACGAAGACGGTTCCAGCATTGACGTTCGATTCTTTG
GAAATCCATATCAAAGGTATTGAGCACACGTTTACTTAGATCTCATCTGT
TCAAATTATTTaaccaaagttttttttttcatctgcTTGCTAAATATAAT
CTTCGCTGTAAAAGCATGTCCTGTTGGAATCTTTATGCCCTAGAAATCCT
TAAAAAATCGAAAGTTTCGAACCATCTATCAGGCCATCCTAGAAAAGCAT
GGTAGTGTTTTTCAActaaaaagactgattttaccAGCATTTTTAGTGAT
TACTGGAGGGTTAGCGTCTAGGGCATATGaaaaaaaaGCCTGTCTTTAGT
GGGCTGCACTGATATCTAAAGGAAGTAAATTAGTCCTGTTTGTTAATCCG
TACGAATTAAAGGAATGATGGTCTAATTAACTTTCTAATTAACACAGAGC
ATGGATACCGAATCGAAAACAAAACATCTGGGATCTCGACGAAAAACCAC
AACCGAAGAAACGTTCTAAAGCTCTCTCGCTTGCCGAAGAAGAACTCAAA
GTCTACTTACGTCTATTAGCCAGGAGCAAGTCCTCTGCTAAGGTATATTG
ATCACGTATAGGCtatttcacggtcgaaatggatcatgggtaatcaggac
caccgcGCTCCGATAGCTACTTTCTGTTggtctaattttttggatgtttt
tgcgtctagccagcGGGAAACCGTTATTGAGGCGCAACCGGTCCTGATCA
CACATGATTCATTTCAACTGTAGTGAGATGGCCTATTCTTAAATATTCAT
CATCCAATTCCAATCAAACGTctgtaacctaaaaaaaaaaacagggaaaa
tataaagaaatgaaaattttgcttttgaagGATTGACTTCGACATCAGTC
TTTGCATTCCCgacacaaaaaaatctttctcctactttttatgatttttc
cttcttttcaaGTATTCTTCAAACATCTCCTGTGCTTTAATATCTTTGAT
GAGTTATTACAGATTATACTCTAAAATGAGACATAAAATTGACTATCTAG
TTAGTCTTGGATTAAAAGATATCCAAatgctctaattagcatatttccat
ggtgGGCAAAAGCTGTTTATATGGAGGTGGTCTGGCCCAGCTAGGTGAGG
TGGGatggattttcgaacgtttcgTCACAGTTTTTGACGAATCAAATGGC
TAGAAATAGATTATGTGGCGTTCGAAAATCTATCCCACCTCACCTAACCT
CCATATGAACAGTCCCTTAGAAGAATATAAATCAAATCAACGGAGATACT
GTTTAATACATTCTGATCAATCGTATTTACTTTCCTTTCTAAAGAGCGGT
AAAGTAACATCCTCGGATTcatctgaagaagaagaaatcgaCGACTCAGA
CGACCAACAACCTGAAAAAGAAACTAAATCATCTTTCACCAAGGTCAAAA
CACCCGCCAAGAAAGCCGCAACACCCGCTTCTGCTTCCAAATCTTCGTCT
CGTGGTCGAAAACGAACGCCCGCCGCCTCCAAACCGCAGACTGAATCTGA
cgaagacgaagaagaagaagaattggcggacgaaagcaaaagcgaaagcg
aaagtgaaagtggcaGCGATGGAGAATTCCAACCGCCACAGAAACgtaac
aaaaagaaagacacCAAACGAAAATCGCGCGACGACTCGCAGTGTAAGAA
ACAACGTGGCCGAAAGCGAGGAAGTGGCGTGAAACGAAAAACAACGTCGC
CCGACGGAGCATCCTCCTCGTCTGCCAAAGAAACGAAAGCCGAGCGACGT
TTCCGCGAGAtgcaagaaaagaaaatgatggaatttcaaaaaaacaaagg
tagcaaaaactataataaaaacgaacagaaagttgatattaataaaaacA
TTGGTAGTGAAGACGGTGGTGATGATTCTTCTGAGATGCAGTTGGCGCAA
CAGATCAAAATGACCGACGACTATaagatgattgaaaaattacaagATCG
CGTTCGAACGATGGAAAAATCGTTAGAGCAAACGAAAGGCGAGTACGAGG
CTGCACAGGCTGACCTTGAGTCCACGCGCATCGACTTGGCGACCGAACGA
