|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000043_pilon:1364562..1367055+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_030404 ID=XLOC_030404|Name=XLOC_030404|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2494bp|location=Sequence derived from alignment at sc0000043_pilon:1364562..1367055+ (Clytia hemisphaerica_ch_hm2_pilon)
atggtACAAGAATTCAATGTGGTGTGCTGTTATTCGTGTCAAACCTATCA
AGTTGACCAGGTATTATTAATTATAAAATTTCAATTGAACTCGGAGGCTA
TTGAAATTCTGAAAAgatatactttaggcgtagaaactttcgcgagcaga
aactttcgcgattttcgcgaattttggcccttttcgcgaaagtaaatgtc
tttaaaaattctaggaagggccattcgcgaaagtttatgctcgcgaaaaa
ttcttgacaaaatagaaaatctgtaaaacttcaaactttgaataaaatgt
aacttttatggcactttttagcctgctaaaagactaataagtcaaatgtt
tcaagccaaccaaagaagtatttgtgtctcGAAGCCAtcttttcatgtga
aaattctcaattttgcgtcttgattcgcgaaagtttatgctcgcgaaaaa
tatttttccgttaaattcgcgaaagtaaatgtcgtgaatttcgcgatttt
tcgtcctcgcgaaagtttctgctcgcgaaagtttgtacgcctaaagTAGC
TTGTCCATTAAGAAATTTTGTAGGAATCTTTTATTGGCGCAATTGTTTAT
AGACTTACACGTATCGAGTTTGAATTTGATGGTGATTTATATTCGCCCCT
TATTCGAAACACGGAGATTTTcgctgttttttcaaaaaagagagCTAGCG
AAGTTTGCAGTGGTAAAGCTCTATTAATTTTGTAtcttttaggtgaagaa
aagtACCAACAAATGGACTTGTAAAATGTGCCAAGAGAAACAAACATTGA
AGCAAGTTTTCTTCAGAGGCTCAGGGAAGGATTGTAGGCTTCAAGCTCAG
CAAAGAAATTTAAATAGACAAAGACAAACTACTCAAGATGAAGAGGCTAT
GCTTTCAAAACGAGGTATTTTGAAGTCTTATCTAACTTAGTTTTGATCTG
GTAATACCATTCTCGGGATGGATTTTTCTTAAGGGATATCATTTTAGGTA
tgtacttttattttcatacaCCGTATTTTCAAACAGTTTTCCTTTCTACA
TTTCTTTCTTATTTATGTTATGTGAATGTCAGCTGGTAAAACGGGCCCAG
TGAGTAGTTAGTATCTGGAATTATGTTCGCTGCCGCTGTTCactcaaata
ataataattttctacgtgtacaattttttctggaagaactTCTTCTCAAT
TTAGCCGTTTTTGTCTTTAAATACAGATGAAGAAGAGGAACACGATGATT
TTGACGAAACCCACGATACTTATCATCAAAATTATGTAAAAGATCCAACA
CAAAGTAGATGGAACGCCTTTGTCAATAAAGAACAGAGTTGTGGTATGAT
TCTGTcaattctttgtttattttttccaaagttgCATCGTATCCTTGACT
GAAGATTTTCGGGCGACCAAAATCTTAGAATTTCGCCAGTTTACACTATG
AGATTCTGTCAGTTCGAAGCAATGGAataaaataccttatcggggaaaaa
gatgtcggggaaaagtgacgaaaattttgagggggtgacgaaatttttcc
ctgcTGACGAAATATTctcccgatattttatcactcGACCTCTATGCTCG
ACCAAAACTTGCACCCGATTTTCTTATCCCCAACCAAAACGTTTACCTGA
AATTTtataccgcaaccaaaattcaaatctaatttaCCGAATTTACTGCT
TTAAACGTCTAATTACAAGAtccattttcgagctagtgaaggaaaccatt
tcttttggacagtttagtcgggtgaaagtgacgaaaatgcctctaggtga
cgaaatttttcttcGACGAAAgaaaaccccgactaaataaagctctgaca
ttttttccccgatgaGGTATCCATTCTGATCAAAAGCTAACCTTTCTTCT
CATTTCTTTCTTACTTCAGATCTTGATTCGGAAGATGCGCCGCCATCAGT
TGGATTCCGGGGTGAATATATTGGTACTAAACCAAGGAAGCGTAAATCTT
CATCAGTGAACGAATCTAAAACAAACAATCACACAGAAAACGTTCAACGA
AAGTTTTTCAGATCAGTAACCTCCCTGGACGGTCGAAATCATATGCAAGA
TTCGTATGGTTCAAAGACTGATTCTCCGATAGAAACATTTCCTAAACCAG
CTAATACTGAAACGTCTCGAAGTAAGTTCTTTCGAAGTCATAAGACACTG
AAAAAACCGTCCACGATGAACTTGAACAATGAAATAGCACCAAATACTTC
