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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000066_pilon:803441..806588+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_030351 ID=XLOC_030351|Name=XLOC_030351|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3148bp|location=Sequence derived from alignment at sc0000066_pilon:803441..806588+ (Clytia hemisphaerica_ch_hm2_pilon)
TATTCACAGGTTGTGGTCAAAAATACATCACCACTACAACTAGAGAGTTT
GAGGTTTGTTTATTAATCTTATtacttctgtttttttttaattgtataaT
AATTTTTGAACGCATATTTACACATGTAAAGAAATAGAGGATTGTCAAGT
CATGGTGCTATGcagatttcaacttttttccaaGAGGTGAAAAGAACATG
CAAGTGCAAGTGTCTTTTAGTGATATTAAGAGCTAGGAAGGGTCTTTGCT
CCAAATCCTGAATGTATTTAAAGTTACAGTATTCAAAATTACTCTAGACC
TTTGATTTGTGAATATGATATATATTTAAATACGCTAGATCAGGCTAGAT
CAGCAGCTTTATACTTCAAAATCTTCAATGCTAATAGTATAAAGTAACTT
AACTTTCATAAATCATAAATTAAAACTTTTCTCATATCTAGGAAACGTAT
ATTGTTTGTTGTCATATTTTGCAACATTGTGTTCTTAACAACTGATATTG
TCAGTTCATTCTATGGTCTGCATGCTTCTGGGAAGCAAACTTATACCATT
ATTCGTGTTGTGGTTGATTATCTCATGTTTATGTTTGCAGCACTAGTTCT
ATGTTATTGCATAATCAAGGTATTTATAAATGattcaaattttataattt
attcatttttttgctGGTACAGTCATTTTGGATTACTTTCCATAAAGTGT
AGCCTTACTTTCAtaacattttcaacattttttactTCTTGTTTTATCTA
CATGTCAGAAATTTACAACATTATTTATTTGCCTTCCATTCTTCCTTCCA
AGCTAGCATACTATAGCTTTTAGATAAGAACAGTGCTATTTGGACGCTCT
GAAAGTTACCTTTTGCTTATGATAATACTACTccaattttgttaaaaata
aacttgaaaTTTACAAAGAATTAAAAAGAGTAAGCAAGTAacgtttcaat
atttttttgtttaattataAGGTTAAGCTATGGGCTTATATAGTTCAATT
AGAAATGTGaccctgttcttatttattttaGTTAACTAAGCTGCAAACAG
CCAAGCTGACCTTGGATGGACAGGTTTGAGATTAACTTCAACTTTGTAGA
ATTTTTCCGATATTTAGCTTTCAATTCCCTGCCGTGAAGTGATTGTCTAT
AAACATGTTCCTTTTTCGAAAGAACCCTTCCAATTTATTGAATGTTTAGC
TCCAAATTACTTTTCTGGTAGAAGTAAATCCTGCAATTGTTCTCTTTTGA
ACTCAGGGTGTTTCCTACTGTCAAGCAGTCACAACATGTACTATCATTGC
CCTGCTATACATCAGCAGAGCATTTTACAACATCTTAGCTGTTTCACCCA
TACATCTTCCAACTTTTGGTTATGGTTGGATAAATGTCTCAGACCAGGTA
TCATTGTGATGATCTTTTCATtgtgatatttttatgaaataaaaatactc
taaaaaatatatatataacgTGAACTTTTTAAGAATCTGTTATGATTTGT
GATGCTGAAATTATGTATCGCTTTATCTATGAAGACTCTGGTGCTCTGTA
AAATTTTCACCAGGTCTTATTTTAATATCAGCTTTAAAATACATTCAAGA
TTTTTCGCTTAGACCCATCAgagtttgttttctttcttaggGGGAAGAAG
