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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000001_pilon:1434407..1439729- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_029802 ID=XLOC_029802|Name=XLOC_029802|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5323bp|location=Sequence derived from alignment at sc0000001_pilon:1434407..1439729- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGCGATTTAGAGGCGATGATACAAAGTCTAAAACCTCTGGCAATAAA
CCCCGATAATTGCACTGTAGATCTGTCCCTGTACGAGCAAATCAATCAAA
ATTCAAATGAGTTCCAAGATCGACAGGCGAAACAGTTCAATCTGGGAAAT
GGCTTAAATTTCGGGAACCCTATCAGTGCAGCTGAATACTTACTAAAGCG
CGAATATGGAGAAACATTCCTTTTCGGAGAGGACTCCTCTAAAGCAATAT
TCATACCCCCGGAATTTATATCAAGTCAATACCTCAAATCTGGCGATTCA
AGTGTAACAGGAATGTTGGATTATAATGTCAAGACAACCCTTGCCACAAC
AAAAGAAAACCTCCTGAAGAATTTGCCAGATTTTTGGTTTACAAAGGAGT
TTGATGCTTTCATGAGAAACAATCAACAACAGAATCAACAATCTACCAGC
ACAGGTAATTCCCATAGTCACAATATTGATCAAACAGCTTTTGACAAGTG
GAGACTCAATGCCAAAATTATGCACCTAGTGATCGAGTTTTTAGGAACAA
GTAATCTGAACCTTCCAGCAACCACCGTTGGAAAGGACTCATTCATCCAA
GGATGTTTATTGGAGCTCAATACATTGCCACCATGTCCAAAAAGACCTAA
TAACAAGCAAAACTTGGTAAAAATTCTCCAAGGTAAAAATGGGAACACCA
AGAAAAACATTATCAAACTCTACAATGAAAATCCACCAACAAACAAAATG
GCAAAAGCAGTTTTAGAGATGGAGTTATCAGACATTGGTGAACAATCAGA
ACATTCATTATTTGAGCAACTTTCCTCAAAAGCAGCAACAAAGATTCTGG
AAAATGCAGTCGTGTTGAGTTCAGTCAACTTCCTGACAGATTTAAACAAC
AAACGTCACCAAGAATTCGATTTTGTCATCATATTTTGGCAACGCAAATT
GATCATTGGAGTGGAGATCAAACGCCAGCTGACAGCAAAAACGGCGGCGT
TTAAACAGCTTAACAAGTATCACAAGCAATTCGAGGAAAGATTAGGTGAC
CAGTTAGTTGATGGTTGGACTTTCTTCCCAACAATATACGTTCAAAATGA
CAACGGTTTAAGCGAAACTCAACATTTCATTAACACAAATACTGATATTC
CAGCCTGGTTATCAAACATCATAAGCGGGTTCCCAATAGCACCATGCCAA
ACACCGTTTATCCATCCCCTGGAACAGCTGAAAAAGGTATTTACGTAATA
TGACTTTGAGCCGAATCAGTACCGCTGAATTGTTAAACTTTCTCATTTTC
GGGGAACCTTTCTTATTGACACTTCACAACGGAAAAAGTCTCTGGGTAGT
ACAAAAGTAGCTTCAACTTATTAGGTGGTCAGTCTTAGATCCATACGCTC
GCATGTTTACGCAACAAAATTTTTTGCTGGCAAGCACGTAAAAAACAGCG
GAAGGTTCCCGGGAATGCAACTGTAATGTTTCCCAGGAAATGAGAAAGTT
TAAACTATCTTTGAAAGAAGTAATTAAAACGAGAATCTTTTATATATAAC
