XLOC_029903.6 (mRNA) -

Overview
NameXLOC_029903.6
Unique NameXLOC_029903.6
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000287_pilon:291199..292137+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_029903.6 ID=XLOC_029903.6|Name=XLOC_029903.6|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=939bp|location=Sequence derived from alignment at sc0000287_pilon:291199..292137+ (Clytia hemisphaerica_ch_hm2_pilon)
TTCCCAGGAGCCAGCTCAACGACAGGTAAACATCAAGATGGAAGATGCCA ACATGATTTCATCTGTCCACATCCCACACATCATCAAGATCCAATCAAGA AGCACGTCCTACTCTGCGAAGATCACAAAGCCTTACCATCAAATCAACAA CTGCTCAAGAGGTATGTAGATCGTTTCATCAAAAGCCCAAAACTACCAGC TTTTGCTCGTCAAATTCACCTCTACAAAGCTTCCAACAATGATTGCAATG AGAGAGGCATCTACCTTCTACAGAAAATTCGCGTCAATGGCAAAGACCTC GTCATATTCTTCGACAATGGATGTAGTGATTTTGTCGTTAGTCACGAAGC CATCAAACTACTTGGACCATTTGCAGAACAACTATCATCTGAACCAATCA GCATTGGTGGTGTCGGTCAAACACAAGCACAATCAACACTTGGCACCTAT CGCGTCAAGATTCCACTCCACGATGGTACTGAAGTCTCACTCATTGGGGC TTGCCTTGAGAAAATCACTGAAACATTTCCGATGTATCCATTGGACCAAG TTGAACGAGATATCAATCATCAGTACAGCTTATCAAATCAATCTGGCAAC CTTCCAAAGCTTGCACCATCCATCGGTGGAGATGTTCATCTAATGATCGG TGTCAAACATCTTTCACTTCAtcccattatgaaatttcaacTTGAATCTG GACTTGCCATCTACGaatccaaatttttcaattcttctggTGGACGAGGA CTCGTTGGTGGACCTCACCCAACCTTCACAGCCATTCATCAAAACTTCCT GTCATCATCAATGACAACCTTCTTCACAGATCAGTTCATCAGAATCCGCA GTCGACCAGATTCACCTCTTCTTGGATTCAAACCAACACATCCAGCTCAA CCAATCAACACTGAAGTTCACCTGTCAACAGCAATGCGA

Coding sequence (CDS) from alignment at sc0000287_pilon:291199..292137+

>XLOC_029903.6 ID=XLOC_029903.6|Name=XLOC_029903.6|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1878bp|location=Sequence derived from alignment at sc0000287_pilon:291199..292137+ (Clytia hemisphaerica_ch_hm2_pilon)
TTCCCAGGAGCCAGCTCAACGACAGGTAAACATCAAGATGGAAGATGCCA
ACATGATTTCATCTGTCCACATCCCACACATCATCAAGATCCAATCAAGA
AGCACGTCCTACTCTGCGAAGATCACAAAGCCTTACCATCAAATCAACAA
CTGCTCAAGAGGTATGTAGATCGTTTCATCAAAAGCCCAAAACTACCAGC
TTTTGCTCGTCAAATTCACCTCTACAAAGCTTCCAACAATGATTGCAATG
AGAGAGGCATCTACCTTCTACAGAAAATTCGCGTCAATGGCAAAGACCTC
GTCATATTCTTCGACAATGGATGTAGTGATTTTGTCGTTAGTCACGAAGC
CATCAAACTACTTGGACCATTTGCAGAACAACTATCATCTGAACCAATCA
GCATTGGTGGTGTCGGTCAAACACAAGCACAATCAACACTTGGCACCTAT
CGCGTCAAGATTCCACTCCACGATGGTACTGAAGTCTCACTCATTGGGGC
TTGCCTTGAGAAAATCACTGAAACATTTCCGATGTATCCATTGGACCAAG
TTGAACGAGATATCAATCATCAGTACAGCTTATCAAATCAATCTGGCAAC
CTTCCAAAGCTTGCACCATCCATCGGTGGAGATGTTCATCTAATGATCGG
TGTCAAACATCTTTCACTTCAtcccattatgaaatttcaacTTGAATCTG
GACTTGCCATCTACGaatccaaatttttcaattcttctggTGGACGAGGA
CTCGTTGGTGGACCTCACCCAACCTTCACAGCCATTCATCAAAACTTCCT
GTCATCATCAATGACAACCTTCTTCACAGATCAGTTCATCAGAATCCGCA
GTCGACCAGATTCACCTCTTCTTGGATTCAAACCAACACATCCAGCTCAA
CCAATCAACACTGAAGTTCACCTGTCAACAGCAATGCGATTCCCAGGAGC
CAGCTCAACGACAGGTAAACATCAAGATGGAAGATGCCAACATGATTTCA
TCTGTCCACATCCCACACATCATCAAGATCCAATCAAGAAGCACGTCCTA
CTCTGCGAAGATCACAAAGCCTTACCATCAAATCAACAACTGCTCAAGAG
GTATGTAGATCGTTTCATCAAAAGCCCAAAACTACCAGCTTTTGCTCGTC
AAATTCACCTCTACAAAGCTTCCAACAATGATTGCAATGAGAGAGGCATC
TACCTTCTACAGAAAATTCGCGTCAATGGCAAAGACCTCGTCATATTCTT
CGACAATGGATGTAGTGATTTTGTCGTTAGTCACGAAGCCATCAAACTAC
TTGGACCATTTGCAGAACAACTATCATCTGAACCAATCAGCATTGGTGGT
GTCGGTCAAACACAAGCACAATCAACACTTGGCACCTATCGCGTCAAGAT
TCCACTCCACGATGGTACTGAAGTCTCACTCATTGGGGCTTGCCTTGAGA
AAATCACTGAAACATTTCCGATGTATCCATTGGACCAAGTTGAACGAGAT
ATCAATCATCAGTACAGCTTATCAAATCAATCTGGCAACCTTCCAAAGCT
TGCACCATCCATCGGTGGAGATGTTCATCTAATGATCGGTGTCAAACATC
TTTCACTTCAtcccattatgaaatttcaacTTGAATCTGGACTTGCCATC
TACGaatccaaatttttcaattcttctggTGGACGAGGACTCGTTGGTGG
ACCTCACCCAACCTTCACAGCCATTCATCAAAACTTCCTGTCATCATCAA
TGACAACCTTCTTCACAGATCAGTTCATCAGAATCCGCAGTCGACCAGAT
TCACCTCTTCTTGGATTCAAACCAACACATCCAGCTCAACCAATCAACAC
TGAAGTTCACCTGTCAACAGCAATGCGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_029903.6XLOC_029903.6-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000287_pilongenomesc0000287_pilon:291199..292137 +
Properties
Property NameValue
Aaloc70-1008:1