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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000156_pilon:516837..518203+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_030497 ID=XLOC_030497|Name=XLOC_030497|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1367bp|location=Sequence derived from alignment at sc0000156_pilon:516837..518203+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGACATTTCAAGACATTTTTCTCAAGTTCTTGGAAATGATAATTTGTG
GCAACGTCTAGAGTGCGAATATAAGGAAGGGAAAGCTTATCGATATTATA
GTGATGGCTTTCTTGGAGAACTTCATATCAATTTCCCTGAACAAAATCCT
AATGTATGTATCATGAAATCAAAGTGCCTTCCTTCCCAACGTGTATCCAT
GAAACAATACGATGTGTGGGTTATCATACAGCAAAAGGATACTGAGAGAG
AAATGGATGGGCAAATCTTGAGAGGGTATTGCACCTGTACAGCAGGCCTT
CTAGGtaaattgcatttttttctcaataaaaatcatgtcttttataagaa
agatttttataagaatattaggaGCTAAAATTGGGTGAATTTtaagaatt
caaaaatattcccAGGGTGAGTTTGATAAGAATAACTAATTTTAGTAACC
AAGAATAATTTTGATTACTTCGTagtccaaaataataaaaaaaataaatg
acaacCAAGCTTTTAAAGCTTGgttgtatttattttctttattattattt
tattattttattaaagcttagttgtttttttcttatttgttattttattt
aactttttatttcagGGAGCTGTAATCATGTAGCTGGGTTGCTGTTTAGA
CTTGAAATTGCAAATCTCATGGGAGAAACAAGGAAAACGTGTACTTCGTC
ACGATGTAAATTTGTTGAACCCCCACcatcaaagaaaaaagtcattaaaC
CAGGAAAGCTGTCTTCATTTGTATTCAAACAAGAAAAGTACAGTAGGCTG
GCCATTTCTAAGACAAAATCAGATTCAAAGCAAAGTTTAAAACGAAAACT
GGAATATATGCCAATGAGTAGCAGTGTTACTTGTAAAGAACTTGTttctg
aaccaaaaaaaatgagggatattttttacaaatctttcaaaaatgttatt
cCTGACAGTTGTTTCATTCAAATAATGGATGGAAAGCCACTCGATGTTAC
TGAAGAAGTTACTGAAGAATCGAAAATTCTTTCACTTAAGGAACatgcaa
aaatttttaaagacaagaatTGTTATGATACTGAAACATATATCGAAGCT
ATTACACTATCAGATGATCAAATATCAAAAGTTTATGAAAAAACAGTTGC
ACAGAGTAATTCAGAGTTTTGGGTTGAGCAAAGAAAAGGTCGTATAACAg
cttcaaaatttaagaaagtcTTTACAAGAatggaatctttaaaaaaatct
gaccAAGAACCTATTCCCCTTCTAAAAGAGATAATGGGAGAAGACAATAA
AAAACCTACTTGGCAAATGAAACATGGCATTTCGTCAGAACGACATGCCA
TTATGCGATTCAAGCAA Coding sequence (CDS) from alignment at sc0000156_pilon:516837..518203+ >XLOC_030497 ID=XLOC_030497|Name=XLOC_030497|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2112bp|location=Sequence derived from alignment at sc0000156_pilon:516837..518203+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGACATTTCAAGACATTTTTCTCAAGTTCTTGGAAATGATAATTTGTG
GCAACGTCTAGAGTGCGAATATAAGGAAGGGAAAGCTTATCGATATTATA
GTGATGGCTTTCTTGGAGAACTTCATATCAATTTCCCTGAACAAAATCCT