GACAAGATGGCTATGTGAAGGAAACTACAGAGGATTATGCATTTATTTCT
TTTGGATGTGTGTTATTTGTCTGGGAGCTTCTCCCAACATTTACTATCGT
TTGGTTTTTCAGGGTCAGACAGCCTGAAGGCAGACTGGTAAAAATATGGA
TTTTGTTCTTATTACATTGATTTTATATACCAAATAATAGTAATATATTA
CTTGACTTTTAGAAGATTGATTTTCTGCAATAACAAATTACAGTCATATT
AAATATGACCAGAAAAACAGTAGAAAATAAATATGTAgcataataaaagt
tttttggctttttctaaaaatgtgaaaaatggcCTTAGACCTTTTTAAAC
CTCACCTCTTTTGGACTTAGGccattttaaaattaattggCTATGAgaac
ttaggcctttttaaaattaaggtTGTGATTTGATACAACAGGGGGGTCAG
GGCccaggataccaacccagggcccaaaaacctgacttttcgagatttga
aagtagtagacaccaccaccccctcattttggtatcgataccaacttgac
tttttgaaatttgaataaaaaaaattgacaccaccccccggccctgggtt
tggtatctggatcctgacccccccTGGATACAATACTTTAGTCTCCTTTC
TGTATTTGACTCTTATTTTCTCATCCAATAGACTTCAAGTGGGTCAAAAT
CGGATAGTTATCATGCAAAGATTTATTTCTTTGACAATCCTAATCGTTAT
GATTCAGATGATGATATGGCTGTGCCTTACACACCACCTTCACACACTGG
GTATGTCACAACCTTAATTTGACAATCTTACAACCCTTCAACCAAAAACT
ATAATGTAATCGGGCAGTGAAAAAGGGTTTTTAAAATGTGCAAAAGAAGC
AATGTCATTGAATGACTAAAGAAGAAGGCATTTGTTTTAGCCTGTTGAAG
TTTTGTCTTGCCCTTGCAGTGTGTCTATAGGTTACCTTATTACACTGATG
ATAAAAGTTTAGTTCAAATACATTTGTCATATCAATTTAGCACTAATGAT
GGCATAAGACCAAAAAgagtttttcaagttcaaaaaagTAATAACATGAC
TAATTGTAAATAAGGTATCAATTTGCCTTCTATTATTATTAGGTTATTTC
TCATTATAATAAAAGTGCTCAAATGAGTCAGCGTTGTTTTTGTCTAAAAT
TTGTTATCAAAGTttaataaatttatattttaggcTTCTCGGTGCGCACT
CATTTGGGGCTCGTGGAAGTTCACCTCAAAACTCTTATCCAAACCGGAAA
ATTGTTTCCTCATATGGATCAGTGCCACCATACACAGGAAGTTATAACCA
ATCTGTTGAAAGTACGCAAAGTCCACTTATCCGTGGAACAACACCACCTC
TTCTTTTTCCAAGGACATCTCTTGGGCACACGCAACAATCACCAACTTCA
ATACTCAGACATCATCATACCAAAGACACTCAATCACCAGTACCTTAA Coding sequence (CDS) from alignment at sc0000066_pilon:803441..806588+ >XLOC_030351 ID=XLOC_030351|Name=XLOC_030351|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1890bp|location=Sequence derived from alignment at sc0000066_pilon:803441..806588+ (Clytia hemisphaerica_ch_hm2_pilon)
TATTCACAGGTTGTGGTCAAAAATACATCACCACTACAACTAGAGAGTTT
GAGTATTCACAGGTTGTGGTCAAAAATACATCACCACTACAACTAGAGAG
TTTGAGGAAACGTATATTGTTTGTTGTCATATTTTGCAACATTGTGTTCT
TAACAACTGATATTGTCAGTTCATTCTATGGTCTGCATGCTTCTGGGAAG
CAAACTTATACCATTATTCGTGTTGTGGTTGATTATCTCATGTTTATGTT
