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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000370_pilon:163446..165794- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_030506 ID=XLOC_030506|Name=XLOC_030506|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2349bp|location=Sequence derived from alignment at sc0000370_pilon:163446..165794- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACGACGGATGACAATAACGTGTATCAAGTCATTGGTAACTACGAAGT
AGTAGACACTGGAAAGAATGAATATCTAGTCGCTTCAAAAGGAGATATTA
TTATAGACTGTGAACGTGTTGATGATAATTGGTTCCGTGGCAAAAATATT
CGATCTGGAACTTACGGTTTAATACCAACAGCCAACGTTGTTTCTGTACA
ACAAAACGAATATCGCGAAATTGAACCTGAATTGGTGGAGAAATTACACG
AAGAAGGTGTTGCTCTGACGACCGATGACGTAGACACGACACTAGATGAT
GCAGAGGATAGACAACTTTTGAAGAAAGATCAAAACCCATCGTCAACGAC
TTCTCGATTAGCGCGATTAGGTGAAGGGAATTACGTGGATATGTCTTCCG
AAGAAACATTGAACTGTATTGATGAAGAGGATGAGGAGACCAACAATGAT
GAAAAAATCCCCCTTCCCAAACGAAGTCCACTCCCTAAACCACCTCGACA
TCCTTCAGTATCTGAAACCTCAAAAGCCAACGACGAAGGATACAATTCAG
CTAGTCATTACAGTGGTGAAAACAACGATAGTAAGGCACCTCTTTTGAAT
GATAACAACAGAACCAACACAATCCCTTACGAAGATGAAGCAGGTTATGA
AGTACCAAAGATTAATCCTTCGCATGAGCTAGAAAACGATGTAGCGCCAC
CGCAGAAAATAAAACAACGTAAAAAGAAGAAATCTCTCATGATGCTTTGG
AAAGGAAAACATGGCGAACCTGAAGCCAAAGTACAAACTGCACCTGATGA
AGCACATCAAAACTATTATGATCCTCCGGCTGATATCAGAGACAATTATT
TCCTACCCTACTCCAAAAACCCGACAGTTCGAGTCGCTTTGAGTTTTATC
GCAGCTCTTGGAATATCCGTCACGTTGTTTTTAGTGTTACTGCTATTAAC
GAAACTACATCCCGTGTTATGTTTCAGTGTGGCTACTGTTATTTTCATCG
TGCTTCTCGTGGTACCAGTCACGTTATACCATCGTGGTATATTTTGTGTT
ATCATGCTTTTATTTCCAAGCTTGTTTGGTTATCGTTGTAAGATCGTCGC
TTTCATGTTGTTGATCGTATTCTTAATCCTGGGTCCAGTTTTCGGTACAG
CTGATAAAATTCACATAGCTCGCTCATGTGCGAACAATGAGGATTTTTTC
TATAATTCCACTGTGGTTTCTGGTACATTACAGGACGACTGTATGTATAA
GTTCGGTAGAATTGCTGATACTTGCTCAGGATTATTCAATGATTTCAATC
GCTCATGTCGCACCTGGTCTACTCCTAAAGATGGCTACGAACAATTTCTA
TGCAATCAAACCAAAGATTTCTTCTGTCAAACTAAAAAGCAAGCTGAATC
TATTTGTGCTTCGACCATCATAATGACAAACACTTACAATGAGAAGTTGG
AAGTCACTTACACATTTAAAAACATTGTATTTTACCTGCTGCCTTTCTTG
GCATTAATGGTTCTCGCTGAAGCTTACAATTATAACAAAGTGTACCTGAC
CACGAAAAACAAAGACAATATTTACATCACACAACGCTTGCGTGAGCTTG