AATGTATGTATCATGAAATCAAAGTGCCTTCCTTCCCAACGTGTATCCAT
GAAACAATACGATGTGTGGGTTATCATACAGCAAAAGGATACTGAGAGAG
AAATGGATGGGCAAATCTTGAGAGGGTATTGCACCTGTACAGCAGGCCTT
CTAGATGGACATTTCAAGACATTTTTCTCAAGTTCTTGGAAATGATAATT
TGTGGCAACGTCTAGAGTGCGAATATAAGGAAGGGAAAGCTTATCGATAT
TATAGTGATGGCTTTCTTGGAGAACTTCATATCAATTTCCCTGAACAAAA
TCCTAATGTATGTATCATGAAATCAAAGTGCCTTCCTTCCCAACGTGTAT
CCATGAAACAATACGATGTGTGGGTTATCATACAGCAAAAGGATACTGAG
AGAGAAATGGATGGGCAAATCTTGAGAGGGTATTGCACCTGTACAGCAGG
CCTTCTAGGGAGCTGTAATCATGTAGCTGGGTTGCTGTTTAGACTTGAAA
TTGCAAATCTCATGGGAGAAACAAGGAAAACGTGTACTTCGTCACGATGT
AAATTTGTTGAACCCCCACcatcaaagaaaaaagtcattaaaCCAGGAAA
GCTGTCTTCATTTGTATTCAAACAAGAAAAGTACAGTAGGCTGGCCATTT
CTAAGACAAAATCAGATTCAAAGCAAAGTTTAAAACGAAAACTGGAATAT
ATGCCAATGAGTAGCAGTGTTACTTGTAAAGAACTTGTttctgaaccaaa
aaaaatgagggatattttttacaaatctttcaaaaatgttattcCTGACA
GTTGTTTCATTCAAATAATGGATGGAAAGCCACTCGATGTTACTGAAGAA
GTTACTGAAGAATCGAAAATTCTTTCACTTAAGGAACatgcaaaaatttt
taaagacaagaatTGTTATGATACTGAAACATATATCGAAGCTATTACAC
TATCAGATGATCAAATATCAAAAGTTTATGAAAAAACAGTTGCACAGAGT
AATTCAGAGTTTTGGGTTGAGCAAAGAAAAGGTCGTATAACAgcttcaaa
atttaagaaagtcTTTACAAGAatggaatctttaaaaaaatctgaccAAG
AACCTATTCCCCTTCTAAAAGAGATAATGGGAGAAGACAATAAAAAACCT
ACTTGGCAAATGAAACATGGCATTTCGTCAGAACGACATGCCATTATGCG
ATTCAAGCAAGGAGCTGTAATCATGTAGCTGGGTTGCTGTTTAGACTTGA
AATTGCAAATCTCATGGGAGAAACAAGGAAAACGTGTACTTCGTCACGAT
GTAAATTTGTTGAACCCCCACcatcaaagaaaaaagtcattaaaCCAGGA
AAGCTGTCTTCATTTGTATTCAAACAAGAAAAGTACAGTAGGCTGGCCAT
TTCTAAGACAAAATCAGATTCAAAGCAAAGTTTAAAACGAAAACTGGAAT
ATATGCCAATGAGTAGCAGTGTTACTTGTAAAGAACTTGTttctgaacca
aaaaaaatgagggatattttttacaaatctttcaaaaatgttattcCTGA
CAGTTGTTTCATTCAAATAATGGATGGAAAGCCACTCGATGTTACTGAAG
AAGTTACTGAAGAATCGAAAATTCTTTCACTTAAGGAACatgcaaaaatt
tttaaagacaagaatTGTTATGATACTGAAACATATATCGAAGCTATTAC
ACTATCAGATGATCAAATATCAAAAGTTTATGAAAAAACAGTTGCACAGA
GTAATTCAGAGTTTTGGGTTGAGCAAAGAAAAGGTCGTATAACAgcttca
aaatttaagaaagtcTTTACAAGAatggaatctttaaaaaaatctgaccA
AGAACCTATTCCCCTTCTAAAAGAGATAATGGGAGAAGACAATAAAAAAC
CTACTTGGCAAATGAAACATGGCATTTCGTCAGAACGACATGCCATTATG
CGATTCAAGCAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000156_pilon | genome | sc0000156_pilon:516837..518203 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 667-1041:993 |
| Aaloc | 307-666:618 |
| Aaloc | 1-303:1 |
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