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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000417_pilon:183487..185544- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_029761 ID=XLOC_029761|Name=XLOC_029761|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2058bp|location=Sequence derived from alignment at sc0000417_pilon:183487..185544- (Clytia hemisphaerica_ch_hm2_pilon)
ACGATTCTTCCCTGTTCATGTAATGATTCCAAATTCAAAGATCCTTTTCA
TAATCACATAATAACAGGTGACTTAACTATCATTGACAATCAAAAATTAC
GTAAACTTTTTTCTCGTGGACCTAAATTTCGTGAACCTAAACAACTAGAT
TTTGAAGCAGCTAAAATGGAAATTTTGAAAGGTGTTGACAAATGCATTAA
ATCCTACTGCGAGCGTTACCATTTAGATGAGGTTGTTCTTAGAGCTTGGA
GAGTGGAAATTGTAAAAGCTATCGACGAGAGAGTACAACAAATTGTTCCC
ACTTTAAAACTTGATCATGTTCTAGAGACATTGAGGGACCCTATTTGTCG
AAAAAGTTTACTAGATTTACAAGAAAGATTTGTTATTGCCCCCATTGACA
AGGCTTCTGGCAATATTTCCTTGATTTGCAAAAGATTTTATGCCGAAGTT
TTGGCAAGGGAATTAGGACTCAATGGCACAGGCTCTGACACTTACAAATC
TGTACGCAAAAAGGATAAAACCATTATTTGTAAACACAAAAAAGACCTTA
AAGATAAATTTGGGATAGAGGTGTCAGTTGGAAATGAAAAACTACCCAAT
ATCTATTGGCTACCAAAAATGCATAAAAACCCTCTGAAATTTCGCTTTAT
CATTGCAGCTCCTAGCTGTTCAGTTAAACAACTTTCCCAGGCAGTAACTT
CAGTTTTTCGTCTCTTTTACAATCAAATTGAAAATTACAACATGAAGTGC
TGTTATTATTCTTCTGTTAAAACATTTTGGGTTATTGAGAACAACCTAGT
CTACACAATAGACAGATCCAGGCTTTTAGGCCTTACTCTTGGTCTATAAG
CACTGCTATAGGCGGCCACTAGTGACCCCCACCGGGAATTGCTTATTAAT
AGGTTTAAACATAATAGACAACATTTAAAAAAGATGTTTATCAATAGAGA
TTTTAAATAAAAGAATGTTTAAAACACAGCTGATTGGCTTAGGTTTCGAA
ACTCTCTATTGTTTCATTAAAACCTCAGTGCGCATGCGATTTATCTGGAG
AATTTCAATATTAAAAACAAGAGCAGTGCTCATAGCCCGAAGAGTAGGAG
TTTTACGCTCGAAACGAAGGAAGATATGACGTAGCCTAAGAACAACCAAG
AAGTATTGAAAAGTTTAAATAAATTGAATAAAAAAGGTAAAGCTAGTTGC
ATTTCCACCTTTGATTTTTCTACTCTGTACACGAAAATCCCTCATGACAA
GTTGTTGTTTGTTCTAAACGAGTTGACTGATGTTTGTTTTAATGGGGGAG
ATCGAGAGCTGTTGTCTGTAACAAAGTCTGGTGCTAGATGGGTGACGCGA
CCATCCCCAAATGGAGTGATATTTACTATAGAGAATCTTTTAAGGAAGCT
GTTATACTTGATGGATAATTGTTTTTTTACTTTTGGAGACCGTGTTTATA
GACAGAAGATTGGTATTCCCATGGGTTCGGATCCAGCTCCATTCATGGCC
AATCTTTTTCTTTATTACTACGAGTCAGCTTATGTCAAAAAGGTAAAAAA
AGAAGATATTTTTATTGCCAGGAAGTTTCGACATACCTTTCGCTTCATAG
ACGATCTTTTGGCCATTAATGATGATGGTGAATTTGAGCGATGCTTTAAA
AATATCTACTACCCTTCTGAATTAGAACTTAAGAAGGAACACGGTGACAC
ACAAGTATCTTTCTTTGACTTAGATATTTCAATACAGGGAAGATTTTTCA
