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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000398_pilon:189558..193902+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_030194 ID=XLOC_030194|Name=XLOC_030194|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4345bp|location=Sequence derived from alignment at sc0000398_pilon:189558..193902+ (Clytia hemisphaerica_ch_hm2_pilon)
CACCCTGATGTGGAGAACGACGGTGTTCTTCCAGCGAAAGTAAAAAGAGT
CAAGTCGTTGCAACCGAAAACTTTCGAAGAAGATGTCAATAACAGTGCAA
GTAAGCGTCTTGATATCACACAATGTTTATGTTGTAATTTGGGAGTGGAA
GTTTCTTGATAATTGTGtttttttGTATGTAAGACTCTTTGAACAACACT
ACTGAATTAATATTTCCAAGAATGCATTATTGCGACAAAGCTCGAAATTC
GTGATTCACTTTATTCACTGTTcatcttttcagaaaaagaagatagaaaa
agaaaaaggttgaaaaagttgaataaagaCTATGGCACACCAACAGGTAC
cgttaaaaatcttttttattttccttgaagaatactATATCTTTTTGCTC
TTTTAGAATACCCTTGCACATGCGAAGTTGATGATTCTGAAACATGAgat
gaagatattttaaattaaattgaaattcgcTCTGCTTATTTGTTGTTATT
GAGCACTTTATTGACAAGTTGGTTTAATTCTTCATTACTAACTCTGaaac
atacaaaatttttcttttagatcAAGTAATATGTCTTGACAGCCAGGAAT
ACATCAAAAGCTCAGTAAGTGTGTGCTCTTTTAATAAGCAATTCTTATTT
TAACAAGAACCATTTTTGATCTGCACCACatttagaatttcaaaagaaag
tcTTTGGTTCCGAGGAGTCAAATGAAAGAAGTAAAGTATGCAACTAATAA
TGATATGTTATTGTTTTAGGATTTGCACAAGCTTTTATCCACACCTTTAA
AGATACCAGACACACCCTGGATAATCAATTACATCAATGGTACAGAAAAC
GAGAGTTCAACAGTATCTCCAGATGGTAAGCAGCGAACTGGGGGAAGGAC
TTCATGGATAAATCCTTCTTGTGTGTATTGTAATATATTAATATAAGTAT
AGTATACAAAGATACTTTAGATGCTAAAAAATGATGTGATGGTTAGATGC
TTATTATGTATATTGTAAGTAGTATAatactcattctatcattccatcat
actatcattctatcatactatcattccatcatactatcataccatcattc
tatcataccatcattctatcataccatcatactatcattctatcattcta
tcataccatcatactatcattctatcgtactatcattccatcatactatc
attctatcatactatcattctatcattcaatcataccatcattctatcat
accatcattctatcattctatcataccatcattctatcataccatcatat
catcattctatcatgccatcattctatcaaaccatcatactatcaaacca
tcatactatcataccatcattctataattctatcattctatcataccatc
attctatcataccatcatatcatcattctatcatgccatcattcccccat
accatcattctatcataccatcattctatcataccatcattctatcatac
catcattctatcattctatcattccatcatactatcattctatcattcta
tcataccatcatcctatcataccatcattctatcataccatcatcctatc
ataccatcatcGCTCTACTATGCGACATTCTATTATACTCTACAAGCTCC
TGTTTTTGATAGAAATTGTACTGGGtgtttcataaaaaagtgaacaaGTT
TGAAGTTAAATTTTGAGCAAAGTTGAAAAGCTATAAATGTAAATTATATT
CTATTGGAAAGCAGAAGGGTTAACTTAAATTTGAGCTATTATACTTTGAA
ATTGCTCAAGgctttcaaaagttattgagaaaaaagaacaaatatcaaat
ttcatttttgaaaaaacggtatttttggcaaaaaagggggtattaaattg
gaattcacaaaaacataataaaaaattgaaatctcctatttatttttatt
gCGGCCTGATATTGATGGAGCTGGCCTATTTAGAAAATATGTGTTGGTCC
AGAAACGCCTTAGTTCAAGATGATTATACTCGAACAAACTCCAAGAAAAT
CCTGAGGCGCTGTTGATGCGTAAATTATGGTATTTGTTCTCCTTATAAAA
CTTGGCATAGCAAGTACAGAAGAGGTTGTTTTCATAAGATAAACATTCAC
GAAACAATCGAATATTTGATAATTaggtgaaaaaacaaccaataatCTTA
CAAGATTTTAATGGCATAAATAATAAAAGGTGAAACTAACTTTAAATGCT
TTTAAAACAACATAAACTTTTATTATTGAGAGAAAGAGAGGAGATAAttt
gaaaccccttttttgccaaaaatgacgtgttttttaaaatgaaatttttc
gttgtttcttaatatcttttGAACGCTTGGagcaaatttaatgtatgata
gctcaaaatttaagttaatctTTACtctttccaataaaaaagaatttacg
CTGGTAGCATTTCTAGTTCTTTCATAACTTAATGTCAAACTTGTTCTCTT
TTTTATGAAACACCCGGTATTTTCCTTGAGGATTTGTTtactcttttatt
ttgtttctaacATGTGAAGCAGAATTATAATTCGACCTGTCGATTTTTCT
GTCTTCGAAGTAgaatcttttccttaaaactttcaaaataaaaaaaaaaa
