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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000329_pilon:328777..333682+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_030971 ID=XLOC_030971|Name=XLOC_030971|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4906bp|location=Sequence derived from alignment at sc0000329_pilon:328777..333682+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACAACTGTACATCTAATGAACGGACACCATCACCTTTTGAATGGAAA
CATGAATGCTATGAATGGACATTTAGCAATGAACGGTTATGCAAACCATG
CTCAAATGGAGCCTCCAAAGCCTGCCGAACTCGTTGAAGTCGAGCCTTTC
GATGAAGACAACGCTACAAATCTTATCATCAATTATCTCCCTCAGGTATT
TTTTCTTCCATTCCATTTTCCGCTAGtttttttGAGTATGTTTCGATGCT
TTTTCAAAGTAGATCTTAACACACAATATTCGGTTTTTCGAGGCAATATT
TTTAAGTCTTTTAACGAGTGAATATCAGTAGTTCTTGGCTCTTCGTactt
aaagtttaattttttatctcttcttTTTCCTTAAGGAAATGACCGAGGAA
GAACTTCGAACTTTGTTTTCATCCGTTGGACCCTTGGAATCATGCAAACT
CATTCGTGATAAGGTATAAACCTCCAttctattttgttgtttttctgtct
gttttgcatgtttctctctttacacatgtatttcgtgttttttttggttt
tgttgaaAATTAATCTGCAAGGTCGACCTTTTCTTATAATCTAAAGTCTC
AAGACAAGACAATTATAACATCGTAGTGATACTATaattctttcaaaaca
aaaaagcgaGAACTTCTTTAACAAGCGTCACATGGGAAATCCGCGattca
ttcataaaaaatcGTAATTTTTCAAGAGTTTCCTTTGAAAAcataaagtt
gtaaaaaaagTTAGAGAAACAGTAAGTTTTGTGTAATTTATGTCTGTTTG
TTTGATCGCTATTAAAAATGCAtcactttaaaaagtttaaagagacagaa
agaaaaagtttcgtCTTGCCGAAAATGTTTGGGCATGCttttttctctat
ttgtttttttccgCCATTTTGGGTTCCTGCccacaaaaagattcgaaaga
agccattgtaatgaaaattcttttcaagatgaaaaaaaattctctctcgC
GCCATCcgcttttcttttgaaagaattttttttcgtttctatTCTTTTGA
AGGGTAAATTTGATTTACGAGGTTTTGGCTTTtgtctcaatttttttctg
ttttattcaATTCGGTGATGGAATTAATTACACtgacaaattttctttaa
aaagaaggaacattaaatttataatttcctCTGACGTAAAGCCAATAGAG
AAAGTGTTTTTTGAAACGTTTCTGTCGCATTTCCTTTAGTGTCTCCTTCT
TTGAGACAATTTGAACTGTTGAttggctgaaaatgatttgcCAAAAAGGC
AATTTCTTTTTATGCCTTACTTGACAAATTAGAAGAATTTTACACTTTGG
GGTTTCCCTTGGCATCTGGCATGTATTGtccaatttagatttttgaaacG
CCAAAGTGAGACTAAAAGTACTCTAAATAATAATTCTTTATAGTTGTCTT
TTTTGTCAGCCATTTAGGAAGAAAGGGAAGGCTAAGAGATACTCTTCATT
TTAATGAGAAAAACCTCATTATTAAAAGCCCACACAGCAAAAGCAACCTT
TGATGCCAAAACACTAGAAACTTTTTGAGGAGAACTTTTTTCTACATgac
agggaaaatttttaatGGCACGATGACTGATTTAGTATATTTGCTTTTCC