ATACCGAACGCCGTAACCGTGGTCTCACTGACTTAATTTTACCTTTAACC
CGTATCGAACTTTACACATATCTAGTTCGAGGAAATGTGAACACAACTAA
AGCTGAACGAAATCGTATTTACAAATGGTTGGTGTATTTGTTAGTAATGG
TTTTTATCACTGTCTGTCTCGTTCTGATCGAGAACCATGTCGATATCCTT
CTAACAGCCGTGTTAACGAAGAAATGTCTTGCTCATTACGAGCAGAATAA
TCATTATCGCTATAGAGTTGTCATTTACGCTCTTCTTGGTACAACGCTTT
TCATCATTTTAATGCAAAGTCATGTTTTACGGTTACGAAGTGTTGTTTGC
GATTACATTTATCCTGAAATGGTTGAAACACGTTCCAAACATTTATATTA
TAAAATTCTTCACGATAGACACGCATTTGCGAGACACGTTCGTCGTAAAA
TTCAATTGCTATCTGAAGAGAAGAGGTTACGACTTCGCATTTCATTTTTT
TCGAAAATTTACAACGTTTTGCCGACCAGATTACAATGGGTTTGTGATAA
ATTTACTGTCAGGACTTGCATGATTTGTGATTCTTTATCGTACCGTAAAA
CTGTCGAATGTAACGAGAATTCATGCCGTGCGCATTATTGTTTTGAATGT
CACGTCGATGCTGGTCAAAATTGTTTGACGTGCAAAGTACCTGCACCCAC
ATCGAGAAACAGTACAGTACCTGCCCCTAGGTCAAGTTTTTGTGTGTAA Coding sequence (CDS) from alignment at sc0000370_pilon:163446..165794- >XLOC_030506 ID=XLOC_030506|Name=XLOC_030506|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4698bp|location=Sequence derived from alignment at sc0000370_pilon:163446..165794- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACGACGGATGACAATAACGTGTATCAAGTCATTGGTAACTACGAAGT
AGTAGACACTGGAAAGAATGAATATCTAGTCGCTTCAAAAGGAGATATTA
TTATAGACTGTGAACGTGTTGATGATAATTGGTTCCGTGGCAAAAATATT
CGATCTGGAACTTACGGTTTAATACCAACAGCCAACGTTGTTTCTGTACA
ACAAAACGAATATCGCGAAATTGAACCTGAATTGGTGGAGAAATTACACG
AAGAAGGTGTTGCTCTGACGACCGATGACGTAGACACGACACTAGATGAT
GCAGAGGATAGACAACTTTTGAAGAAAGATCAAAACCCATCGTCAACGAC
TTCTCGATTAGCGCGATTAGGTGAAGGGAATTACGTGGATATGTCTTCCG
AAGAAACATTGAACTGTATTGATGAAGAGGATGAGGAGACCAACAATGAT
GAAAAAATCCCCCTTCCCAAACGAAGTCCACTCCCTAAACCACCTCGACA
TCCTTCAGTATCTGAAACCTCAAAAGCCAACGACGAAGGATACAATTCAG
CTAGTCATTACAGTGGTGAAAACAACGATAGTAAGGCACCTCTTTTGAAT
GATAACAACAGAACCAACACAATCCCTTACGAAGATGAAGCAGGTTATGA
AGTACCAAAGATTAATCCTTCGCATGAGCTAGAAAACGATGTAGCGCCAC
CGCAGAAAATAAAACAACGTAAAAAGAAGAAATCTCTCATGATGCTTTGG
AAAGGAAAACATGGCGAACCTGAAGCCAAAGTACAAACTGCACCTGATGA
AGCACATCAAAACTATTATGATCCTCCGGCTGATATCAGAGACAATTATT
TCCTACCCTACTCCAAAAACCCGACAGTTCGAGTCGCTTTGAGTTTTATC
GCAGCTCTTGGAATATCCGTCACGTTGTTTTTAGTGTTACTGCTATTAAC