AGGAACAGGAGGGCAAACCATTAGTACCCGTGACATCTTTCATGCGACGA
GACCAAACCTGGTCCATTTCAAAGAATGAGGTTTTCGCGAGGGGGTCTTT
TTGGTAAGGTCTAGGAAAAATTTTAGGACTCAAAAACTGACGTCACAGGC
AAAACCCATTGACCCCTAAAATTTGACAAAATTCAAAAGTCAATAAAACC
CAAAACCAATTAAACGAAAGCTCGAGAAAATTAACGTCAAAATTGACGTT
TTTACGTCATTTCCAATCGATTTACTTGAGTTACGTTGGGAAACAAACTA
ATTAATAAATAAACTAGTTATTAACGTTTAAATTTCGTCAAATTTCAGGG
GTCAAGGGGTTTTGCCCCTGGCGTCAGTTTTTCTAATCAAAAAAATATTT
CCTAGGCCTGAGAACCGAACCCCCCTCGCGAAAATTCTTTTAAATACTTT
ATTCTTTGAAATGGAGCAGGTTTGGTAGAGTTGCATAAAAGATGTCACGG
GTTCTAAAGTCTGTCGCAAAAGTATGTAGACACTTACACTTTAATTTTTG
AGGATTTTCCCAGCATCCATTTATGCTATATTAAAAAGTTATACACCGTT
GGAAAGATATTTCCTAGGAAAATAATCTAAAGGATAAAAGATTTTTGAAA
AATTGAAAAATGAAGAACAGAAATGAAATGAAAAAATAAAGATTTTTCTA
CTTGTTCAAAAATCGTGACATCAGGGTATTTAGAGAATTTAAACCTTGCT
GATTTCAAATCTATGTTCAGATTTTTCGTACCTTTTTTTAAATAAAAAGT
TACACCACTGTGAACTTGGTTGGCGAACTTTTTTTTCCGTTTAAGGCCTA
CTTCAAAGGGCTATATAACTCTTTATCCAAGAAAGATACGCAAAATCTGA
ACACAAGTCTTTTCCTATTCCTGAAAAAATATTTTCACGAGAAGATAAAT
TTTTTTCATTTACGATATCTGTAATTAAGCTCTTCCTCTCATCCCTAGAT
AAGTAAATACCTAAAACCTAATGACAAGGCAAATTAAAAGTAGAAGAATG
TGCGTTTTGTGGTATGTATAATAATACGATTAAAATCAGTTCTTACGTTC
CCTTTTCTGTCAGGTGCTTCAACTTATTGTTTTCACAATTCATGTATCAA
AAAAGAACCTCGCAACACCGATCATTTCATCCAATTGGGTAGACTACGTA
CAGAATGTCATGGACTCCCTATACACAGTGGATAATGTCATCTTTTACTC
AATGCAACAGTTGCCTATTCTGTTCTCTGAAGATACAAAGTACAAGAAAC
TTTTAATAAAGGGTGGCTGGGGGACAGGTAAATCATTTTTGATGATGGAG
AAAGCAAAGTTGTTGAGTAAAGATGCAACGTACAAAGGGAAAGTATTGTA
TGTTATATGGTGGCAAAGGTCTATTCGAGGACCCACAAGCTTCAAGCCGT
TACTTTATTATCAGTTGAAATCAGAGTTGCCGCCAGATATCCACGTCATT
GCAGTATGTATATTAACTCTGTTTTAGTTAGGTATTTAAAATTTAAGGGC
TCTGACTTTAGCGAAGTTATGACTTTTGATAGGTAAGAAATATTACAATT
TCCCCCTGATCTAGAATTGGTCTTTTGTTCTCACTCCATTTTTTCATACC
TCATAAAAACAGTCATGACTCATGTACTCTTAGGTTCCAAATAAACGGGG
GGGGGGGGGGGGTTCGAAAATTTTTGAAATTATATAAACAGGGGGGGCTA
ATTGCCGGGGATGTAAATTTTACTTCTGAAAACATTAAAACAAGGTAAAT
ACAAGTCAATTTTGACCTCTTTTTTAGAAAACCACATAACTTTACAAAAT
ATTAGTTTCTGACAATGAGATTTTCAGGAGTGCCTCAATTTAAGTTGAAG
TTTAGCCATAAGAAATTTGAAGTCGATAACACAATTAAAGCGCTCTACGT