CAGAAATGTAAAAGGTTGCAAGAACAAGTGGAAAAGGACGTCGCGATCGG
TGAAGAGAAAATGCGCGCGGAAATGTTGAGTAAGAAACAAGAAGAAATCG
ACCTCGCCATTGAAGAAGAACGGAAGCGAAACGAACTGGAATTTCAGAGT
CGGATGAACGAAGCCATTATGGAAGAACGGTCAAAAGGCGAAAACAAATT
CCAAGAAACTCTTGAAAAAGGTATCTATTTCGcagaaagtattttttcac
caCTTTCCCACTGATGGATCGACCAATGTTtaagtttgaattacagaagT
TTTAGAATAATATAGGTTTATTGGGGAAAAGTTAACTGTAATCCCATCAA
TTTCGTATACTTATGCGGTGATATTTTCTCGGAACTTGTTAAAGCAAACT
AGACGCTACATAATCTCGTAGGCATACGTTGGGAGTTGTTTTGGATTTTA
AGAATTACACATTTTTCAGAATTCGATTTTCTGTGACTTTTGAGATTTTA
TCGAGACTCTTGTGGCCATTGTTTGATggatattttttgagctttcaGAT
CTTCCAATAGATATTTAGGAAGTTTCTGAGAATTTTTATTCTTCTGTTAC
TTTTTTCGCggtaagttttgaaagttttcgaCGTGTTGTTCTGCGTTGTC
CTTATATTTTTGTGTGTTTATTTTTATGGAGATTATTTCAATTCTTGGTC
ATTATGAACTCATTTGTCTTCTAGAACGCGTCAATTCGGAAAACAAAGCC
AAGATGATGTGGCAACGCGAACGCGACGAATTGCAACGAACTTTCGATCG
ATACAAAACCGAATTGGAAGTGAAAAATTCTCGTGGTATGGAAAAACTGA
AACTCGAGTCGGACGAGCTGATGAAGCGAACGCTAGCGGACAACATGAGG
CGTATCCAAGCTGACACTGAACGTATTTTAGCGGCCGCCAAAAAGAAATC
GTGGTGTTCCAATTGCACGAAAGAGGTAAGATTTTCTCCTTTCGCTTCAG
AATGATTTTCAGATTCGTAATTTCCCAGAGATATTGGGAATTGAGAAGTC
TCGATATAATCTCAGTGTGGGCATGTTTCTTGACCAAaaatctaccgggt
gcgccacaaaaaggtATCCAGTctaaaaccaaaaatctgaggaaaatttc
gttaaaagtaaattgaaatgattttgatgaacattttaaaccctttctTT
CCATcaccatcagtttcaaaattcatttgtttaattactgaaaaatgatc
ttaatcatgtaaagcctcttgcgattgccaattttaaaactaaagtttga
taggtcgatttttaacgttttcgggcactttctgaaagtaacttttttat
tcgattgagcttaacttttgatctaatgaatcgaatttaataaatgaacc
atcaaaatttaagtttatttttcttctttctgatggaataggaatggttg
tttcttaattcttagattttgaaaaaatcagtttcaaagagagaaacttt
ttaatggcgcacccggtacaagGTTTTACTCTCAGAATGATGATCGAAAA
GGAACCCTTTTGGATTGAAAAAAGTATTAATAGAGAATTGATTAGACTGA
TTAGAAAAATACTTTACTCCCAAAAATGTTACCAACTTAATTTTTATGGA
CACCCGCTATCAAAATCTAGAAGGATTCTTTTATAGTTGTCAACTTTTTT
ACACCTGACCTCAATTTATGATATGCGTGAGTCTTTTTTCTAtaacggaa
acacccgaaaaaagccgggatttaaGTACCTAAAAAGCgatgaagcccga
ttttcgaaaaaaaattcgcaCACCAGATACGGAGATGTCCCGGAAAAAGC
GGTTTTagggattttctcgagattttctcattggtttttctgacgttttg
tttATTTGGAATTCAAATTCTTCTGGTGATCagccaggtaggtccataaa
agtatcacttatttctcttttttttttgtcaggCGTTTTATCATTGTTGC
TGGAACACGAATTACTGTTCGACAGATTGCCAGCGTGTTCATTGGGTGTC
ACATCGCTACCAGTGCACGCGTGAGATGATGTCAACGTGCCGTTCGTGtc
