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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000351_pilon:191090..194254+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_030128 ID=XLOC_030128|Name=XLOC_030128|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3165bp|location=Sequence derived from alignment at sc0000351_pilon:191090..194254+ (Clytia hemisphaerica_ch_hm2_pilon)
atgacagaaacaATTTCTGATTTTATGTTGGAATGTGAACTAGACGGAAT
CCCCAAACTTCTTTCATTAGAAGATCTTTTATTAGATGAATGTGATGAGT
ATAAAAGATGTTTGCTGTCGACGAAGTTGAAGGATCAACAGCtccaaaaa
atggtcaaattcaTCTTGAAGACGCGCTCTTACCAAGCTTGCTTTTTCCA
AGATGAGAACACTGATAGCCTCGATCTCATTAAAACGAAAGCTCCTATCA
GTTATTTGATGTTCCCCATAGCAACGAAAGCTATCAAAACAGGGAGCCGT
TCAGAACAAGTCTTCTTGCAAGACTCTGATGTTGATTACATTTATGAGAT
TGGTCCTCTGCTGGTGGACGATATTAGCCTACTGAATGAAACCATAAAAT
CGCGAAAGCATAGCCTATGGtacaaagaaacaaagaatGCTGGGTTTTAC
ACCGTCATAGATGACGAGGGTGGACATATAACAGCAGTTGCAATGCAAGC
TAAAATTGATTCGTCCGCAAAGTCAATAAAGTTGGTAAGTAAGCCGGATA
AAACCTTAATGATGATCTAAAATACCAGCCATCTAAACACATTcgaattt
tgtttgattttttttaagttgaCCAACATCTCTGAGTGTTAGTTAGTCTG
AAATTTGGTACGTGGCAAATCATGCAATTTTCACCCTATTAAAAtagttt
tcaagttttcttttttctttttcagctttCAGAACGTAAGGAAGTTTCAG
CAGTTTTAACCACCAACCAAAACGCTGAAGATGATAAGGATGACGATTCA
CTTGGTGAAGATAGGGTCATTGCTTTACCTTTGAAAAAATGGCCTCGACC
TGCTTGGAAGTCATTTAGCGAAAGAAAGCCTGTTTATTTGCAAAGCATAA
TGGATAAATTAGAAGGTAAGTAGTTCAATCCTCTCTGATTTCATtgttcg
attttggaaaaaatactagaaATTGTTTTTAGATCTTTAAATCGAAGAGT
TGTTTTGTTAAGATGttaaaaatatgataaatatGGTTGGTTATCGCCAA
CACCTATCCATTGGAATACAattggagtctctttaactcgaacctctaca
actcaaatgtctctttaactcgagcaagttttcttgtcccttcagttaac
aatgtcttataatCCGTTAtcaataactcgaaatttcctcgataactcga
acaaatttgtggatcCAATGCGGATTTgagttatgaagactccacTTTAT
TTTTAATTAGCACGGAAAGAGGAATAGGGTGATGAATTCAACATCTCATC
ATTGGATATTATAATGATTAATCTTTTTCATATTCTTTGTTATCATTATA
GAGGCTACCATTTATCTGGTCCCCAAAGCACATCCTGACAGTGATGATTG
TTGGATTGAATGGagattatcattttcaatggtGGAGAAAGAAATCATGC
TTAACTTGCCCCACTTGTACCGGAAAGTCTATCTCATCTGCAAGGAGATG
GCGAATGATTTGAAAGTCAAGAATGTGTATTACTCATACGCTTTGAAAAC
CACTTTCTTGTGGCAATGTGAGGCGTGGTCCAAAACAGGCATTGTATACA
CATTAGACCACATCTTAGATATGGTACAGGACGTCTTTCAGCGTCTTTAC
AAAGCTCATGAAACGAAAGACCTCCAAAATTACTTTGTTCCCGGTATGAA
CTTATTTGAACTGATCTCAGATTCGAAGAAGGAATCTGTAGCCTTGAAAA
GGAAGTTTTATTGGTACCAACTGGGCCACGACGGAGACGATAGCACCTTA
CAGAATGATGTATTAGTGAAAGCAGACAAACATCTATTGAACTTACTGAA
GATATACACAGAGAAGAAATCCCTCATTACgaaaatcttacaaaaattCC