TAGACAGGACGGCAGATACGAATTTGATTATGAGAAATTTTGGGATGATA
AAAAGTCGACATTAGAAAGCAAGCAAGAGGGTTTGACTGAGACATCATTT
CTAGAATTACAGTATGGAGACGAAAACTTGTTAGCCACAGAATGCAAAAC
GACTACTGAAACAAAGACGTGCAACGATTTTAAAAAGCCTTCCAAATGGT
CCAATTTTTTAACGGTTGAAGATGAAGTTGACAGTGACGATTAA Coding sequence (CDS) from alignment at sc0000043_pilon:1364562..1367055+ >XLOC_030404 ID=XLOC_030404|Name=XLOC_030404|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1848bp|location=Sequence derived from alignment at sc0000043_pilon:1364562..1367055+ (Clytia hemisphaerica_ch_hm2_pilon)
atggtACAAGAATTCAATGTGGTGTGCTGTTATTCGTGTCAAACCTATCA
AGTTGACCAGatggtACAAGAATTCAATGTGGTGTGCTGTTATTCGTGTC
AAACCTATCAAGTTGACCAGgtgaagaaaagtACCAACAAATGGACTTGT
AAAATGTGCCAAGAGAAACAAACATTGAAGCAAGTTTTCTTCAGAGGCTC
AGGGAAGGATTGTAGGCTTCAAGCTCAGCAAAGAAATTTAAATAGACAAA
GACAAACTACTCAAGATGAAGAGGCTATGCTTTCAAAACGAGgtgaagaa
aagtACCAACAAATGGACTTGTAAAATGTGCCAAGAGAAACAAACATTGA
AGCAAGTTTTCTTCAGAGGCTCAGGGAAGGATTGTAGGCTTCAAGCTCAG
CAAAGAAATTTAAATAGACAAAGACAAACTACTCAAGATGAAGAGGCTAT
GCTTTCAAAACGAGATGAAGAAGAGGAACACGATGATTTTGACGAAACCC
ACGATACTTATCATCAAAATTATGTAAAAGATCCAACACAAAGTAGATGG
AACGCCTTTGTCAATAAAGAACAGAGTTGTGATGAAGAAGAGGAACACGA
TGATTTTGACGAAACCCACGATACTTATCATCAAAATTATGTAAAAGATC
CAACACAAAGTAGATGGAACGCCTTTGTCAATAAAGAACAGAGTTGTGAT
CTTGATTCGGAAGATGCGCCGCCATCAGTTGGATTCCGGGGTGAATATAT
TGGTACTAAACCAAGGAAGCGTAAATCTTCATCAGTGAACGAATCTAAAA
CAAACAATCACACAGAAAACGTTCAACGAAAGTTTTTCAGATCAGTAACC
TCCCTGGACGGTCGAAATCATATGCAAGATTCGTATGGTTCAAAGACTGA
TTCTCCGATAGAAACATTTCCTAAACCAGCTAATACTGAAACGTCTCGAA
GTAAGTTCTTTCGAAGTCATAAGACACTGAAAAAACCGTCCACGATGAAC
TTGAACAATGAAATAGCACCAAATACTTCTAGACAGGACGGCAGATACGA
ATTTGATTATGAGAAATTTTGGGATGATAAAAAGTCGACATTAGAAAGCA
AGCAAGAGGGTTTGACTGAGACATCATTTCTAGAATTACAGTATGGAGAC
GAAAACTTGTTAGCCACAGAATGCAAAACGACTACTGAAACAAAGACGTG
CAACGATTTTAAAAAGCCTTCCAAATGGTCCAATTTTTTAACGGTTGAAG
ATGAAGTTGACAGTGACGATTAAATCTTGATTCGGAAGATGCGCCGCCAT
CAGTTGGATTCCGGGGTGAATATATTGGTACTAAACCAAGGAAGCGTAAA
TCTTCATCAGTGAACGAATCTAAAACAAACAATCACACAGAAAACGTTCA
ACGAAAGTTTTTCAGATCAGTAACCTCCCTGGACGGTCGAAATCATATGC
AAGATTCGTATGGTTCAAAGACTGATTCTCCGATAGAAACATTTCCTAAA
CCAGCTAATACTGAAACGTCTCGAAGTAAGTTCTTTCGAAGTCATAAGAC
ACTGAAAAAACCGTCCACGATGAACTTGAACAATGAAATAGCACCAAATA
CTTCTAGACAGGACGGCAGATACGAATTTGATTATGAGAAATTTTGGGAT
GATAAAAAGTCGACATTAGAAAGCAAGCAAGAGGGTTTGACTGAGACATC
ATTTCTAGAATTACAGTATGGAGACGAAAACTTGTTAGCCACAGAATGCA
AAACGACTACTGAAACAAAGACGTGCAACGATTTTAAAAAGCCTTCCAAA
TGGTCCAATTTTTTAACGGTTGAAGATGAAGTTGACAGTGACGATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000043_pilon | genome | sc0000043_pilon:1364562..1367055 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 352-924:1922 |
| Aaloc | 235-348:1229 |
| Aaloc | 61-231:743 |
| Aaloc | 1-60:1 |
|
