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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000066_pilon:535781..537812+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_030358 ID=XLOC_030358|Name=XLOC_030358|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2032bp|location=Sequence derived from alignment at sc0000066_pilon:535781..537812+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATTATTACATAACTTGCAATGGGAGAATACTTCAAGGTGATGAGAC
CCCCAATAATATGGGCACAATTAGAATTCACCCAAGGCTTGTGGGTGGAA
AAGGAGGTTTTGGATCAATGCTGAGAGCCATTGGTgcaagaattgaaaaa
acaaccaatcatGAAGCATGTAGAGATTTGAATGGCAGAAGAATGAGAGA
TGTcaataatgaaaaaaagtttgttttattAGGGCTAGCTCAAAATGAAG
GTCACAGGTCATTATGTCATGCAGACTACAAACCAAAAAATTCTTAACAC
ACTCGTGACATTATATTTCATAGTATAAATTaaaaccgtacatcctgtgc
ccaagttcaggagttgccataaagttatggtaataaccgggagggcacat
tgctatacattgtagcataaatttatgaaaatatgcAACGTTAACACAGA
ATATGCTATTTATAAGATTTAAAATGACAAAGATAATTTTTGTTACCACA
TTGTaatataatgataaaaatattaCAATAGACCAGGTGTTATATATACA
GCATGTAGTAAAAACCTAATTACtatattttttaacaattacAAGTATTT
TTCAACTATTTTCATTGTGTTTTGCAGTAATTAAAGCAGACTTGTTAata
ctgacctgtgacctgtggaCCTGTGATCTGTGTTTTAAGCTAGCTAGTTC
TATCAGTTTCTCCAAGAGATTATTTTATAGAGACATGTCCCTATTGTATT
CTTTCTGAAGGGAAGTCTTGAATGCCACATGtaaaaaaatgtagttttaa
aataaattgcTCTGCTTTATCATTTGCATTTCATCTTAAAAAACGGTGTG
TATCAAAAATTGCACTTAATTAATTTTGCATCAAATGTTAGAAGCTTTCA
GAAAGGATCATTataatctatatttttatttttattatattaggATAACA
GAATGGCTGCAGGAGCAAGATACCAAGGAGAAGGAAAGAATCCAGAAACA
TAACGACAGAATAGAGCGAACACTAAATCCCAAAATGAGATATGAGGATA
AGGACTACACCAAAAGTATACAAGGCAATGTTGACAAAGTCAATGAAGCT
GTCAAAATTGCAACTAccgtaaacaaaaataaaccagGTGAAAAGCGTAA
AACCACAGAGCAAGTTTCTAATagtaaaaaatccaaaatgtggTTGGGTC
TTGATGAATTAGACTCTGATGTAGATTCTGAGGTTTCGGAAAGTGACCCA
GAAGATGGTGAAATCACTAACAAACTTGCCAAAGAACCGAAGACAGATCA
ACAGACTAAAAAGCAAGAAGAATCCTCCGGAGATCCAGTAACAACTGCAA
TTGAATCTGATAAGGACAAGGTGCCTGAAGAgaaaaaatatgtagaaaat
aaagaggaatcttcgccaaaacaaaatgaagaagtacaaaagaaagCTAC
GGTAAGTTAATCACAAGGGtttttttGTTACCTTAAAATCATTGGAAAAC
CCCTAAAACTACTTAAATAAAGAAATTGGAATAAGAAGGGAAAATGACCT
TATAATAGGGTAGGGATTTCAGATTTTCAATTATATTTAGTGATAATGTA
CCATAAGCAAGTAATAATTACAATTTAATTTGACCAACATAATCCAGAAT
TTGTCTTTGTGAAGACACTGTAAAATGACTATCTTCTCTTGGAGTAGGCT
GATTTATAAAGAGATGGGTATAAGCCCCTCTTCACACTAACAGCTCAATT
TATTCTGTTAAGGATGAACtttttatataataacaaaaacaatttatttt
aattGCTTTGTTTATTTCTTCATTACAGGGTCCTGAATATTTATGTCTTG
ATGAGTACAAAGATGCTGAGGAATTGCAATCAGTTGGTTTGGAACGTTTA
AAATCAGCTTTAATGTTTCATGGTATGAAATGTGGTGGCACATTACAACA
ACGTGCTCAAAGATTATTCCTTACCAAAGGaaaaaaaTCTCTGAAAGATC