aacaacgtcaaaacttcccAGGTGGGTTTCCTTCGCAAGTTCCTCCAAAA
TAATCTCGCCTCTGCTGGTCAccagtttgttttttaagtattaatcctta
aaatgtaCATATCATGGTatataaagaaattaaaaaaggatGGGCCTTGT
TGTAGTAGATCCTCTGTAAATGAATGAATATTGAACGCGCATGAATGAGT
AAATTATTGAATGAATGGATAGAAATATAGATAGAGGTATGGATGAAAGC
ATAAACGAAAGGAATGAATGATGGAATGAATGGATATAAAGAGAATGTTT
GATGTACATTACCTCGATGGAAATTCTTTTTCTCAGAGCTTACTCCGGAG
AGTCACACTTTCTCTTAGAACTGAATGGAGGAAAATTGTATTTTacgcaa
tgttttttttgtttgctatctaaagttgaaggttttatttttacataagt
gttcccgtttcatatcagacccGTATATTATATCAGGACGGTgcctgcct
attgttatattatgctgatataagcaaaaaagtgtttttcttttcctctt
tctgaccaatcttgctccacatccgtatgcaatctaatgtgaaaaagctt
ataaataaaaattgatgagcaagcaaacgatatcactcttatttaaaaac
aaaacctttaatgggctcttccagaaaaaaaattgtatatggggggtgga
ggataaacaattttcagtgatttatcccccggacaaagtgacttttgacc
ccccggacaacgggtttcaccccccggacaacgggtttcaccccccggac
aacgggtttcaccccccggACAAGCGTCAGctgacccccggacagagcaa
aattatcccctggaaaaaaattgacgaatttttactaccccccggacaat
atatcctccacccgggGTGTACGaactttttctggaagagcccaatcctT
TATGTTCTCATCGAatgtttttaagtaaaaatttggaaatcttTCTCTTG
GTTGCACTATTTTGATGCGAATCTCGAACTAAaatgattttcctaaaaaa
atgattaaacaAGAAGTTATGTTTAGGCCAGCGCATGAATATTACTAGAT
TATATATATTTGACTATACAGTAGGTTATGTTATTCCACTATGTAATACT
TTAGGCGTTTAACCttcgcgaacagaaactttcgcgatgcTTTTGAAATT
GTGCGAAAGTTTGTGTAGGTCATACAATACTTGGAAATcgtaattttaaa
atttttagccCTTGTAGCCTTCTTTAAAGTCAATGAATAACTGTTTTGAA
ATTGACTTCAAacagaatttttcataattaagctaattttattttacaat
tttcatttatCCTCAAACTGGCGAAAATTTGTGGTAAAATTCGCAATTTT
CGATTTCTCGCGACAGTTTGTGTTCCCGAAAGTTTATACGCCTTAAGTAT
ATAATCGAGACAAAAGCTGTTTTGTACTAACATACTACTTTCAGAATTTC
TTTTAATTAattatgcccctatttttacatcaatgattgtctatttttcc
cttatttttattatcatttttttttactcCTCCGCAATGCCTTCCAGAAA
TTTTAAAGATTCATGGGTCAGATTTCCAAACGATTTTCTATACAAATGGT
CAGTTCCTCTCCCTATATTTGTAAAGTGTATTTTCAGTCCATTACGTATT
TTTCACTTCATATTAAGACAGACTTAcaattttccaatatttcttgAATG
ATTTTATCCGAGGGCGAATTAGcttttctggtggttgtgggttttagttt
taggtcttatcttttttatatcttaaatttttttatttatacacttttgt
tttcttttttttttaagattttgctgTAAGTTATCAGGAAGCGattgatt
ttttatgtttttacaatgtctaa Coding sequence (CDS) from alignment at sc0000210_pilon:381129..388651+ >XLOC_031518 ID=XLOC_031518|Name=XLOC_031518|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3654bp|location=Sequence derived from alignment at sc0000210_pilon:381129..388651+ (Clytia hemisphaerica_ch_hm2_pilon)