ATACTTCACTATACGACAAGCGTGACAGCTTTCCTTTTTCTATTGTGAGG
ATGCCTTTTAAATGCAGTAACATGCCTTCTAAAATTTTTTATTCCACCAT
TGGTGCAGAAATTTTGAGAATTGGTCGCGCAAGTTCAACATGTGAACCAT
TTATCAAGTCTGCCAAAGCTGTTATCGACAGAATGAAGAATCAAGGTGCC
CATCCACAAAAAATTACAGACATTTTAAAAAGAACTTATGGTAAACATGA
CGATTTGAAAAAATTTGCAGCAGATTCGGTTAAATTTGCATCATCGCTTA
TCAATTGA Coding sequence (CDS) from alignment at sc0000417_pilon:183487..185544- >XLOC_029761 ID=XLOC_029761|Name=XLOC_029761|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3414bp|location=Sequence derived from alignment at sc0000417_pilon:183487..185544- (Clytia hemisphaerica_ch_hm2_pilon)
ACGATTCTTCCCTGTTCATGTAATGATTCCAAATTCAAAGATCCTTTTCA
TAATCACATAATAACAGGTGACTTAACTATCATTGACAATCAAAAATTAC
GTAAACTTTTTTCTCGTGGACCTAAATTTCGTGAACCTAAACAACTAGAT
TTTGAAGCAGCTAAAATGGAAATTTTGAAAGGTGTTGACAAATGCATTAA
ATCCTACTGCGAGCGTTACCATTTAGATGAGGTTGTTCTTAGAGCTTGGA
GAGTGGAAATTGTAAAAGCTATCGACGAGAGAGTACAACAAATTGTTCCC
ACTTTAAAACTTGATCATGTTCTAGAGACATTGAGGGACCCTATTTGTCG
AAAAAGTTTACTAGATTTACAAGAAAGATTTGTTATTGCCCCCATTGACA
AGGCTTCTGGCAATATTTCCTTGATTTGCAAAAGATTTTATGCCGAAGTT
TTGGCAAGGGAATTAGGACTCAATGGCACAGGCTCTGACACTTACAAATC
TGTACGCAAAAAGGATAAAACCATTATTTGTAAACACAAAAAAGACCTTA
AAGATAAATTTGGGATAGAGGTGTCAGTTGGAAATGAAAAACTACCCAAT
ATCTATTGGCTACCAAAAATGCATAAAAACCCTCTGAAATTTCGCTTTAT
CATTGCAGCTCCTAGCTGTTCAGTTAAACAACTTTCCCAGGCAGTAACTT
CAGTTTTTCGTCTCTTTTACAATCAAATTGAAAATTACAACATGAAGTGC
TGTTATTATTCTTCTGTTAAAACATTTTGGGTTATTGAGACGATTCTTCC
CTGTTCATGTAATGATTCCAAATTCAAAGATCCTTTTCATAATCACATAA
TAACAGGTGACTTAACTATCATTGACAATCAAAAATTACGTAAACTTTTT
TCTCGTGGACCTAAATTTCGTGAACCTAAACAACTAGATTTTGAAGCAGC
TAAAATGGAAATTTTGAAAGGTGTTGACAAATGCATTAAATCCTACTGCG
AGCGTTACCATTTAGATGAGGTTGTTCTTAGAGCTTGGAGAGTGGAAATT
GTAAAAGCTATCGACGAGAGAGTACAACAAATTGTTCCCACTTTAAAACT
TGATCATGTTCTAGAGACATTGAGGGACCCTATTTGTCGAAAAAGTTTAC
TAGATTTACAAGAAAGATTTGTTATTGCCCCCATTGACAAGGCTTCTGGC
AATATTTCCTTGATTTGCAAAAGATTTTATGCCGAAGTTTTGGCAAGGGA
ATTAGGACTCAATGGCACAGGCTCTGACACTTACAAATCTGTACGCAAAA
AGGATAAAACCATTATTTGTAAACACAAAAAAGACCTTAAAGATAAATTT
GGGATAGAGGTGTCAGTTGGAAATGAAAAACTACCCAATATCTATTGGCT
ACCAAAAATGCATAAAAACCCTCTGAAATTTCGCTTTATCATTGCAGCTC
CTAGCTGTTCAGTTAAACAACTTTCCCAGGCAGTAACTTCAGTTTTTCGT
CTCTTTTACAATCAAATTGAAAATTACAACATGAAGTGCTGTTATTATTC