CAAAATTTGAAACTTATGGAAGTTTTTTTTTGGACCACCCGGTATAGGCT
AAAATCAGGCTTTTTAGAGCAAAATAAGGGGGCTTCTCTTTGACAGCTGA
AAAAATTCTTAAAAACTAATAAATGGGGGGGGGGGTCCTAATAAGGTCCA
GGTGGGGGTGTTTATTTGGAACCTAAGAGTATCAAATTGGAAGATTTTTC
AGGAAAATTACAAATAGTGCATTCATTTGTGGATTATAAGTGAAGAAAGT
CATTAAAATTTTCAAAAAAGCACTTTTTGTACAATAAAGATATTTACGTC
TTAATTTTCAATTTCATGGTATTATTTTTGGAATTAAATTTAAATCATTT
TTGACTGATTTTGTTAAAAAAGGAAATTAAAGGGCATTTTTAGTTTGCTA
TTATTCTTATCTTAATATCGAAGGCTAATCTTCAAATAGAAAAATCTATT
TTTTTCTATAGTCAGAGCCCTTAAGGAAATAAGACTAAGACTAAGACATC
ACCTAGACTATAGAAAAAACCGTATACTTATACTTGCCATATTATTGAGT
CTCATTTTATAATAAAACTGTTCTTATAAAAGAAAGGGTATAATAAGAAG
ATATCTTTAAGCACCTTTTTTGTTTTCAGGTTGACAATTTCGAACCCGAA
AACATAGACTTTGAAGAGTACAAGGCGGTGTTTGTGGATGAATGGGAAGT
TGCAAGGTATCCTCATTTACCATTCTCGAATGCCAAATACTTATGGATTG
CACAACGTCCAATACATTTTCGCTATTTTAATCCAATGCATCTTCTCAAT
TCTAAAATTTCCAGATTAAGAGATGACGGCTTCAAAATACTTAACTTGGG
AACCAATCTACGAAACTCGAAAGAAATCGTCAATATGTCCAAAGTAACAT
ACGAGAAAAAGCCTGTAACAACATTATCAGATGTTATAGCGGATCCCCCA
CAAATTTTCCCAAAAGGACCGTCTCCAACATACGTGAATAAAATAAATGA
TGCTATCATTTTGGAACGTAAAAAGTCGAACTTAGAAGGACTTTTGATCA
TAATAAGTAGCTTTGATAAAAATAGAGATATCGACCCTAAAAGTAACGGA
GAGGTCAAATATTTTGATGAATTTTCAGGCAAGGAAAATCCCTATGAGTT
CTTAAGTGATAAAGGGAAAGGAAACATTTTGGTACTCAATGAAGAAAACG
ACGTGTTAGTAGTAATTGATGGGTTTGAATGGACAACCATAATTATTGAT
TCACATCTCGTAAGTGATAATAATCTGTCCATGAGATGTACAACAACTCT
TTACATTGTCGGAGACAAAAATGAAGATGAAAATGATTACGATGAAATAG
ACGGGTTCCCAAAACATGAATTTGTCAAGTTACTTGAAATCACTGGAGAT
GAAGAGTATGATGGTTTACTTTATTACTTCAAAGAATACATAAGAAACTT
CTTTATACTTCGTGAATTGACGAATGAGATAAAGACTTTTTTACCTCTTC
TCATTGAGTGCATACAAAGCATAAACAATATTTCAACGAAGGACGCAACA
GAACATGAGAAGGCTTATTGTTTGTTGAAGTTATCAGAGTTTATAATAAG
TCTTTATTATATATATTTTAGTAATGAAGATAAAAATACTTTCAAAAAAG
ATGATCCCAAAATTTTGGCATTCTTAGAAAGAGATTTGTCTTCACAGGAC
CATATGGACTTAAAATTGGAAGATTGCCGCGAATACATAATGAAGTTAAA
ACCTTTTAAGCCATTATTTGAAGAAGAATTTGATGGTCTATTATCAGAAA
