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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000067_pilon:1224494..1228008- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_030413.2 ID=XLOC_030413.2|Name=XLOC_030413.2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3515bp|location=Sequence derived from alignment at sc0000067_pilon:1224494..1228008- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATTGTTGTCATTGCGCATATCCCATTGCATCTAATCAAGTTTTTTG
TACTGCATGTGGTAAACGAAATACTACACAAAATACTGGTGCCAGCACAA
GTACATCAAATCAAGGAAAAAAAACATTCCAGCAATTCTTAGAAGAGAAG
AAGACTGATCGTATATGCAAGTCCAAAAAACAAAAGATTTCTAAAGTTAC
TGTTAATGTCTCTGTTTTAAATGAATTTGTTGGGCAACAGTTCGAGACTT
ATTACAAACAAGTACCAAACTCCCGTCTCCCACTTGAATGTGAGCCTCAA
TGGGACTACTACAAATTACGAGAAGCTGCTTTTGATAAACAAAAACGTTA
CAACAAACTGATTGCATCAAAACAGCTGGAAGATGTAAAACTTGTATATA
ATAAGGATGGTGATATTTGTAAAACAATTCCAGGAACTAACATTCCATTC
ACATTGGAAAAATATCAAAGAGATATCTGTAAGAAATACAAAGATATGTT
GTTTTATCTGTTGCCAATGTTCATTGAAGACGAAGACGATGATGAACCGC
TTCCATCTGCACTAAGCAAAAGACAAAAGTAAGCAATCAATATCTTTTGG
TTTACCTTTCAGAAACAATTTTTGGCAGAATTTAAATTTTTTTTCTATTC
AGGAAAAGTTTTGAGGAAATGTAAATAAAACATTACAAATTTTGAAGATT
GTTGCAGGAGAAAGATTCTACCAGGATTTCTTTCAAAAATAATTCAAAAT
TGGGCTTAAAAGTCAAAAATGCTAACAAAAATTTGACAAAGTTTGACGTC
TTTGAGATTGTGACCATATTTTTTCCATGAGGAAATTAAGACACCAAATT
TGACCCTGGTCTACAGTAGATTCTGTCTTCTTGTGAGCTGCTTTAAAGTG
TACCACTTACTTAGCAACCCTGTCAAACCAGTAAGATCCCACCCGCCTCG
TCCTTATTAATATGGGTAGTGCCAAAGGCTAAAAGAAGATATCTTAAAGC
TATATACAATTTTCTTTCTAGTACTGTATCACAGTAAATTATTAATTCAA
TGCGTTTTTTTTTAGTGACGAGAATCCAGTGAATCCATTACCTTTCAATA
TCTTTGATACAGGAGCAGCAATATCATTCAACAATAATAGTATTTTTGCA
TGATAAAAATCATTAATATTGTGTTTTTATTGTGATTTATGAAATGTTTT
ATGAATTGGCTTCTCACAAAAATGACATTTTGGCTTCATTTGATTATTCC
TGATAATTCATAACATTTTTTCAAATCATTACACTACTATACAGTTATCT
AAGAATTCCAATCTTAATAACTCAATATTTATTGAATTTCAAAATTCTTT
TAGGTCTGTGTAATTTAAGATGCACGATTCATGCATAATTCATGCTAATC
ATTTTAATGCATGCATATTATAGATAATGTTTAAGTGGGTTCTTTTGGTT
TGCTTAAAAGTTAAAAAATATAACATTCGTATTTTCGTCTGATCTAAATA
TTTTTCGACTGTTTTTATTTATCAAAACTCAAGATTTACTAAGGCAAATT
TCTGAGGAAGTAGGACAAGAGAGGTATTTCCAAACTTTGTAAACCCTCAC
TTTATGGGTATTTCTGTTAATTTAACTCACCCAGTCATTCTTTTATAAAA
AATGAGTTGGGTAAAAAGTTAAAACATTCAGTAGAAATTGTTTAGTTATA
AATATTGAAATATAGCGTAAAAAAATAATGCCTTTAAACGGCTGGTTTAT