ATTCAGATTAAACTGAGTGTCaacagtttgttttgattgaaccaaaataa
aaactttaagtGAATGAAAGGAAAGAATACCTCACTCAAAACAAACCCTT
GAGCAATCCCActtcaaaaagtttatttttttaagaagccTACATCCAGA
CAGCTTTTATAAATACAAACtaaaaagaagtttatcaatTATTCTCACTT
GAGgggatttgaaagttttgacaaGATGATTTCTGAttggataaaaattt
gatgacTTAATCTGGAAAGGTATTTCTGAAATAAGAAGCAATAACAACTT
ACAGCATACAAtgtttctataagaacaaactatataagaacaagagGCTT
CAATGGCCACAAGATTGGAAACAAAAGTTACTCAATTCGTAAAAATAAGC
ATattgaaaagtaaattttcatgcttttaactcaaaaagttaaatacaTT
CAGAGGCCTCGAAGATTTtggatgtgcttataaaaatttattgtaaaggA
TGGCGGGTTATAGAGtaatattttaaggcttattCAGGTTATTTGAGTGA
TCACtaaaaaattttattccaaAGAAGAGATTTTTAACCCATCACATTGA
AGCTTCTTAAAAACTTCATATTCGCCAGACGTGGTGACATCgatctttct
atttttctttgtaatgtGTTTGAGAATCATAACTTGACACCTCCATGTCT
GTCAGCAAGAAATGCTTGTTGTCAAAAatctaatgatgtttttttgtCTT
GTGTTACTCTTATCCTTTTTATACGAATTTGTTACAATTTTGTTCTCCTC
TCCGTTTAGAAATGCCAGCTCTAAACActtaatctcaaaattttttgagg
ATCTTGAAAATACTTtattcgaaaatacaaaataacgATAGacaattata
cattttttgtaagaaaaatctCTGAAGCTTGGGGACGTCctcaacttttt
tagttttaagcctcaaaatattcttaattttactCTTTCGTGAGTGTTTT
TGTGCAATATACCATAAAATTGGGTCTTTAAAATCCTCAAAgctttcaaa
tgttcttaacatgttcttaatattttggcgtTAGAAGccttttattctta
taaattttgttcttataaaaaaggtgcaTCCATAAAAAATGATACCACTT
TTGACCTTTTTAGTGAAACGACTTTTTAATCTGAGAGTAACGATTACTTT
ATCTCGACTTCTAATCtttttttGCTATGTCACACTTCAAACGCTTACTC
TTCAAATCGTGTCTTTAAGCTGAGAAAATGTCATCGGGAGCTAGTGAAAG
TCTGAAGGCTTGAGTGAGGCTTTCTTTTAATCCCGATTGTCTTTActgtg
agattttttttctgtggATAGAAAATGTAAGGGCTCAGAATGAATTTCTC
ATACAGTCTTGAGCCTGGTTTAAGATTTGATCTGAAACTTTAACAGAATG
AACAGTTATTTTCACAACATTCGAGAAGGAATTAACcctaaaattttcga
aaaatagtacaatggagtctctttagctcgaacctctacaactcgacaAT
TTGTTCCCCGTGGGTGTTGGAGTTATGGAGACACCACTGAATCTTACACA
ACTTGTTGTTGTAGTATCATTTTCTAATCAcacaaaataaattgaaatta
ttcaaAAGATATTTATCTCAATAGTCATGTGTTGTTAATTGGTCAGTCAT
TTTCGACCACGagttcaatttcttttaattaCTGAAACAATTTGATACCT
ATTTGCTTTCCTAATGAGTACCTTCCAACCCTCATAATTAACagacaaaa
tttttgttttgatttcataaGCAACTTTTTGATGACAGTGAAAATGCTAA
CGACGAGTTTTCATTTTGTCACAGCTTGGCTTTGCTTTCCATATCAAAAC
ATCACAATccctatacacgtttttttacaagaacatccacaatctttgaa
gccttcagatgttcttaaaccttttcagatttaagcctaaaaatgttctt
aacttgttcttaatattttagttaTCGgagcttatgttcttatatagttt
gttcttactatattttatgttttcttatgtttttattCCCTGTCTCGTTG