TGGAAAATATTTTAAATAGTTGA Coding sequence (CDS) from alignment at sc0000001_pilon:1434407..1439729- >XLOC_029802 ID=XLOC_029802|Name=XLOC_029802|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5424bp|location=Sequence derived from alignment at sc0000001_pilon:1434407..1439729- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGCGATTTAGAGGCGATGATACAAAGTCTAAAACCTCTGGCAATAAA
CCCCGATAATTGCACTGTAGATCTGTCCCTGTACGAGCAAATCAATCAAA
ATTCAAATGAGTTCCAAGATCGACAGGCGAAACAGTTCAATCTGGGAAAT
GGCTTAAATTTCGGGAACCCTATCAGTGCAGCTGAATACTTACTAAAGCG
CGAATATGGAGAAACATTCCTTTTCGGAGAGGACTCCTCTAAAGCAATAT
TCATACCCCCGGAATTTATATCAAGTCAATACCTCAAATCTGGCGATTCA
AGTGTAACAGGAATGTTGGATTATAATGTCAAGACAACCCTTGCCACAAC
AAAAGAAAACCTCCTGAAGAATTTGCCAGATTTTTGGTTTACAAAGGAGT
TTGATGCTTTCATGAGAAACAATCAACAACAGAATCAACAATCTACCAGC
ACAGGTAATTCCCATAGTCACAATATTGATCAAACAGCTTTTGACAAGTG
GAGACTCAATGCCAAAATTATGCACCTAGTGATCGAGTTTTTAGGAACAA
GTAATCTGAACCTTCCAGCAACCACCGTTGGAAAGGACTCATTCATCCAA
GGATGTTTATTGGAGCTCAATACATTGCCACCATGTCCAAAAAGACCTAA
TAACAAGCAAAACTTGGTAAAAATTCTCCAAGGTAAAAATGGGAACACCA
AGAAAAACATTATCAAACTCTACAATGAAAATCCACCAACAAACAAAATG
GCAAAAGCAGTTTTAGAGATGGAGTTATCAGACATTGGTGAACAATCAGA
ACATTCATTATTTGAGCAACTTTCCTCAAAAGCAGCAACAAAGATTCTGG
AAAATGCAGTCGTGTTGAGTTCAGTCAACTTCCTGACAGATTTAAACAAC
AAACGTCACCAAGAATTCGATTTTGTCATCATATTTTGGCAACGCAAATT
GATCATTGGAGTGGAGATCAAACGCCAGCTGACAGCAAAAACGGCGGCGT
TTAAACAGCTTAACAAGTATCACAAGCAATTCGAGGAAAGATTAGGTGAC
CAGTTAGTTGATGGTTGGACTTTCTTCCCAACAATATACGTTCAAAATGA
CAACGGTTTAAGCGAAACTCAACATTTCATTAACACAAATACTGATATTC
CAGCCTGGTTATCAAACATCATAAGCGGGTTCCCAATAGCACCATGCCAA
ACACCGTTTATCCATCCCCTGGAACAGCTGAAAAAGATGAGCGATTTAGA
GGCGATGATACAAAGTCTAAAACCTCTGGCAATAAACCCCGATAATTGCA
CTGTAGATCTGTCCCTGTACGAGCAAATCAATCAAAATTCAAATGAGTTC
CAAGATCGACAGGCGAAACAGTTCAATCTGGGAAATGGCTTAAATTTCGG
GAACCCTATCAGTGCAGCTGAATACTTACTAAAGCGCGAATATGGAGAAA
CATTCCTTTTCGGAGAGGACTCCTCTAAAGCAATATTCATACCCCCGGAA
TTTATATCAAGTCAATACCTCAAATCTGGCGATTCAAGTGTAACAGGAAT
GTTGGATTATAATGTCAAGACAACCCTTGCCACAACAAAAGAAAACCTCC
TGAAGAATTTGCCAGATTTTTGGTTTACAAAGGAGTTTGATGCTTTCATG
AGAAACAATCAACAACAGAATCAACAATCTACCAGCACAGGTAATTCCCA
TAGTCACAATATTGATCAAACAGCTTTTGACAAGTGGAGACTCAATGCCA
AAATTATGCACCTAGTGATCGAGTTTTTAGGAACAAGTAATCTGAACCTT