GAAACTACATCCCGTGTTATGTTTCAGTGTGGCTACTGTTATTTTCATCG
TGCTTCTCGTGGTACCAGTCACGTTATACCATCGTGGTATATTTTGTGTT
ATCATGCTTTTATTTCCAAGCTTGTTTGGTTATCGTTGTAAGATCGTCGC
TTTCATGTTGTTGATCGTATTCTTAATCCTGGGTCCAGTTTTCGGTACAG
CTGATAAAATTCACATAGCTCGCTCATGTGCGAACAATGAGGATTTTTTC
TATAATTCCACTGTGGTTTCTGGTACATTACAGGACGACTGTATGTATAA
GTTCGGTAGAATTGCTGATACTTGCTCAGGATTATTCAATGATTTCAATC
GCTCATGTCGCACCTGGTCTACTCCTAAAGATGGCTACGAACAATTTCTA
TGCAATCAAACCAAAGATTTCTTCTGTCAAACTAAAAAGCAAGCTGAATC
TATTTGTGCTTCGACCATCATAATGACAAACACTTACAATGAGAAGTTGG
AAGTCACTTACACATTTAAAAACATTGTATTTTACCTGCTGCCTTTCTTG
GCATTAATGGTTCTCGCTGAAGCTTACAATTATAACAAAGTGTACCTGAC
CACGAAAAACAAAGACAATATTTACATCACACAACGCTTGCGTGAGCTTG
ATACCGAACGCCGTAACCGTGGTCTCACTGACTTAATTTTACCTTTAACC
CGTATCGAACTTTACACATATCTAGTTCGAGGAAATGTGAACACAACTAA
AGCTGAACGAAATCGTATTTACAAATGGTTGGTGTATTTGTTAGTAATGG
TTTTTATCACTGTCTGTCTCGTTCTGATCGAGAACCATGTCGATATCCTT
CTAACAGCCGTGTTAACGAAGAAATGTCTTGCTCATTACGAGCAGAATAA
TCATTATCGCTATAGAGTTGTCATTTACGCTCTTCTTGGTACAACGCTTT
TCATCATTTTAATGCAAAGTCATGTTTTACGGTTACGAAGTGTTGTTTGC
GATTACATTTATCCTGAAATGGTTGAAACACGTTCCAAACATTTATATTA
TAAAATTCTTCACGATAGACACGCATTTGCGAGACACGTTCGTCGTAAAA
TTCAATTGCTATCTGAAGAGAAGAGGTTACGACTTCGCATTTCATTTTTT
TCGAAAATTTACAACGTTTTGCCGACCAGATTACAATGGGTTTGTGATAA
ATTTACTGTCAGGACTTGCATGATTTGTGATTCTTTATCGTACCGTAAAA
CTGTCGAATGTAACGAGAATTCATGCCGTGCGCATTATTGTTTTGAATGT
CACGTCGATGCTGGTCAAAATTGTTTGACGTGCAAAGTACCTGCACCCAC
ATCGAGAAACAGTACAGTACCTGCCCCTAGGTCAAGTTTTTGTGTGTAAA
TGACGACGGATGACAATAACGTGTATCAAGTCATTGGTAACTACGAAGTA
GTAGACACTGGAAAGAATGAATATCTAGTCGCTTCAAAAGGAGATATTAT
TATAGACTGTGAACGTGTTGATGATAATTGGTTCCGTGGCAAAAATATTC
GATCTGGAACTTACGGTTTAATACCAACAGCCAACGTTGTTTCTGTACAA
CAAAACGAATATCGCGAAATTGAACCTGAATTGGTGGAGAAATTACACGA
AGAAGGTGTTGCTCTGACGACCGATGACGTAGACACGACACTAGATGATG
CAGAGGATAGACAACTTTTGAAGAAAGATCAAAACCCATCGTCAACGACT
TCTCGATTAGCGCGATTAGGTGAAGGGAATTACGTGGATATGTCTTCCGA
AGAAACATTGAACTGTATTGATGAAGAGGATGAGGAGACCAACAATGATG
AAAAAATCCCCCTTCCCAAACGAAGTCCACTCCCTAAACCACCTCGACAT
CCTTCAGTATCTGAAACCTCAAAAGCCAACGACGAAGGATACAATTCAGC
TAGTCATTACAGTGGTGAAAACAACGATAGTAAGGCACCTCTTTTGAATG