GATTATTCTGCTAATAACAAATGTAGAAAGGATGTTAGATTAGAAGGGTC
TTTCTTGGTAGCGATAACTCTTTTTACGGTCACAAGCCTGTTCTATTCTA
CCTTTCTTTCTATCTTGCCTTTAAATGAGATTTTCATATCAAGTTCTCGC
CATGTTTTTCGGTTTTTACTTTGTTTCGAATTTCCCTCGTGCAAGACATC
GAAAATAATTCCCCATTTGCCCATTCTTTCATCAGGTCACACGTGCTTCC
CTCGGTTACGCATTCGTCAAATATGAACTTCCCAATGACGCCAAAAAAGC
CATGGAATCTCTTCAAGGGATGAAACTAACCAATAAAACTATCAAAGTTT
CGATCGCGCGGCCATCGTCCAACGAGATCAAGAACGCCAATTTGTACGTC
AGTGGTTTACCTCTCACTTGTAGCGAACAAGAATTACGCGTCCTATTCGC
TCGCTATGGAGCCATCATCACGGCAAAAGTTCTGTACGAAGAAAATGGCC
AATCACGTGGTGTAGGGTTTGTTCGATTTGATAAACGTATTGATGCGGAA
GCAGCCATTTCCGGCCTCAATAACCGTATTCCTGAGATGAATGGTGCGGT
CAAACCACTCACAGTGAAGTTCGCTAACCCTCCTTCACAAAAGATTCAAC
CCTACCTCGATATCTTGGCACAAGCTAAAGGGCTGGCTGGATCCGCCCTT
CTTAGACAAGCAGTTGGTCTCTCTCAACTCTCTCCCATGGCAGCTACCTC
GACCGCTGCGGCAGCTTCACTAGGAACCTCTCCGCTCGCTTCACCCCTGT
CTCCTAACTCGTCGATCTTGCGTGGAAACTTAGCTATCAGTCCGTCCAAC
TCGGTGACCGCTTTGAATGGCATCCAAACATCTTCATGGTGTGTGTTTGT
TTACAATCTGCCGTCAGACGCCAATGATCTTACCTTATTCCAGCTCTTCT
CCAAATACGGAGCGATTTTGTCCACTCGCGTTGTCTACGATGATAACACT
AAGAAATGCAAAGGATTCGGCTTTGTCAATATGGCTCATTACGAAGACGC
AACGATGTCAATCTTACATTTGAATGGTTACTGTTTGGAGCGTGGAAAGC
CTCTTCAAGTTTCCTTCAAACGCCCAAAATCTCAACAAAATATGCCTGTG
GCGTAA Coding sequence (CDS) from alignment at sc0000329_pilon:328777..333682+ >XLOC_030971 ID=XLOC_030971|Name=XLOC_030971|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2388bp|location=Sequence derived from alignment at sc0000329_pilon:328777..333682+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACAACTGTACATCTAATGAACGGACACCATCACCTTTTGAATGGAAA
CATGAATGCTATGAATGGACATTTAGCAATGAACGGTTATGCAAACCATG
CTCAAATGGAGCCTCCAAAGCCTGCCGAACTCGTTGAAGTCGAGCCTTTC
GATGAAGACAACGCTACAAATCTTATCATCAATTATCTCCCTCAGATGAC
AACTGTACATCTAATGAACGGACACCATCACCTTTTGAATGGAAACATGA
ATGCTATGAATGGACATTTAGCAATGAACGGTTATGCAAACCATGCTCAA
ATGGAGCCTCCAAAGCCTGCCGAACTCGTTGAAGTCGAGCCTTTCGATGA
AGACAACGCTACAAATCTTATCATCAATTATCTCCCTCAGGAAATGACCG
AGGAAGAACTTCGAACTTTGTTTTCATCCGTTGGACCCTTGGAATCATGC
AAACTCATTCGTGATAAGGAAATGACCGAGGAAGAACTTCGAACTTTGTT
TTCATCCGTTGGACCCTTGGAATCATGCAAACTCATTCGTGATAAGGTCA
CACGTGCTTCCCTCGGTTACGCATTCGTCAAATATGAACTTCCCAATGAC
