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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000260_pilon:91270..94246+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_031182 ID=XLOC_031182|Name=XLOC_031182|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2977bp|location=Sequence derived from alignment at sc0000260_pilon:91270..94246+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACAAGCTTTGCCAACAATGATGGTGGTTTCAGCTCTCAAAATGCTTG
GGATGATTTGCCTCCTGAATCCTTGAGAACTGGATTTGGAAATACTCAAA
ATAACAAACGAAGAAAATTAGATTTCAATGTCTCAGCTAATCAAAGTTAT
GGCAATAATAGTAAGTAAGAGATTCAGTCATAGTATTAAATTCCTTTTGG
ACCCTCTAGTATGGACAAATTATTGTAGTTTGTTAGTTTAAATTGCTTTC
TTTGGTTTGTACAGCTGTGGgtgtaaaaatcagaaaaaggttACAACGTA
AATCTTactcatggtttcagcccacttttcaggtgcccttattgagcatg
gtgcccccagcaatttaggtccccttgaaaaattgctttgagttaggtac
ccctattcagcagataatttctttgaattgacactttttgttcttttgtc
attcctaaaatcatgctcatgcatgaacgcctgctaataagctttcttgt
tatgctataaagatggcggctgtaaatcaaaacaatcacattagaaaaat
atagcaaaagatggcgtgatgggaaacgaaagaaaaattggatgggaaac
taggtgctggggtaaaaaattcaataatttgaaatattttgaaatattag
atttggaaaatataaccagcccccacagcctccatcaagacagctaggta
cccttaatgaataggtaaccccaaagaattgcaaggcattagccccctct
actaacctggcctaggtgcccttcagatttctgggggggggggctgatac
CATGTTACTAGTATTCTGGGTTAGACCATCTAATAGGTAAGAATAGcttt
taattttcagctttttataTTTAGCTTTTCTCAACAAGACTGTACCTCCT
GAGACACCTGCTAACCTTCAACTGCAAGGTAATCCTTTTTTATTAATTAT
CTTTACCAAATGCGACTTTCAGTCTGAGAtaattcattttgttttgtgag
aaCTTACTATAACAACTTTTGTCGCTTCTATTTGTAAAAAGCATAGAAGA
AATTGCAAACATGAGCTCTATGTCTAACTGTATGAATTAGATTGTTTTgg
tagaggtcaatagacctgcgaaatacaCATctataaattattattattat
aattataataaatatGATAACAACACATTTCccataaaaaaggaaaatgg
aaTTTGATTAAAGACTCAAGTACCCTAAGACATGAAAATTGATCACCAAA
CCACATCTGACTGTCAAATTACTTGTGGGAACTGAAACAATTAGGTCTTG
CGCAATCAATCGTCTCATAGGAAATTATTGACCATTAAATCACATTGAGA
TGGCGTGAAACAGTgtgttcatgatatgcaccactgcaatgacttcacaa
aattatgcaatttttctgtttttgtacGATACGTcacttttctattgttt
aagtgacgtattgggtggaaaatgttaaaagttctcagaagactctccag
tggttcatatcatgaatagtaatgtttttaaattttgaagaaaataagtg
aaacattctttttttagtcggcaatgatgatgatggatCTCATAATCTGA
AATCAATACATGAAATTCGTATCTTTTCAACCTTCaattgaattttatat
tttttaagaagTCCCCTTGTTTGATTTTGAATGTGCAAGGTATTGACAAt
attaaagagaaaaattcaaaatgcaaaAGCTAATAATTCTAcgtttttag
agggaatttgcTAATATCTTAGTCTTAAATCAGTTCATATTCTAGACAGA
CAAAGATAAAGAAACATACTATAGcgacaataaaagagatttttgataGG
TTTTCTCCacaaaaaggctgtttttaccacaATTTTAGTTATTTCAAGAG
CgtaaaaaaagtatgaaaatttttctaaaattggaTTTAATTTAAGTCCA
AATTTTCGGAAATCATGACTTGGTAATTTGGTTTGTTGTAACCCTAAAGA
TTTCTGAAATATCTTTCCTTGAAGTTATCCCTAGGAGTAAAAGGATTTAT
AATGTATTCCTATATGGTATGGCGATGTAGGGTCCGGCTTAATGGTTCAA