ATAACAACAGAACCAACACAATCCCTTACGAAGATGAAGCAGGTTATGAA
GTACCAAAGATTAATCCTTCGCATGAGCTAGAAAACGATGTAGCGCCACC
GCAGAAAATAAAACAACGTAAAAAGAAGAAATCTCTCATGATGCTTTGGA
AAGGAAAACATGGCGAACCTGAAGCCAAAGTACAAACTGCACCTGATGAA
GCACATCAAAACTATTATGATCCTCCGGCTGATATCAGAGACAATTATTT
CCTACCCTACTCCAAAAACCCGACAGTTCGAGTCGCTTTGAGTTTTATCG
CAGCTCTTGGAATATCCGTCACGTTGTTTTTAGTGTTACTGCTATTAACG
AAACTACATCCCGTGTTATGTTTCAGTGTGGCTACTGTTATTTTCATCGT
GCTTCTCGTGGTACCAGTCACGTTATACCATCGTGGTATATTTTGTGTTA
TCATGCTTTTATTTCCAAGCTTGTTTGGTTATCGTTGTAAGATCGTCGCT
TTCATGTTGTTGATCGTATTCTTAATCCTGGGTCCAGTTTTCGGTACAGC
TGATAAAATTCACATAGCTCGCTCATGTGCGAACAATGAGGATTTTTTCT
ATAATTCCACTGTGGTTTCTGGTACATTACAGGACGACTGTATGTATAAG
TTCGGTAGAATTGCTGATACTTGCTCAGGATTATTCAATGATTTCAATCG
CTCATGTCGCACCTGGTCTACTCCTAAAGATGGCTACGAACAATTTCTAT
GCAATCAAACCAAAGATTTCTTCTGTCAAACTAAAAAGCAAGCTGAATCT
ATTTGTGCTTCGACCATCATAATGACAAACACTTACAATGAGAAGTTGGA
AGTCACTTACACATTTAAAAACATTGTATTTTACCTGCTGCCTTTCTTGG
CATTAATGGTTCTCGCTGAAGCTTACAATTATAACAAAGTGTACCTGACC
ACGAAAAACAAAGACAATATTTACATCACACAACGCTTGCGTGAGCTTGA
TACCGAACGCCGTAACCGTGGTCTCACTGACTTAATTTTACCTTTAACCC
GTATCGAACTTTACACATATCTAGTTCGAGGAAATGTGAACACAACTAAA
GCTGAACGAAATCGTATTTACAAATGGTTGGTGTATTTGTTAGTAATGGT
TTTTATCACTGTCTGTCTCGTTCTGATCGAGAACCATGTCGATATCCTTC
TAACAGCCGTGTTAACGAAGAAATGTCTTGCTCATTACGAGCAGAATAAT
CATTATCGCTATAGAGTTGTCATTTACGCTCTTCTTGGTACAACGCTTTT
CATCATTTTAATGCAAAGTCATGTTTTACGGTTACGAAGTGTTGTTTGCG
ATTACATTTATCCTGAAATGGTTGAAACACGTTCCAAACATTTATATTAT
AAAATTCTTCACGATAGACACGCATTTGCGAGACACGTTCGTCGTAAAAT
TCAATTGCTATCTGAAGAGAAGAGGTTACGACTTCGCATTTCATTTTTTT
CGAAAATTTACAACGTTTTGCCGACCAGATTACAATGGGTTTGTGATAAA
TTTACTGTCAGGACTTGCATGATTTGTGATTCTTTATCGTACCGTAAAAC
TGTCGAATGTAACGAGAATTCATGCCGTGCGCATTATTGTTTTGAATGTC
ACGTCGATGCTGGTCAAAATTGTTTGACGTGCAAAGTACCTGCACCCACA
TCGAGAAACAGTACAGTACCTGCCCCTAGGTCAAGTTTTTGTGTGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000370_pilon | genome | sc0000370_pilon:163446..165794 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-2349:2350 |
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