TTGACCCTTCTTTGTTTGCCAAAAAGAAATAA Coding sequence (CDS) from alignment at sc0000066_pilon:535781..537812+ >XLOC_030358 ID=XLOC_030358|Name=XLOC_030358|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1860bp|location=Sequence derived from alignment at sc0000066_pilon:535781..537812+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATTATTACATAACTTGCAATGGGAGAATACTTCAAGGTGATGAGAC
CCCCAATAATATGGGCACAATTAGAATTCACCCAAGGCTTGTGGGTGGAA
AAGGAGGTTTTGGATCAATGCTGAGAGCCATTGGTgcaagaattgaaaaa
acaaccaatcatGAAGCATGTAGAGATTTGAATGGCAGAAGAATGAGAGA
TGTcaataatgaaaaaaaATGGATTATTACATAACTTGCAATGGGAGAAT
ACTTCAAGGTGATGAGACCCCCAATAATATGGGCACAATTAGAATTCACC
CAAGGCTTGTGGGTGGAAAAGGAGGTTTTGGATCAATGCTGAGAGCCATT
GGTgcaagaattgaaaaaacaaccaatcatGAAGCATGTAGAGATTTGAA
TGGCAGAAGAATGAGAGATGTcaataatgaaaaaaagATAACAGAATGGC
TGCAGGAGCAAGATACCAAGGAGAAGGAAAGAATCCAGAAACATAACGAC
AGAATAGAGCGAACACTAAATCCCAAAATGAGATATGAGGATAAGGACTA
CACCAAAAGTATACAAGGCAATGTTGACAAAGTCAATGAAGCTGTCAAAA
TTGCAACTAccgtaaacaaaaataaaccagGTGAAAAGCGTAAAACCACA
GAGCAAGTTTCTAATagtaaaaaatccaaaatgtggTTGGGTCTTGATGA
ATTAGACTCTGATGTAGATTCTGAGGTTTCGGAAAGTGACCCAGAAGATG
GTGAAATCACTAACAAACTTGCCAAAGAACCGAAGACAGATCAACAGACT
AAAAAGCAAGAAGAATCCTCCGGAGATCCAGTAACAACTGCAATTGAATC
TGATAAGGACAAGGTGCCTGAAGAgaaaaaatatgtagaaaataaagagg
aatcttcgccaaaacaaaatgaagaagtacaaaagaaagCTACGgATAAC
AGAATGGCTGCAGGAGCAAGATACCAAGGAGAAGGAAAGAATCCAGAAAC
ATAACGACAGAATAGAGCGAACACTAAATCCCAAAATGAGATATGAGGAT
AAGGACTACACCAAAAGTATACAAGGCAATGTTGACAAAGTCAATGAAGC
TGTCAAAATTGCAACTAccgtaaacaaaaataaaccagGTGAAAAGCGTA
AAACCACAGAGCAAGTTTCTAATagtaaaaaatccaaaatgtggTTGGGT
CTTGATGAATTAGACTCTGATGTAGATTCTGAGGTTTCGGAAAGTGACCC
AGAAGATGGTGAAATCACTAACAAACTTGCCAAAGAACCGAAGACAGATC
AACAGACTAAAAAGCAAGAAGAATCCTCCGGAGATCCAGTAACAACTGCA
ATTGAATCTGATAAGGACAAGGTGCCTGAAGAgaaaaaatatgtagaaaa
taaagaggaatcttcgccaaaacaaaatgaagaagtacaaaagaaagCTA
CGGGTCCTGAATATTTATGTCTTGATGAGTACAAAGATGCTGAGGAATTG
CAATCAGTTGGTTTGGAACGTTTAAAATCAGCTTTAATGTTTCATGGTAT
GAAATGTGGTGGCACATTACAACAACGTGCTCAAAGATTATTCCTTACCA
AAGGaaaaaaaTCTCTGAAAGATCTTGACCCTTCTTTGTTTGCCAAAAAG
AAATAAGGTCCTGAATATTTATGTCTTGATGAGTACAAAGATGCTGAGGA
ATTGCAATCAGTTGGTTTGGAACGTTTAAAATCAGCTTTAATGTTTCATG
GTATGAAATGTGGTGGCACATTACAACAACGTGCTCAAAGATTATTCCTT
ACCAAAGGaaaaaaaTCTCTGAAAGATCTTGACCCTTCTTTGTTTGCCAA
AAAGAAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000066_pilon | genome | sc0000066_pilon:535781..537812 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 727-930:1829 |
| Aaloc | 220-726:945 |
| Aaloc | 1-216:1 |
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