AAGTACCTTTCTTTCCCATTGTTTACCAACAACTTGTAACATCAATTAAA
GATGACCTTGATATTCAACGTGGTGTAGTCATGTGGGACCATCAACCAGA
ATATGACGGCTTGAATGCAATCCTTAAGAAATATCACCCATCACATTACA
ACCTGTACAATCTTTCTGTTGACATCTCGCACCAAGATCCTGACATGTTA
AACCATGAATGGAATGAGCGCATCCTGACAGAGTTGTACATCACTTTTCT
TCTGCTGCTTTCCATAACAAGCTTGCAGCCTCGCACAGGTTGTAAAGAAT
ATTTGATGTATGTCTTATACAATATAAGCATCTTTTGGAGAGAGAATCGT
CTGAGTAGAAGCCAACAAAACACAGGAGCAGGATCAACTATTTTTCAGGG
AACTGAAGAAGAAGCTTTCGtcaaaattcttgaatattACAAGTCCTTGG
CTGTCTATTTCTTTGGTGAAAAAGAATGGCTATTACAAACACCTGATGCT
TCAGGTTACACAGACCCTCTTCCTGATTTCTTCCATCACAAGCAGGATCC
TTACATGTCCTTCTTGAATCAGGAACTTTCTAAATCCTTCGATTCAGATA
TGATGACACCTGATGATCTTGAAAAATGTTGGCTCACTGGAAGCTTGGAT
GAAGAGATGtttcagatgacgtcatcaaaagaaGAATTGCTCAAGAAGCA
ATATGTtgaaaaattcgatgaaaaccTCAAAAAGAAACGCCTTCGTAAAA
GCAAAATCCTTTCCTTTGGAAATGCTGAAGGATGCAGAAAGGTGCATGAC
AAAGTTTCGAAATATCCTTTCTACCAGCAGGATGCAGACTTTCAACTATT
GGTGAATCAATTGAACATCAACTGGCAACGAAATCTTCGTCAACGGCTTT
CGAAGGAGAAAGAAATTCAGGAGAAAGATGATAGCAATGAAGAACCTCTT
TTCAATCTAAGCCAAAAATATCCGTACAGTTTCCTCATGAAATGTCTTTT
ACCGCAAATGTGTGAGATGTATAACTATGGATTCACCAGCAATAAATTCG
ATTTTCCGACACCAGCTAAATATCTATCTTTTATTATGCAATTCCACACG
AATGCGATGGAGTATGATTATCAAACTCGCCAAGCATCTAAAGAAGAGTC
CAAGCGTCTACAAAAATGGGGTTATTGCGTTCCCGAGGATGACGGCGTGG
TTTTACGTACTTACGATAAACGCTTGCATAACACCTTTCTGCATTCGTAT
GACTCAGTAATTTGA Coding sequence (CDS) from alignment at sc0000351_pilon:191090..194254+ >XLOC_030128 ID=XLOC_030128|Name=XLOC_030128|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5076bp|location=Sequence derived from alignment at sc0000351_pilon:191090..194254+ (Clytia hemisphaerica_ch_hm2_pilon)
atgacagaaacaATTTCTGATTTTATGTTGGAATGTGAACTAGACGGAAT
CCCCAAACTTCTTTCATTAGAAGATCTTTTATTAGATGAATGTGATGAGT
ATAAAAGATGTTTGCTGTCGACGAAGTTGAAGGATCAACAGCtccaaaaa
atggtcaaattcaTCTTGAAGACGCGCTCTTACCAAGCTTGCTTTTTCCA
AGATGAGAACACTGATAGCCTCGATCTCATTAAAACGAAAGCTCCTATCA
GTTATTTGATGTTCCCCATAGCAACGAAAGCTATCAAAACAGGGAGCCGT
TCAGAACAAGTCTTCTTGCAAGACTCTGATGTTGATTACATTTATGAGAT
TGGTCCTCTGCTGGTGGACGATATTAGCCTACTGAATGAAACCATAAAAT
CGCGAAAGCATAGCCTATGGtacaaagaaacaaagaatGCTGGGTTTTAC
ACCGTCATAGATGACGAGGGTGGACATATAACAGCAGTTGCAATGCAAGC
TAAAATTGATTCGTCCGCAAAGTCAATAAAGTTGatgacagaaacaATTT
CTGATTTTATGTTGGAATGTGAACTAGACGGAATCCCCAAACTTCTTTCA
TTAGAAGATCTTTTATTAGATGAATGTGATGAGTATAAAAGATGTTTGCT
GTCGACGAAGTTGAAGGATCAACAGCtccaaaaaatggtcaaattcaTCT
TGAAGACGCGCTCTTACCAAGCTTGCTTTTTCCAAGATGAGAACACTGAT