GCCAAAAAAGCCATGGAATCTCTTCAAGGGATGAAACTAACCAATAAAAC
TATCAAAGTTTCGATCGCGCGGCCATCGTCCAACGAGATCAAGAACGCCA
ATTTGTACGTCAGTGGTTTACCTCTCACTTGTAGCGAACAAGAATTACGC
GTCCTATTCGCTCGCTATGGAGCCATCATCACGGCAAAAGTTCTGTACGA
AGAAAATGGCCAATCACGTGGTGTAGGGTTTGTTCGATTTGATAAACGTA
TTGATGCGGAAGCAGCCATTTCCGGCCTCAATAACCGTATTCCTGAGATG
AATGGTGCGGTCAAACCACTCACAGTGAAGTTCGCTAACCCTCCTTCACA
AAAGATTCAACCCTACCTCGATATCTTGGCACAAGCTAAAGGGCTGGCTG
GATCCGCCCTTCTTAGACAAGCAGTTGGTCTCTCTCAACTCTCTCCCATG
GCAGCTACCTCGACCGCTGCGGCAGCTTCACTAGGAACCTCTCCGCTCGC
TTCACCCCTGTCTCCTAACTCGTCGATCTTGCGTGGAAACTTAGCTATCA
GTCCGTCCAACTCGGTGACCGCTTTGAATGGCATCCAAACATCTTCATGG
TGTGTGTTTGTTTACAATCTGCCGTCAGACGCCAATGATCTTACCTTATT
CCAGCTCTTCTCCAAATACGGAGCGATTTTGTCCACTCGCGTTGTCTACG
ATGATAACACTAAGAAATGCAAAGGATTCGGCTTTGTCAATATGGCTCAT
TACGAAGACGCAACGATGTCAATCTTACATTTGAATGGTTACTGTTTGGA
GCGTGGAAAGCCTCTTCAAGTTTCCTTCAAACGCCCAAAATCTCAACAAA
ATATGCCTGTGGCGTAAGTCACACGTGCTTCCCTCGGTTACGCATTCGTC
AAATATGAACTTCCCAATGACGCCAAAAAAGCCATGGAATCTCTTCAAGG
GATGAAACTAACCAATAAAACTATCAAAGTTTCGATCGCGCGGCCATCGT
CCAACGAGATCAAGAACGCCAATTTGTACGTCAGTGGTTTACCTCTCACT
TGTAGCGAACAAGAATTACGCGTCCTATTCGCTCGCTATGGAGCCATCAT
CACGGCAAAAGTTCTGTACGAAGAAAATGGCCAATCACGTGGTGTAGGGT
TTGTTCGATTTGATAAACGTATTGATGCGGAAGCAGCCATTTCCGGCCTC
AATAACCGTATTCCTGAGATGAATGGTGCGGTCAAACCACTCACAGTGAA
GTTCGCTAACCCTCCTTCACAAAAGATTCAACCCTACCTCGATATCTTGG
CACAAGCTAAAGGGCTGGCTGGATCCGCCCTTCTTAGACAAGCAGTTGGT
CTCTCTCAACTCTCTCCCATGGCAGCTACCTCGACCGCTGCGGCAGCTTC
ACTAGGAACCTCTCCGCTCGCTTCACCCCTGTCTCCTAACTCGTCGATCT
TGCGTGGAAACTTAGCTATCAGTCCGTCCAACTCGGTGACCGCTTTGAAT
GGCATCCAAACATCTTCATGGTGTGTGTTTGTTTACAATCTGCCGTCAGA
CGCCAATGATCTTACCTTATTCCAGCTCTTCTCCAAATACGGAGCGATTT
TGTCCACTCGCGTTGTCTACGATGATAACACTAAGAAATGCAAAGGATTC
GGCTTTGTCAATATGGCTCATTACGAAGACGCAACGATGTCAATCTTACA
TTTGAATGGTTACTGTTTGGAGCGTGGAAAGCCTCTTCAAGTTTCCTTCA
AACGCCCAAAATCTCAACAAAATATGCCTGTGGCGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000329_pilon | genome | sc0000329_pilon:328777..333682 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 274-1194:3986 |
| Aaloc | 196-273:386 |
| Aaloc | 1-195:1 |
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