ggTGAAAACAAATTAACAGAGTTAGCTCGTATGGTTGTTCTTGACGGGCA
AAATGAGggTGAAAACAAATTAACAGAGTTAGCTCGTATGGTTGTTCTTG
ACGGGCAAAATGAGCTCAGCCAAATCGATATTTGCTCTGAATGCTATATT
CGCTCTAACGACAGAATGAAGAATTGGTTTTCGATCCCATGTCTCAGCCA
AATCGATATTTGCTCTGAATGCTATATTCGCTCTAACGACAGAATGAAGA
ATTGGTTTTCGATCCCATGTATACCAGAACACAGAATCGTATATGCAAAA
CTTGGAACAGATCCACCTTGGCCGGCCAAGATACCAGAACACAGAATCGT
ATATGCAAAACTTGGAACAGATCCACCTTGGCCGGCCAAGGTGTTACGTG
AAAACGAAGACGGTTCCAGCATTGACGTTCGATTCTTTGGAAATCCATAT
CAAAGGTGTTACGTGAAAACGAAGACGGTTCCAGCATTGACGTTCGATTC
TTTGGAAATCCATATCAAAGAGCATGGATACCGAATCGAAAACAAAACAT
CTGGGATCTCGACGAAAAACCACAACCGAAGAAACGTTCTAAAGCTCTCT
CGCTTGCCGAAGAAGAACTCAAAGTCTACTTACGTCTATTAGCCAGGAGC
AAGTCCTCTGCTAAGAGCATGGATACCGAATCGAAAACAAAACATCTGGG
ATCTCGACGAAAAACCACAACCGAAGAAACGTTCTAAAGCTCTCTCGCTT
GCCGAAGAAGAACTCAAAGTCTACTTACGTCTATTAGCCAGGAGCAAGTC
CTCTGCTAAGAGCGGTAAAGTAACATCCTCGGATTcatctgaagaagaag
aaatcgaCGACTCAGACGACCAACAACCTGAAAAAGAAACTAAATCATCT
TTCACCAAGGTCAAAACACCCGCCAAGAAAGCCGCAACACCCGCTTCTGC
TTCCAAATCTTCGTCTCGTGGTCGAAAACGAACGCCCGCCGCCTCCAAAC
CGCAGACTGAATCTGAcgaagacgaagaagaagaagaattggcggacgaa
agcaaaagcgaaagcgaaagtgaaagtggcaGCGATGGAGAATTCCAACC
GCCACAGAAACgtaacaaaaagaaagacacCAAACGAAAATCGCGCGACG
ACTCGCAGTGTAAGAAACAACGTGGCCGAAAGCGAGGAAGTGGCGTGAAA
CGAAAAACAACGTCGCCCGACGGAGCATCCTCCTCGTCTGCCAAAGAAAC
GAAAGCCGAGCGACGTTTCCGCGAGAtgcaagaaaagaaaatgatggaat
ttcaaaaaaacaaaggtagcaaaaactataataaaaacgaacagaaagtt
gatattaataaaaacATTGGTAGTGAAGACGGTGGTGATGATTCTTCTGA
GATGCAGTTGGCGCAACAGATCAAAATGACCGACGACTATaagatgattg
aaaaattacaagATCGCGTTCGAACGATGGAAAAATCGTTAGAGCAAACG
AAAGGCGAGTACGAGGCTGCACAGGCTGACCTTGAGTCCACGCGCATCGA
CTTGGCGACCGAACGACAGAAATGTAAAAGGTTGCAAGAACAAGTGGAAA
AGGACGTCGCGATCGGTGAAGAGAAAATGCGCGCGGAAATGTTGAGTAAG
AAACAAGAAGAAATCGACCTCGCCATTGAAGAAGAACGGAAGCGAAACGA
ACTGGAATTTCAGAGTCGGATGAACGAAGCCATTATGGAAGAACGGTCAA
AAGGCGAAAACAAATTCCAAGAAACTCTTGAAAAAGAGCGGTAAAGTAAC
ATCCTCGGATTcatctgaagaagaagaaatcgaCGACTCAGACGACCAAC
AACCTGAAAAAGAAACTAAATCATCTTTCACCAAGGTCAAAACACCCGCC
AAGAAAGCCGCAACACCCGCTTCTGCTTCCAAATCTTCGTCTCGTGGTCG