AGCCTCGATCTCATTAAAACGAAAGCTCCTATCAGTTATTTGATGTTCCC
CATAGCAACGAAAGCTATCAAAACAGGGAGCCGTTCAGAACAAGTCTTCT
TGCAAGACTCTGATGTTGATTACATTTATGAGATTGGTCCTCTGCTGGTG
GACGATATTAGCCTACTGAATGAAACCATAAAATCGCGAAAGCATAGCCT
ATGGtacaaagaaacaaagaatGCTGGGTTTTACACCGTCATAGATGACG
AGGGTGGACATATAACAGCAGTTGCAATGCAAGCTAAAATTGATTCGTCC
GCAAAGTCAATAAAGTTGctttCAGAACGTAAGGAAGTTTCAGCAGTTTT
AACCACCAACCAAAACGCTGAAGATGATAAGGATGACGATTCACTTGGTG
AAGATAGGGTCATTGCTTTACCTTTGAAAAAATGGCCTCGACCTGCTTGG
AAGTCATTTAGCGAAAGAAAGCCTGTTTATTTGCAAAGCATAATGGATAA
ATTAGAAGctttCAGAACGTAAGGAAGTTTCAGCAGTTTTAACCACCAAC
CAAAACGCTGAAGATGATAAGGATGACGATTCACTTGGTGAAGATAGGGT
CATTGCTTTACCTTTGAAAAAATGGCCTCGACCTGCTTGGAAGTCATTTA
GCGAAAGAAAGCCTGTTTATTTGCAAAGCATAATGGATAAATTAGAAGAG
GCTACCATTTATCTGGTCCCCAAAGCACATCCTGACAGTGATGATTGTTG
GATTGAATGGagattatcattttcaatggtGGAGAAAGAAATCATGCTTA
ACTTGCCCCACTTGTACCGGAAAGTCTATCTCATCTGCAAGGAGATGGCG
AATGATTTGAAAGTCAAGAATGTGTATTACTCATACGCTTTGAAAACCAC
TTTCTTGTGGCAATGTGAGGCGTGGTCCAAAACAGGCATTGTATACACAT
TAGACCACATCTTAGATATGGTACAGGACGTCTTTCAGCGTCTTTACAAA
GCTCATGAAACGAAAGACCTCCAAAATTACTTTGTTCCCGGTATGAACTT
ATTTGAACTGATCTCAGATTCGAAGAAGGAATCTGTAGCCTTGAAAAGGA
AGTTTTATTGGTACCAACTGGGCCACGACGGAGACGATAGCACCTTACAG
AATGATGTATTAGTGAAAGCAGACAAACATCTATTGAACTTACTGAAGAT
ATACACAGAGAAGAAATCCCTCATTACgaaaatcttacaaaaattCCAAG
TACCTTTCTTTCCCATTGTTTACCAACAACTTGTAACATCAATTAAAGAT
GACCTTGATATTCAACGTGGTGTAGTCATGTGGGACCATCAACCAGAATA
TGACGGCTTGAATGCAATCCTTAAGAAATATCACCCATCACATTACAACC
TGTACAATCTTTCTGTTGACATCTCGCACCAAGATCCTGACATGTTAAAC
CATGAATGGAATGAGCGCATCCTGACAGAGTTGTACATCACTTTTCTTCT
GCTGCTTTCCATAACAAGCTTGCAGCCTCGCACAGGTTGTAAAGAATATT
TGATGTATGTCTTATACAATATAAGCATCTTTTGGAGAGAGAATCGTCTG
AGTAGAAGCCAACAAAACACAGGAGCAGGATCAACTATTTTTCAGGGAAC
TGAAGAAGAAGCTTTCGtcaaaattcttgaatattACAAGTCCTTGGCTG
TCTATTTCTTTGGTGAAAAAGAATGGCTATTACAAACACCTGATGCTTCA
GGTTACACAGACCCTCTTCCTGATTTCTTCCATCACAAGCAGGATCCTTA
CATGTCCTTCTTGAATCAGGAACTTTCTAAATCCTTCGATTCAGATATGA
TGACACCTGATGATCTTGAAAAATGTTGGCTCACTGGAAGCTTGGATGAA
GAGATGtttcagatgacgtcatcaaaagaaGAATTGCTCAAGAAGCAATA
TGTtgaaaaattcgatgaaaaccTCAAAAAGAAACGCCTTCGTAAAAGCA
AAATCCTTTCCTTTGGAAATGCTGAAGGATGCAGAAAGGTGCATGACAAA
GTTTCGAAATATCCTTTCTACCAGCAGGATGCAGACTTTCAACTATTGGT
GAATCAATTGAACATCAACTGGCAACGAAATCTTCGTCAACGGCTTTCGA
AGGAGAAAGAAATTCAGGAGAAAGATGATAGCAATGAAGAACCTCTTTTC
AATCTAAGCCAAAAATATCCGTACAGTTTCCTCATGAAATGTCTTTTACC
GCAAATGTGTGAGATGTATAACTATGGATTCACCAGCAATAAATTCGATT