TTTGAATTCAAAATTGTATTTCTCTATTGATAGGCTCTACAGTTTCTGCA
AATCCACACAACTCTACTGTCGAATTTGGAGCCAACTCTCAGAATGATCA
GCTTCTTTCTTCAGTCACGCATCCCTGGAATCATGGTAAGTTTGTTGATA
AGTGAAAATTTTTAATTAAAGCAGGTTTGTGAAAATTTATCATTCAAGCA
TATTAAAGAATGTTCTCCTAGTATATTCCTTTCTTTTGACACTTTGTATT
GATGAAATGTATTTTGTTATTGACAGCTTCAATGGATTCTGCCGCCGCTC
GCAACACCTCTTTTGAATATTCAACAAATCATGTGAACAATCAACTCAGT
TCTTTGATTGCACCTGCTTCAATTGAGGGTATGTTTTTAATTGTGTTGAG
TGTTTATAGCCCCCCCCCCCTTAAAAGTGAGGTTACACCCCAAAAAAGAT
GGAGGCTAAATCTGTTTCAAATATTTCGGGGGGGGGGGCTGGCTAGAGTT
TACCATACTTTTGACTTTCAAGTATAATCGGTCTGTCTCTTTCTGTCGTT
TTGTATTTTCTCTTTTTTACTCTTTTTTTTTGCGAGAATATTTTACTGAT
ATGCTTCAGGAAGAAGTTTAAAAGTAAAAGACTGAGGACTGAAATTCAAT
GGGGATTGATATACCCACGTTTTTTATGACTGGGTATTCAAATTCCATTA
TTTTCAAATCAGAGAAGTCACAATGTTTTGCAGTGAGGATTTATTTATTT
AATCATTTTCAGCGGAGATAGAAACTTCCACTGGAGATGATATTTCCAGT
GGGAGGGGCTCCTGCAAGAACAGTATTTTAAGCTTAATTTCTAATGGAGA
TGAAAGTGCACTGTATTCTTGTGATATTTCAGTGTTTTCAGAGTGATAAT
AGTACAGTTAAAGGTTCGTATGAGTGATTACTTTTAGAAGGATCGTTTAA
TGATTTTTCTAGTACTGATCACTCATAAAGAAGAACAAACACCCAGGGGT
GGATCTAGCGAAACTGCTTTATGAGGGTAACTCGAATCGGGCAAGCAATT
AATAAAGAGTTAATTAGTTAAAAAATTATTTGCTTTTACAGGCTTTAATA
ATTCATTTGAGGAAAGTATCTCATATAATTTAAAAAGAGAGAATTGACCA
TATTACTTGGAGGTATATTGATCATTTGTGGTTTTTTCTTACGCACGCGC
ACAATAGCACGTCAAAAAACACTTTTCAGCCTGTACTCGTCAATTGATAA
TGGCGCGCACAGGCCCCGACAAAGTCAAATCTTTTCGACCAGTTGCTTTT
AAAATTTTTGGCTTGGACCTAAACCTAGGCTGACGCTATGTATCAGTCAA
CAAAGTTCGAATACAGTAGTTACTGCTTGACACACCTAGAATCGAGTCTG
ACAAAGACGCGCCTTCGTTAATCTCAGAATGTACGTATGTACATCAGATT
ATATGAATTAACTGTAACAAAAATCAACTCCTTAAACTCGGAAGAAAACT
GATAATTATCATGGCGACTAAGTAAAGCTTTTCCCAATATCACTTTTTGT
AAAAAAATATAGCCTTGACTTCCACAAAAAAAAGCCTTTGATTTCCATCT
TAGATAATGAAGTTGCGCGCAGTGCATTTTAACACGTTACTATTGTCAAT
TTATTATTTGTTCTTGGTAGATTCAACATATTCTACAGTTTCTCACAACA
CTTCTTTGGTTGCAAGCTCTTCGAATGACCAGCTTCTTTCTTCAATTGCA
CCAAACTCAATTCAA Coding sequence (CDS) from alignment at sc0000067_pilon:1224494..1228008- >XLOC_030413.2 ID=XLOC_030413.2|Name=XLOC_030413.2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1902bp|location=Sequence derived from alignment at sc0000067_pilon:1224494..1228008- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATTGTTGTCATTGCGCATATCCCATTGCATCTAATCAAGTTTTTTG