AAAACGAACGCCCGCCGCCTCCAAACCGCAGACTGAATCTGAcgaagacg
aagaagaagaagaattggcggacgaaagcaaaagcgaaagcgaaagtgaa
agtggcaGCGATGGAGAATTCCAACCGCCACAGAAACgtaacaaaaagaa
agacacCAAACGAAAATCGCGCGACGACTCGCAGTGTAAGAAACAACGTG
GCCGAAAGCGAGGAAGTGGCGTGAAACGAAAAACAACGTCGCCCGACGGA
GCATCCTCCTCGTCTGCCAAAGAAACGAAAGCCGAGCGACGTTTCCGCGA
GAtgcaagaaaagaaaatgatggaatttcaaaaaaacaaaggtagcaaaa
actataataaaaacgaacagaaagttgatattaataaaaacATTGGTAGT
GAAGACGGTGGTGATGATTCTTCTGAGATGCAGTTGGCGCAACAGATCAA
AATGACCGACGACTATaagatgattgaaaaattacaagATCGCGTTCGAA
CGATGGAAAAATCGTTAGAGCAAACGAAAGGCGAGTACGAGGCTGCACAG
GCTGACCTTGAGTCCACGCGCATCGACTTGGCGACCGAACGACAGAAATG
TAAAAGGTTGCAAGAACAAGTGGAAAAGGACGTCGCGATCGGTGAAGAGA
AAATGCGCGCGGAAATGTTGAGTAAGAAACAAGAAGAAATCGACCTCGCC
ATTGAAGAAGAACGGAAGCGAAACGAACTGGAATTTCAGAGTCGGATGAA
CGAAGCCATTATGGAAGAACGGTCAAAAGGCGAAAACAAATTCCAAGAAA
CTCTTGAAAAAGAACGCGTCAATTCGGAAAACAAAGCCAAGATGATGTGG
CAACGCGAACGCGACGAATTGCAACGAACTTTCGATCGATACAAAACCGA
ATTGGAAGTGAAAAATTCTCGTGGTATGGAAAAACTGAAACTCGAGTCGG
ACGAGCTGATGAAGCGAACGCTAGCGGACAACATGAGGCGTATCCAAGCT
GACACTGAACGTATTTTAGCGGCCGCCAAAAAGAAATCGTGGTGTTCCAA
TTGCACGAAAGAGAACGCGTCAATTCGGAAAACAAAGCCAAGATGATGTG
GCAACGCGAACGCGACGAATTGCAACGAACTTTCGATCGATACAAAACCG
AATTGGAAGTGAAAAATTCTCGTGGTATGGAAAAACTGAAACTCGAGTCG
GACGAGCTGATGAAGCGAACGCTAGCGGACAACATGAGGCGTATCCAAGC
TGACACTGAACGTATTTTAGCGGCCGCCAAAAAGAAATCGTGGTGTTCCA
ATTGCACGAAAGAGgCGTTTTATCATTGTTGCTGGAACACGAATTACTGT
TCGACAGATTGCCAGCGTGTTCATTGGGTGTCACATCGCTACCAGTGCAC
GCGTGAGATGATGTCAACGTGCCGTTCGTGtcaacaacgtcaaaacttcc
cAGgCGTTTTATCATTGTTGCTGGAACACGAATTACTGTTCGACAGATTG
CCAGCGTGTTCATTGGGTGTCACATCGCTACCAGTGCACGCGTGAGATGA
TGTCAACGTGCCGTTCGTGtcaacaacgtcaaaacttcccAGattttgct
gTAAGTTATCAGGAAGCGattgattttttatgtttttacaatgtctaaat
tttgctgTAAGTTATCAGGAAGCGattgattttttatgtttttacaatgt
ctaa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000210_pilon | genome | sc0000210_pilon:381129..388651 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1774-1827:7470 |
| Aaloc | 1633-1770:5483 |
| Aaloc | 1384-1632:4227 |
| Aaloc | 406-1380:2745 |
| Aaloc | 262-405:1849 |
| Aaloc | 196-258:1402 |
| Aaloc | 136-195:892 |
| Aaloc | 58-135:372 |
| Aaloc | 1-57:1 |
|