TTCCGACACCAGCTAAATATCTATCTTTTATTATGCAATTCCACACGAAT
GCGATGGAGTATGATTATCAAACTCGCCAAGCATCTAAAGAAGAGTCCAA
GCGTCTACAAAAATGGGGTTATTGCGTTCCCGAGGATGACGGCGTGGTTT
TACGTACTTACGATAAACGCTTGCATAACACCTTTCTGCATTCGTATGAC
TCAGTAATTTGAAGGCTACCATTTATCTGGTCCCCAAAGCACATCCTGAC
AGTGATGATTGTTGGATTGAATGGagattatcattttcaatggtGGAGAA
AGAAATCATGCTTAACTTGCCCCACTTGTACCGGAAAGTCTATCTCATCT
GCAAGGAGATGGCGAATGATTTGAAAGTCAAGAATGTGTATTACTCATAC
GCTTTGAAAACCACTTTCTTGTGGCAATGTGAGGCGTGGTCCAAAACAGG
CATTGTATACACATTAGACCACATCTTAGATATGGTACAGGACGTCTTTC
AGCGTCTTTACAAAGCTCATGAAACGAAAGACCTCCAAAATTACTTTGTT
CCCGGTATGAACTTATTTGAACTGATCTCAGATTCGAAGAAGGAATCTGT
AGCCTTGAAAAGGAAGTTTTATTGGTACCAACTGGGCCACGACGGAGACG
ATAGCACCTTACAGAATGATGTATTAGTGAAAGCAGACAAACATCTATTG
AACTTACTGAAGATATACACAGAGAAGAAATCCCTCATTACgaaaatctt
acaaaaattCCAAGTACCTTTCTTTCCCATTGTTTACCAACAACTTGTAA
CATCAATTAAAGATGACCTTGATATTCAACGTGGTGTAGTCATGTGGGAC
CATCAACCAGAATATGACGGCTTGAATGCAATCCTTAAGAAATATCACCC
ATCACATTACAACCTGTACAATCTTTCTGTTGACATCTCGCACCAAGATC
CTGACATGTTAAACCATGAATGGAATGAGCGCATCCTGACAGAGTTGTAC
ATCACTTTTCTTCTGCTGCTTTCCATAACAAGCTTGCAGCCTCGCACAGG
TTGTAAAGAATATTTGATGTATGTCTTATACAATATAAGCATCTTTTGGA
GAGAGAATCGTCTGAGTAGAAGCCAACAAAACACAGGAGCAGGATCAACT
ATTTTTCAGGGAACTGAAGAAGAAGCTTTCGtcaaaattcttgaatattA
CAAGTCCTTGGCTGTCTATTTCTTTGGTGAAAAAGAATGGCTATTACAAA
CACCTGATGCTTCAGGTTACACAGACCCTCTTCCTGATTTCTTCCATCAC
AAGCAGGATCCTTACATGTCCTTCTTGAATCAGGAACTTTCTAAATCCTT
CGATTCAGATATGATGACACCTGATGATCTTGAAAAATGTTGGCTCACTG
GAAGCTTGGATGAAGAGATGtttcagatgacgtcatcaaaagaaGAATTG
CTCAAGAAGCAATATGTtgaaaaattcgatgaaaaccTCAAAAAGAAACG
CCTTCGTAAAAGCAAAATCCTTTCCTTTGGAAATGCTGAAGGATGCAGAA
AGGTGCATGACAAAGTTTCGAAATATCCTTTCTACCAGCAGGATGCAGAC
TTTCAACTATTGGTGAATCAATTGAACATCAACTGGCAACGAAATCTTCG
TCAACGGCTTTCGAAGGAGAAAGAAATTCAGGAGAAAGATGATAGCAATG
AAGAACCTCTTTTCAATCTAAGCCAAAAATATCCGTACAGTTTCCTCATG
AAATGTCTTTTACCGCAAATGTGTGAGATGTATAACTATGGATTCACCAG
CAATAAATTCGATTTTCCGACACCAGCTAAATATCTATCTTTTATTATGC
AATTCCACACGAATGCGATGGAGTATGATTATCAAACTCGCCAAGCATCT
AAAGAAGAGTCCAAGCGTCTACAAAAATGGGGTTATTGCGTTCCCGAGGA
TGACGGCGTGGTTTTACGTACTTACGATAAACGCTTGCATAACACCTTTC
TGCATTCGTATGACTCAGTAATTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000351_pilon | genome | sc0000351_pilon:191090..194254 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 727-2538:1354 |
| Aaloc | 535-723:726 |
| Aaloc | 1-534:1 |
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