tttatgatcaCTTCGGAGACGAATTCTAGAAACTTTTATATTATGTTTTA
GATCAAATGTCACCTAGCGTCAAAAAACCTAAAGGTATGCGTTACATTCA
TAGACAGCATATTGTGTCGAAGAGCCTTTTTCGGGCCAAGATTAAAACTA
TTACTTGAATGGGATAAAATTCTGCGGGGATTAGATTTCGTGGTCGAGCT
CATCcgtgaaattttaagatttcgtgggGATTAGATTTTACAGATGAGGG
GTTTCTTGATTTTGCGTTGGAATTTAAGTTCTCAGATCGgggtacaatca
tggtcgatctattgagaatttagcttatatttcctcgtttttctaaattt
tgagtTCGGACGAGAAAGTCACtgttgggctaattgataaatctattcca
gtatttcaattcgggaggggttaatagacttccaggctatattctgagcc
ttattggaccctTCTTGAACTTTAGTCTTCAGTCTagcattaaaactcag
agttaaaactctacccttccaacctaatttagagcgcttccaaatcgctt
gtggttataagatttcgtaggaatttcccttttctctcaaatattacgac
cacgATTGTAGAATGGAAGttttttaaaagggccgaaactttgaaatgaa
aaatttccaggaaaatggagaaaacttttttcaaatcgaATAATAAGAGT
CATCCTTTCTGAAATGGAGCGAAATAtgtgtaattttttaaaaattgtta
cctttaaccggggggggggggggtagaccTGCTGTTTGGGGGTCAAGACT
CACAATGTTCGGAGGGTTaatttctaaaagtttttttaaatcctcCAGCt
tccatattcaaatttttcctggaaaagcTGGTATAGAGAAACTTGGTGGA
ATCCTCCCattgaagcaaaaaaattcaagggAGACAACTCCCAAATTCAT
TTTTCGATTACGacattattttttcgaaaaagtctttttttttggaaaac
atgtACGTATTATATACCAACAGCAAAAAAGGAACTTTAATTCTGAACAA
CATTTTTCCTTTCACAAAGTcgtaaaaaatgaaacaaataaatCTTATGG
GTTCGTAGTACTATTTGTACCATTTGTTGGTATATAATACGTACATGTTT
TCCATTACTTAATGCAGGATTAGTTCAACACATTATCACATCAAAATCTA
CTAAATCTGTACAAatgtaaaaatacaaaatctacTCATGTTGTAGAATT
ACGGAACTTTGATATCTACTTAGATTTTACTATGCACATGCGTAGACTTT
CGTTCTATAAACCATTAGTCGTTATTACCCGCCAAATACAAAAGGAAATG
TGATGTTGAAGCTTAAAgtcttaaaaaaatattctaaattgACGTTAGAA
AAATAATCACCAATCGTCTAACGTTAcaaaactttttcgaaaaaatactA
ACGTcgtaaagaaatgaaaatttatttttggaggTGGCTCCCTTGAAAAG
GTTCTTTAAGGAATAACTCCACCAAATTTCGGACCTCTATACCAATTTGA
AGTATCCTTATGAATTTCTGTTGTAAGAGCCTTGAATACCCATGCAAAAT
AGTGTTGtacaaaaaagaaattcgataccgttttcaatcaaaattcaatc
ttttcttttctaggtCCTGCTGACAAACTGATGgatgatttttag Coding sequence (CDS) from alignment at sc0000398_pilon:189558..193902+ >XLOC_030194 ID=XLOC_030194|Name=XLOC_030194|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=756bp|location=Sequence derived from alignment at sc0000398_pilon:189558..193902+ (Clytia hemisphaerica_ch_hm2_pilon)
CACCCTGATGTGGAGAACGACGGTGTTCTTCCAGCGAAAGTAAAAAGAGT
CAAGTCGTTGCAACCGAAAACTTTCGAAGAAGATGTCAATAACAGTGCAA
CACCCTGATGTGGAGAACGACGGTGTTCTTCCAGCGAAAGTAAAAAGAGT
CAAGTCGTTGCAACCGAAAACTTTCGAAGAAGATGTCAATAACAGTGCAA
aaaaagaagatagaaaaagaaaaaggttgaaaaagttgaataaagaCTAT
GGCACACCAACAGaaaaagaagatagaaaaagaaaaaggttgaaaaagtt
gaataaagaCTATGGCACACCAACAGatcAAGTAATATGTCTTGACAGCC
AGGAATACATCAAAAGCTCAatcAAGTAATATGTCTTGACAGCCAGGAAT
ACATCAAAAGCTCAGATTTGCACAAGCTTTTATCCACACCTTTAAAGATA
CCAGACACACCCTGGATAATCAATTACATCAATGGTACAGAAAACGAGAG
TTCAACAGTATCTCCAGATGGATTTGCACAAGCTTTTATCCACACCTTTA
AAGATACCAGACACACCCTGGATAATCAATTACATCAATGGTACAGAAAA
CGAGAGTTCAACAGTATCTCCAGATGATCAAATGTCACCTAGCGTCAAAA
AACCTAAAGATCAAATGTCACCTAGCGTCAAAAAACCTAAAGgtCCTGCT
GACAAACTGATGgatgatttttaggtCCTGCTGACAAACTGATGgatgat
ttttag
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000398_pilon | genome | sc0000398_pilon:189558..193902 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 352-381:4316 |
| Aaloc | 319-348:2704 |
| Aaloc | 211-315:770 |
| Aaloc | 169-210:573 |
| Aaloc | 106-165:286 |
| Aaloc | 4-102:1 |
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