TACTGCATGTGGTAAACGAAATACTACACAAAATACTGGTGCCAGCACAA
GTACATCAAATCAAGGAAAAAAAACATTCCAGCAATTCTTAGAAGAGAAG
AAGACTGATCGTATATGCAAGTCCAAAAAACAAAAGATTTCTAAAGTTAC
TGTTAATGTCTCTGTTTTAAATGAATTTGTTGGGCAACAGTTCGAGACTT
ATTACAAACAAGTACCAAACTCCCGTCTCCCACTTGAATGTGAGCCTCAA
TGGGACTACTACAAATTACGAGAAGCTGCTTTTGATAAACAAAAACGTTA
CAACAAACTGATTGCATCAAAACAGCTGGAAGATGTAAAACTTGTATATA
ATAAGGATGGTGATATTTGTAAAACAATTCCAGGAACTAACATTCCATTC
ACATTGGAAAAATATCAAAGAGATATCTGTAAGAAATACAAAGATATGTT
GTTTTATCTGTTGCCAATGTTCATTGAAGACGAAGACGATGATGAACCGC
TTCCATCTGCACTAAGCAAAAGACAAAAATGTATTGTTGTCATTGCGCAT
ATCCCATTGCATCTAATCAAGTTTTTTGTACTGCATGTGGTAAACGAAAT
ACTACACAAAATACTGGTGCCAGCACAAGTACATCAAATCAAGGAAAAAA
AACATTCCAGCAATTCTTAGAAGAGAAGAAGACTGATCGTATATGCAAGT
CCAAAAAACAAAAGATTTCTAAAGTTACTGTTAATGTCTCTGTTTTAAAT
GAATTTGTTGGGCAACAGTTCGAGACTTATTACAAACAAGTACCAAACTC
CCGTCTCCCACTTGAATGTGAGCCTCAATGGGACTACTACAAATTACGAG
AAGCTGCTTTTGATAAACAAAAACGTTACAACAAACTGATTGCATCAAAA
CAGCTGGAAGATGTAAAACTTGTATATAATAAGGATGGTGATATTTGTAA
AACAATTCCAGGAACTAACATTCCATTCACATTGGAAAAATATCAAAGAG
ATATCTGTAAGAAATACAAAGATATGTTGTTTTATCTGTTGCCAATGTTC
ATTGAAGACGAAGACGATGATGAACCGCTTCCATCTGCACTAAGCAAAAG
ACAAAATGACGAGAATCCAGTGAATCCATTACCTTTCAATATCTTTGATA
CAGGAGCAGCAATATCATTCAACAATAATATGACGAGAATCCAGTGAATC
CATTACCTTTCAATATCTTTGATACAGGAGCAGCAATATCATTCAACAAT
AATAGCTCTACAGTTTCTGCAAATCCACACAACTCTACTGTCGAATTTGG
AGCCAACTCTCAGAATGATCAGCTTCTTTCTTCAGTCACGCATCCCTGGA
ATCATGGCTCTACAGTTTCTGCAAATCCACACAACTCTACTGTCGAATTT
GGAGCCAACTCTCAGAATGATCAGCTTCTTTCTTCAGTCACGCATCCCTG
GAATCATGCTTCAATGGATTCTGCCGCCGCTCGCAACACCTCTTTTGAAT
ATTCAACAAATCATGTGAACAATCAACTCAGTTCTTTGATTGCACCTGCT
TCAATTGAGGCTTCAATGGATTCTGCCGCCGCTCGCAACACCTCTTTTGA
ATATTCAACAAATCATGTGAACAATCAACTCAGTTCTTTGATTGCACCTG
CTTCAATTGAGGATTCAACATATTCTACAGTTTCTCACAACACTTCTTTG
GTTGCAAGCTCTTCGAATGACCAGCTTCTTTCTTCAATTGCACCAAACTC
AATTCAAATTCAACATATTCTACAGTTTCTCACAACACTTCTTTGGTTGC
AAGCTCTTCGAATGACCAGCTTCTTTCTTCAATTGCACCAAACTCAATTC
AA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000067_pilon | genome | sc0000067_pilon:1224494..1228008 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 859-951:94 |
| Aaloc | 757-855:1488 |
| Aaloc | 655-753:1731 |
| Aaloc | 580-651:2450 |
| Aaloc | 1-576:3516 |
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