CCAGCAACCACCGTTGGAAAGGACTCATTCATCCAAGGATGTTTATTGGA
GCTCAATACATTGCCACCATGTCCAAAAAGACCTAATAACAAGCAAAACT
TGGTAAAAATTCTCCAAGGTAAAAATGGGAACACCAAGAAAAACATTATC
AAACTCTACAATGAAAATCCACCAACAAACAAAATGGCAAAAGCAGTTTT
AGAGATGGAGTTATCAGACATTGGTGAACAATCAGAACATTCATTATTTG
AGCAACTTTCCTCAAAAGCAGCAACAAAGATTCTGGAAAATGCAGTCGTG
TTGAGTTCAGTCAACTTCCTGACAGATTTAAACAACAAACGTCACCAAGA
ATTCGATTTTGTCATCATATTTTGGCAACGCAAATTGATCATTGGAGTGG
AGATCAAACGCCAGCTGACAGCAAAAACGGCGGCGTTTAAACAGCTTAAC
AAGTATCACAAGCAATTCGAGGAAAGATTAGGTGACCAGTTAGTTGATGG
TTGGACTTTCTTCCCAACAATATACGTTCAAAATGACAACGGTTTAAGCG
AAACTCAACATTTCATTAACACAAATACTGATATTCCAGCCTGGTTATCA
AACATCATAAGCGGGTTCCCAATAGCACCATGCCAAACACCGTTTATCCA
TCCCCTGGAACAGCTGAAAAAGGTGCTTCAACTTATTGTTTTCACAATTC
ATGTATCAAAAAAGAACCTCGCAACACCGATCATTTCATCCAATTGGGTA
GACTACGTACAGAATGTCATGGACTCCCTATACACAGTGGATAATGTCAT
CTTTTACTCAATGCAACAGTTGCCTATTCTGTTCTCTGAAGATACAAAGT
ACAAGAAACTTTTAATAAAGGGTGGCTGGGGGACAGGTAAATCATTTTTG
ATGATGGAGAAAGCAAAGTTGTTGAGTAAAGATGCAACGTACAAAGGGAA
AGTATTGTATGTTATATGGTGGCAAAGGTCTATTCGAGGACCCACAAGCT
TCAAGCCGTTACTTTATTATCAGTTGAAATCAGAGTTGCCGCCAGATATC
CACGTCATTGCAGTGCTTCAACTTATTGTTTTCACAATTCATGTATCAAA
AAAGAACCTCGCAACACCGATCATTTCATCCAATTGGGTAGACTACGTAC
AGAATGTCATGGACTCCCTATACACAGTGGATAATGTCATCTTTTACTCA
ATGCAACAGTTGCCTATTCTGTTCTCTGAAGATACAAAGTACAAGAAACT
TTTAATAAAGGGTGGCTGGGGGACAGGTAAATCATTTTTGATGATGGAGA
AAGCAAAGTTGTTGAGTAAAGATGCAACGTACAAAGGGAAAGTATTGTAT
GTTATATGGTGGCAAAGGTCTATTCGAGGACCCACAAGCTTCAAGCCGTT
ACTTTATTATCAGTTGAAATCAGAGTTGCCGCCAGATATCCACGTCATTG
CAGTTGACAATTTCGAACCCGAAAACATAGACTTTGAAGAGTACAAGGCG
GTGTTTGTGGATGAATGGGAAGTTGCAAGGTTGACAATTTCGAACCCGAA
AACATAGACTTTGAAGAGTACAAGGCGGTGTTTGTGGATGAATGGGAAGT
TGCAAGATTAAGAGATGACGGCTTCAAAATACTTAACTTGGGAACCAATC
TACGAAACTCGAAAGAAATCGTCAATATGTCCAAAGTAACATACGAGAAA
AAGCCTGTAACAACATTATCAGATGTTATAGCGGATCCCCCACAAATTTT
CCCAAAAGGACCGTCTCCAACATACGTGAATAAAATAAATGATGCTATCA
TTTTGGAACGTAAAAAGTCGAACTTAGAAGGACTTTTGATCATAATAAGT
AGCTTTGATAAAAATAGAGATATCGACCCTAAAAGTAACGGAGAGGTCAA
ATATTTTGATGAATTTTCAGGCAAGGAAAATCCCTATGAGTTCTTAAGTG