TGCAGCACTAGTTCTATGTTATTGCATAATCAAGGAAACGTATATTGTTT
GTTGTCATATTTTGCAACATTGTGTTCTTAACAACTGATATTGTCAGTTC
ATTCTATGGTCTGCATGCTTCTGGGAAGCAAACTTATACCATTATTCGTG
TTGTGGTTGATTATCTCATGTTTATGTTTGCAGCACTAGTTCTATGTTAT
TGCATAATCAAGTTAACTAAGCTGCAAACAGCCAAGCTGACCTTGGATGG
ACAGTTAACTAAGCTGCAAACAGCCAAGCTGACCTTGGATGGACAGGGTG
TTTCCTACTGTCAAGCAGTCACAACATGTACTATCATTGCCCTGCTATAC
ATCAGCAGAGCATTTTACAACATCTTAGCTGTTTCACCCATACATCTTCC
AACTTTTGGTTATGGTTGGATAAATGTCTCAGACCAGGGTGTTTCCTACT
GTCAAGCAGTCACAACATGTACTATCATTGCCCTGCTATACATCAGCAGA
GCATTTTACAACATCTTAGCTGTTTCACCCATACATCTTCCAACTTTTGG
TTATGGTTGGATAAATGTCTCAGACCAGgGGGAAGAAGGACAAGATGGCT
ATGTGAAGGAAACTACAGAGGATTATGCATTTATTTCTTTTGGATGTGTG
TTATTTGTCTGGGAGCTTCTCCCAACATTTACTATCGTTTGGTTTTTCAG
GGTCAGACAGCCTGAAGGCAGACTGgGGGAAGAAGGACAAGATGGCTATG
TGAAGGAAACTACAGAGGATTATGCATTTATTTCTTTTGGATGTGTGTTA
TTTGTCTGGGAGCTTCTCCCAACATTTACTATCGTTTGGTTTTTCAGGGT
CAGACAGCCTGAAGGCAGACTGACTTCAAGTGGGTCAAAATCGGATAGTT
ATCATGCAAAGATTTATTTCTTTGACAATCCTAATCGTTATGATTCAGAT
GATGATATGGCTGTGCCTTACACACCACCTTCACACACTGGACTTCAAGT
GGGTCAAAATCGGATAGTTATCATGCAAAGATTTATTTCTTTGACAATCC
TAATCGTTATGATTCAGATGATGATATGGCTGTGCCTTACACACCACCTT
CACACACTGGgcTTCTCGGTGCGCACTCATTTGGGGCTCGTGGAAGTTCA
CCTCAAAACTCTTATCCAAACCGGAAAATTGTTTCCTCATATGGATCAGT
GCCACCATACACAGGAAGTTATAACCAATCTGTTGAAAGTACGCAAAGTC
CACTTATCCGTGGAACAACACCACCTCTTCTTTTTCCAAGGACATCTCTT
GGGCACACGCAACAATCACCAACTTCAATACTCAGACATCATCATACCAA
AGACACTCAATCACCAGTACCTTAAgcTTCTCGGTGCGCACTCATTTGGG
GCTCGTGGAAGTTCACCTCAAAACTCTTATCCAAACCGGAAAATTGTTTC
CTCATATGGATCAGTGCCACCATACACAGGAAGTTATAACCAATCTGTTG
AAAGTACGCAAAGTCCACTTATCCGTGGAACAACACCACCTCTTCTTTTT
CCAAGGACATCTCTTGGGCACACGCAACAATCACCAACTTCAATACTCAG
ACATCATCATACCAAAGACACTCAATCACCAGTACCTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000066_pilon | genome | sc0000066_pilon:803441..806588 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 700-963:2885 |
| Aaloc | 580-696:2332 |
| Aaloc | 433-579:1641 |
| Aaloc | 292-432:1257 |
| Aaloc | 250-291:1032 |
| Aaloc | 73-249:443 |
| Aaloc | 19-69:1 |
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