ATCCTGTATACTCAGATAAATCTACTATTTCAGTACATTGTTAAACCATA
TCTCAAAAGTTTCAGCAGTTTTCATATTTTCTTTAATTTCTTTATGGTTA
AAGCTGAAAAATACAGGCCAATTTTTCCATTTGCATACTTCAATGCGTTG
CAGTCTAAAGTTTTCGATGAGGTAATCATACATTTATTTTGAAGTGCATG
GAGATTGCTCAAACGTCAGAAGTACTTTCAGAACTTTATGTTGCATTACT
CTATTAGAAGGAGTAGAGGCTGCTCTATATGGCTGACTTGGACGTAATTT
AAAATATCAGactaatttgaaaatcattctTACCAGTAAAGCtttttctc
atttacctcatttttgtttcattttcactaattttaaagattatgtttta
tcaacaaattgttttttaagGTGATGTATTCAGATAATCCAATGGTCATT
TGTGCACCTACTGGTTCAGGCAAAACTGCCATATTTGAGATGAGCATTAT
ACGATTGCTTCTCAGTACTACAAATTTCACCTACAAAATAGTATACTGTA
CGTTGATTTTTCTTGCAGCCTTCTTGACAATATTAAGTTTTCTTTATTCT
GAGTCGTCGAATTcactttctttataagaacagaatatTAGAAagtaaga
cttcgatggccgaaaCATTAGCATAATATTTACAAAGAATTCACGtcttt
ggccaaaatattaagaacaagctaagaacatttttaaggctttggaaaTG
ACATAAATACTCATTGAATGGCaaacatttaagaacatttttaggcttaa
aaaaatagatgttcttataaaaagaaacggTATGTTACCAATATTTTTCA
GTGGCACCAATTAAAGCATTATGTAGT Coding sequence (CDS) from alignment at sc0000260_pilon:91270..94246+ >XLOC_031182 ID=XLOC_031182|Name=XLOC_031182|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=972bp|location=Sequence derived from alignment at sc0000260_pilon:91270..94246+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACAAGCTTTGCCAACAATGATGGTGGTTTCAGCTCTCAAAATGCTTG
GGATGATTTGCCTCCTGAATCCTTGAGAACTGGATTTGGAAATACTCAAA
ATAACAAACGAAGAAAATTAGATTTCAATGTCTCAGCTAATCAAAGTTAT
GGCAATAATAATGACAAGCTTTGCCAACAATGATGGTGGTTTCAGCTCTC
AAAATGCTTGGGATGATTTGCCTCCTGAATCCTTGAGAACTGGATTTGGA
AATACTCAAAATAACAAACGAAGAAAATTAGATTTCAATGTCTCAGCTAA
TCAAAGTTATGGCAATAATACTTTTCTCAACAAGACTGTACCTCCTGAGA
CACCTGCTAACCTTCAACTGCAAGCTTTTCTCAACAAGACTGTACCTCCT
GAGACACCTGCTAACCTTCAACTGCAAGtcggcaatgatgatgatggatC
TCATAATCTGAAATCAATACATGAAATTCtcggcaatgatgatgatggat
CTCATAATCTGAAATCAATACATGAAATTCCTGAAAAATACAGGCCAATT
TTTCCATTTGCATACTTCAATGCGTTGCAGTCTAAAGTTTTCGATGAGCT
GAAAAATACAGGCCAATTTTTCCATTTGCATACTTCAATGCGTTGCAGTC
TAAAGTTTTCGATGAGGTGATGTATTCAGATAATCCAATGGTCATTTGTG
CACCTACTGGTTCAGGCAAAACTGCCATATTTGAGATGAGCATTATACGA
TTGCTTCTCAGTACTACAAATTTCACCTACAAAATAGTATACTGTGATGT
ATTCAGATAATCCAATGGTCATTTGTGCACCTACTGGTTCAGGCAAAACT
GCCATATTTGAGATGAGCATTATACGATTGCTTCTCAGTACTACAAATTT
CACCTACAAAATAGTATACTTGGCACCAATTAAAGCATTATGTAGTTGGC
ACCAATTAAAGCATTATGTAGT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000260_pilon | genome | sc0000260_pilon:91270..94246 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 463-486:2954 |
| Aaloc | 334-459:2521 |
| Aaloc | 268-333:2206 |
| Aaloc | 217-264:1570 |
| Aaloc | 163-213:877 |
| Aaloc | 1-159:1 |
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