ATAAAGGGAAAGGAAACATTTTGGTACTCAATGAAGAAAACGACGTGTTA
GTAGTAATTGATGGGTTTGAATGGACAACCATAATTATTGATTCACATCT
CGTAAGTGATAATAATCTGTCCATGAGATGTACAACAACTCTTTACATTG
TCGGAGACAAAAATGAAGATGAAAATGATTACGATGAAATAGACGGGTTC
CCAAAACATGAATTTGTCAAGTTACTTGAAATCACTGGAGATGAAGAGTA
TGATGGTTTACTTTATTACTTCAAAGAATACATAAGAAACTTCTTTATAC
TTCGTGAATTGACGAATGAGATAAAGACTTTTTTACCTCTTCTCATTGAG
TGCATACAAAGCATAAACAATATTTCAACGAAGGACGCAACAGAACATGA
GAAGGCTTATTGTTTGTTGAAGTTATCAGAGTTTATAATAAGTCTTTATT
ATATATATTTTAGTAATGAAGATAAAAATACTTTCAAAAAAGATGATCCC
AAAATTTTGGCATTCTTAGAAAGAGATTTGTCTTCACAGGACCATATGGA
CTTAAAATTGGAAGATTGCCGCGAATACATAATGAAGTTAAAACCTTTTA
AGCCATTATTTGAAGAAGAATTTGATGGTCTATTATCAGAAATGGAAAAT
ATTTTAAATAGTTGAATTAAGAGATGACGGCTTCAAAATACTTAACTTGG
GAACCAATCTACGAAACTCGAAAGAAATCGTCAATATGTCCAAAGTAACA
TACGAGAAAAAGCCTGTAACAACATTATCAGATGTTATAGCGGATCCCCC
ACAAATTTTCCCAAAAGGACCGTCTCCAACATACGTGAATAAAATAAATG
ATGCTATCATTTTGGAACGTAAAAAGTCGAACTTAGAAGGACTTTTGATC
ATAATAAGTAGCTTTGATAAAAATAGAGATATCGACCCTAAAAGTAACGG
AGAGGTCAAATATTTTGATGAATTTTCAGGCAAGGAAAATCCCTATGAGT
TCTTAAGTGATAAAGGGAAAGGAAACATTTTGGTACTCAATGAAGAAAAC
GACGTGTTAGTAGTAATTGATGGGTTTGAATGGACAACCATAATTATTGA
TTCACATCTCGTAAGTGATAATAATCTGTCCATGAGATGTACAACAACTC
TTTACATTGTCGGAGACAAAAATGAAGATGAAAATGATTACGATGAAATA
GACGGGTTCCCAAAACATGAATTTGTCAAGTTACTTGAAATCACTGGAGA
TGAAGAGTATGATGGTTTACTTTATTACTTCAAAGAATACATAAGAAACT
TCTTTATACTTCGTGAATTGACGAATGAGATAAAGACTTTTTTACCTCTT
CTCATTGAGTGCATACAAAGCATAAACAATATTTCAACGAAGGACGCAAC
AGAACATGAGAAGGCTTATTGTTTGTTGAAGTTATCAGAGTTTATAATAA
GTCTTTATTATATATATTTTAGTAATGAAGATAAAAATACTTTCAAAAAA
GATGATCCCAAAATTTTGGCATTCTTAGAAAGAGATTTGTCTTCACAGGA
CCATATGGACTTAAAATTGGAAGATTGCCGCGAATACATAATGAAGTTAA
AACCTTTTAAGCCATTATTTGAAGAAGAATTTGATGGTCTATTATCAGAA
ATGGAAAATATTTTAAATAGTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001_pilon | genome | sc0000001_pilon:1434407..1439729 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1705-2712:1009 |
| Aaloc | 1627-1701:1195 |
| Aaloc | 1237-1626:2661 |
| Aaloc | 1-1236:5324 |
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