TTCTGTTAAAACATTTTGGGTTATTGAGAACAACCAAGAAGTATTGAAAA
GTTTAAATAAATTGAATAAAAAAGGTAAAGCTAGTTGCATTTCCACCTTT
GATTTTTCTACTCTGTACACGAAAATCCCTCATGACAAGTTGTTGTTTGT
TCTAAACGAGTTGACTGATGTTTGTTTTAATGGGGGAGATCGAGAGCTGT
TGTCTGTAACAAAGTCTGGTGCTAGATGGGTGACGCGACCATCCCCAAAT
GGAGTGATATTTACTATAGAGAATCTTTTAAGGAAGCTGTTATACTTGAT
GGATAATTGTTTTTTTACTTTTGGAGACCGTGTTTATAGACAGAAGATTG
GTATTCCCATGGGTTCGGATCCAGCTCCATTCATGGCCAATCTTTTTCTT
TATTACTACGAGTCAGCTTATGTCAAAAAGGTAAAAAAAGAAGATATTTT
TATTGCCAGGAAGTTTCGACATACCTTTCGCTTCATAGACGATCTTTTGG
CCATTAATGATGATGGTGAATTTGAGCGATGCTTTAAAAATATCTACTAC
CCTTCTGAATTAGAACTTAAGAAGGAACACGGTGACACACAAGTATCTTT
CTTTGACTTAGATATTTCAATACAGGGAAGATTTTTCAATACTTCACTAT
ACGACAAGCGTGACAGCTTTCCTTTTTCTATTGTGAGGATGCCTTTTAAA
TGCAGTAACATGCCTTCTAAAATTTTTTATTCCACCATTGGTGCAGAAAT
TTTGAGAATTGGTCGCGCAAGTTCAACATGTGAACCATTTATCAAGTCTG
CCAAAGCTGTTATCGACAGAATGAAGAATCAAGGTGCCCATCCACAAAAA
ATTACAGACATTTTAAAAAGAACTTATGGTAAACATGACGATTTGAAAAA
ATTTGCAGCAGATTCGGTTAAATTTGCATCATCGCTTATCAATTGAAACA
ACCAAGAAGTATTGAAAAGTTTAAATAAATTGAATAAAAAAGGTAAAGCT
AGTTGCATTTCCACCTTTGATTTTTCTACTCTGTACACGAAAATCCCTCA
TGACAAGTTGTTGTTTGTTCTAAACGAGTTGACTGATGTTTGTTTTAATG
GGGGAGATCGAGAGCTGTTGTCTGTAACAAAGTCTGGTGCTAGATGGGTG
ACGCGACCATCCCCAAATGGAGTGATATTTACTATAGAGAATCTTTTAAG
GAAGCTGTTATACTTGATGGATAATTGTTTTTTTACTTTTGGAGACCGTG
TTTATAGACAGAAGATTGGTATTCCCATGGGTTCGGATCCAGCTCCATTC
ATGGCCAATCTTTTTCTTTATTACTACGAGTCAGCTTATGTCAAAAAGGT
AAAAAAAGAAGATATTTTTATTGCCAGGAAGTTTCGACATACCTTTCGCT
TCATAGACGATCTTTTGGCCATTAATGATGATGGTGAATTTGAGCGATGC
TTTAAAAATATCTACTACCCTTCTGAATTAGAACTTAAGAAGGAACACGG
TGACACACAAGTATCTTTCTTTGACTTAGATATTTCAATACAGGGAAGAT
TTTTCAATACTTCACTATACGACAAGCGTGACAGCTTTCCTTTTTCTATT
GTGAGGATGCCTTTTAAATGCAGTAACATGCCTTCTAAAATTTTTTATTC
CACCATTGGTGCAGAAATTTTGAGAATTGGTCGCGCAAGTTCAACATGTG
AACCATTTATCAAGTCTGCCAAAGCTGTTATCGACAGAATGAAGAATCAA
GGTGCCCATCCACAAAAAATTACAGACATTTTAAAAAGAACTTATGGTAA
ACATGACGATTTGAAAAAATTTGCAGCAGATTCGGTTAAATTTGCATCAT
CGCTTATCAATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000417_pilon | genome | sc0000417_pilon:183487..185544 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1306-1704:400 |
| Aaloc | 790-1305:919 |
| Aaloc | 1-789:2059 |
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