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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000370_pilon:38574..41352+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_030485 ID=XLOC_030485|Name=XLOC_030485|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2779bp|location=Sequence derived from alignment at sc0000370_pilon:38574..41352+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATGAACAAAGCTGTCCAAGATGCAAGTCAACCAGCTATCGGAACAA
TAAACTGAAATTACTGGTCAATGTTTGTGGTCATAAACTGTaagttttta
aagtattttgttATAGGCTTAAATCAAGGtggaaattatttttacatttt
ctgcaatgaagaaaatccatcatatttatcagaaaaatccAGATACACAA
GATTGTGGGTCCAAATTAAAAGCCAATATTTTCCAGAAGGCAAGAGTAAG
AGAATCAATCTAGGATCTGTCAATTATTTTAATGGCAGCTTTCTGGAAGC
TATTTATTGTGTGCTAGCAATCCTTACCAATTCAAGTTTAAGTTAGAAAT
ATCCAAGCATACATCTTATAAAAGTTccaataaatttgtatttttatagA
TGTTCAACGTGTGTTGATGTGTTGTTTACACGTCCATCAGCTGCTTGTCC
ACAGTGTAATACTGCATTGAGAAGGAGCGATTTTCGAGTGCAACAATTTG
AAGATGCATTAGTTGAGAAAGAAGTCGATATCAGaagaaaaattgtcaaa
atgtAAGATTATTTTTACAATAGTTACTACATACCCCCTACTCCCGGAGC
AGTTTGCGGGAATgcttgaaaattagaaaaagatagCATGAATGTGtgag
tttggaaaaaaaattgcacgattacgtgaattgaaggtctgTAACCTCTG
TACTTTTACATGGTGTACGTTAATACTAGATGAATTTTCTATGAATCCCT
AAGAGTGGATTTTCACCTTTATTTTTGCTGTATATTTTAGATTCAATAAA
AGAGAAGAGGATTTTAAAACTTTGCTTGATTACAACAACTATTTGGAGGA
TATTGAAGTGATAAGTGAGTATCCAAAACATCAAAATGGTCTCATCAATA
TTCTAATTTAATGACGAGGGCTACATACATAATCCAGTTTAGAGTGactg
aattttcattttccattttattCTTACTATTCTTTCTGCTATTTCTTACA
CAAAAATCAAAccttttcttatagaaaatgaaaaaaaagtccaCATCGAC
TACAACAAGTGTCTATCATCACCTTTGATTGTCTTTCAGTTTTCAATTTG
GCAAACAAGCAGAATGTGGATGAAACGAAGAAAAAAGTTGATGcttacaa
aaaggaaaatgagaAGCTTATCCGCAGGAATAACACAAAAATTGTATGTT
ATAAACTTTAATCAATTCTATTCCCATCAATTCTTTGAGCCATCCCCTTA
AAAGCAAAGGAAAAACTTAATGGTTATCCAAATGGGGgttttataaagaa
atatttagtTCTTAAGTGTTAGAAGTTTCTGGAAATATTAAAACGCCAAA
ATTCCTGTCCTGGGGTCtgaaatttttgttctttgCAACATGCAAAATCA
GACCTCTGTTGGAAACAAGTCATGCCAATTGTGGTGACTTTCCAGTATGG
TTTGTGTATTCTTATCCTTTTAATTCTTTCAGAGTCAAGAGGAAGCACTG
ATGAAAGCGTCAATCGAAGCAGACCTACAGAGTGCTGAAACTAAACGTAA
AATGCTAGTGGAAGAAGTCGAAAATGCTGCGTTGCAaaagaagaaggaga
aagaaAACCTTATCAACGATTTGGTTTGTCATTTCATAGCCCTTCTTCGT
GATGCTCTAAGCTAGACTTTCAGCGTTTTAAAGCAGTTAGATTTTCAACG
CTTCATTTCTTAAAATTCTCCCTTTAGCTAAACATTatggcctcgttttc
aaaaagaACAAGAACTTTAACCGACGTTTACTCATTTTGATGTGTTTTCC
CAAAACCTTTTTAGTACAGACGTTTGCAAGAATTAACGATAGCTCAAAAA
AGAACTTGCTCAAGTGGGATTATATTATTGGTTTTCTACTTCATTAATGT
GCCGATTGCTGGTTCACCGACATGTTTTTATTCTTATTCTCTCTTAACAT
TCTTCGACTTTTGTTTAGATCTATGCAAATGCACCAGCGGAAGAGGTCAT
TGCAAGGCATAAACTCATCAAAGAACAACATCAACAGCAAAAAatggaag
aagaagaacaaaagaaatctttcttcttttccgAGAAAAACAAGGTAAAA
TATTTGTCAAGATATAGGGTTGATGGGAGGGGGACCTTaaagttataaag
aaaatgatatctctaataaaatttaaaatttttcttacgTTAAAGAATGT
TAAAAGACATTTAGTCTGTCCATCTCTTCTGTCGACTTGACGACAGACGA
GGATTAGACAATGTATTAttataaaatttcaatattaatCTCCACAGGTC
TATACCTGTTGAATATAATTATATAAATATTTGTTTAAGATGGTATTGCT
GACCCTTATTTTATTCTTTCTTTAGAATTCACACTTTGTTAATCAGCCAA
TTGTGGAAGCTCCTTTGTTTATATATCAAGAATCAACGAGAGAATGGTTC
GGTCCCAGCCCTCCCGAAGAAGACGCTCTCCAATCAAAAGGGTAGGCATA
GATTTAAATAGATAGATTCAAAACATATGTGTCTGATTCCTTTCATGTCC
TTTAAAACGAGTTGTTACTATTAGTTTTTCGGGAAATTTTAGAGAGAAAG
TCGCCATTCAACTACTTTGACTCGAATCCctttccttctttttttcattg
ttatttttgcATTTAAGATACCTGCAACATATTCGGACTGCATCGTCTTC
CGAAAGAGCTGGTGGTTACACGGAATCTATTGCTTGTCAACGTGCTATTC
AAGAAGCATTCGACTGTCTTTTCATCTAA Coding sequence (CDS) from alignment at sc0000370_pilon:38574..41352+ >XLOC_030485 ID=XLOC_030485|Name=XLOC_030485|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1830bp|location=Sequence derived from alignment at sc0000370_pilon:38574..41352+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATGAACAAAGCTGTCCAAGATGCAAGTCAACCAGCTATCGGAACAA
TAAACTGAAATTACTGGTCAATGTTTGTGGTCATAAACTATGGATGAACA
AAGCTGTCCAAGATGCAAGTCAACCAGCTATCGGAACAATAAACTGAAAT
TACTGGTCAATGTTTGTGGTCATAAACTATGTTCAACGTGTGTTGATGTG
TTGTTTACACGTCCATCAGCTGCTTGTCCACAGTGTAATACTGCATTGAG
AAGGAGCGATTTTCGAGTGCAACAATTTGAAGATGCATTAGTTGAGAAAG
AAGTCGATATCAGaagaaaaattgtcaaaatATGTTCAACGTGTGTTGAT
GTGTTGTTTACACGTCCATCAGCTGCTTGTCCACAGTGTAATACTGCATT
GAGAAGGAGCGATTTTCGAGTGCAACAATTTGAAGATGCATTAGTTGAGA
AAGAAGTCGATATCAGaagaaaaattgtcaaaatATTCAATAAAAGAGAA
GAGGATTTTAAAACTTTGCTTGATTACAACAACTATTTGGAGGATATTGA
AGTGATAAATTCAATAAAAGAGAAGAGGATTTTAAAACTTTGCTTGATTA
CAACAACTATTTGGAGGATATTGAAGTGATAATTTTCAATTTGGCAAACA
AGCAGAATGTGGATGAAACGAAGAAAAAAGTTGATGcttacaaaaaggaa
aatgagaAGCTTATCCGCAGGAATAACACAAAAATTTTTTCAATTTGGCA
AACAAGCAGAATGTGGATGAAACGAAGAAAAAAGTTGATGcttacaaaaa
ggaaaatgagaAGCTTATCCGCAGGAATAACACAAAAATTAGTCAAGAGG
AAGCACTGATGAAAGCGTCAATCGAAGCAGACCTACAGAGTGCTGAAACT
AAACGTAAAATGCTAGTGGAAGAAGTCGAAAATGCTGCGTTGCAaaagaa
gaaggagaaagaaAACCTTATCAACGATTTGAGTCAAGAGGAAGCACTGA
TGAAAGCGTCAATCGAAGCAGACCTACAGAGTGCTGAAACTAAACGTAAA
ATGCTAGTGGAAGAAGTCGAAAATGCTGCGTTGCAaaagaagaaggagaa
agaaAACCTTATCAACGATTTGATCTATGCAAATGCACCAGCGGAAGAGG
TCATTGCAAGGCATAAACTCATCAAAGAACAACATCAACAGCAAAAAatg
gaagaagaagaacaaaagaaatctttcttcttttccgAGAAAAACAAGAT
CTATGCAAATGCACCAGCGGAAGAGGTCATTGCAAGGCATAAACTCATCA
AAGAACAACATCAACAGCAAAAAatggaagaagaagaacaaaagaaatct
ttcttcttttccgAGAAAAACAAGAATTCACACTTTGTTAATCAGCCAAT
TGTGGAAGCTCCTTTGTTTATATATCAAGAATCAACGAGAGAATGGTTCG
GTCCCAGCCCTCCCGAAGAAGACGCTCTCCAATCAAAAGGAATTCACACT
TTGTTAATCAGCCAATTGTGGAAGCTCCTTTGTTTATATATCAAGAATCA
ACGAGAGAATGGTTCGGTCCCAGCCCTCCCGAAGAAGACGCTCTCCAATC
AAAAGGATACCTGCAACATATTCGGACTGCATCGTCTTCCGAAAGAGCTG
GTGGTTACACGGAATCTATTGCTTGTCAACGTGCTATTCAAGAAGCATTC
GACTGTCTTTTCATCTAAATACCTGCAACATATTCGGACTGCATCGTCTT
CCGAAAGAGCTGGTGGTTACACGGAATCTATTGCTTGTCAACGTGCTATT
CAAGAAGCATTCGACTGTCTTTTCATCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000370_pilon | genome | sc0000370_pilon:38574..41352 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 805-915:2669 |
| Aaloc | 688-801:2376 |
| Aaloc | 562-687:1969 |
| Aaloc | 421-561:1483 |
| Aaloc | 319-420:1092 |
| Aaloc | 244-315:792 |
| Aaloc | 91-240:401 |
| Aaloc | 1-87:1 |
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