XLOC_029705 (mRNA) -

Overview
NameXLOC_029705
Unique NameXLOC_029705
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000098_pilon:1034465..1035160+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_029705 ID=XLOC_029705|Name=XLOC_029705|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=696bp|location=Sequence derived from alignment at sc0000098_pilon:1034465..1035160+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAGAACATTGTTTTTATACGCACCGAAAGTTCATTCATACTAGTAC GCATCGAAAGTTCATTCATACGCACCGAAAGTTCATTCATATGCACCGAA AGTTCATTCATACGCAGCGAAAGTTCATTCATACGCACCGAAAGTTCATT CATACGCACCGAAAGTTCATTCATACGCACCGAAAGTTCATTCATACGCA CCGAAAGTTCATTCATACGCACCGAAAGTTCATTCATACGCACCGAAAGT TCATTCATACGCACCGAAAGTTCATTCATACGCACCGAAAGTTCATTCAT ACGCACCGAAAGTTCATTCATTCGCACCGAAAGTTCATTCGTACGCACCG AAAGTTCATTCGTACGCACCGAAAGTTCATTCATACGCACCGAAAGTTCA TTCATACGCACCGAATTCATTCGCACCGAAAGTTCATTCATACGCACCGA AAGTTCATTCATACGCACCGAAAGTTCATTCATTCGCACCGAAAGTTCAT TCATACGCACCGAAAGTTCATTCATACGCACCGAAAGTTCATTCATACAC ACCGaaagttcatttgttttttaccattttgtctgacattagtgcccttt attttttttaattgttcagttttttttacctgtattttattatatagtcc ttttttttcaattcataacttttttcagaaagaaaaagaaaacgcc

Coding sequence (CDS) from alignment at sc0000098_pilon:1034465..1035160+

>XLOC_029705 ID=XLOC_029705|Name=XLOC_029705|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1000bp|location=Sequence derived from alignment at sc0000098_pilon:1034465..1035160+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAGAACATTGTTTTTATACGCACCGAAAGTTCATTCATACTAGTAC
GCATCGAAAGTTCATTCATACGCACCGAAAGTTCATTCATATGCACCGAA
AGTTCATTCATACGCAGCGAAAGTTCATTCATACGCACCGAAAGTTCATT
CATACGCACCGAAAGTTCATTCATACGCACCGAAAGTTCATTCATACGCA
CCGAAAGTTCATTCATACGCACCGAAAGTTCATTCATACGCACCGAAAGT
TCATTCATACGCACCGAAAGTTCATTCATACGCACCGAAAGTTCATTCAT
ACGCACCGAAAGTTCATTCATTCGCACCGAAAGTTCATTCGTACGCACCG
AAAGTTCATTCGTACGCACCGAAAGATGGAAGAACATTGTTTTTATACGC
ACCGAAAGTTCATTCATACTAGTACGCATCGAAAGTTCATTCATACGCAC
CGAAAGTTCATTCATATGCACCGAAAGTTCATTCATACGCAGCGAAAGTT
CATTCATACGCACCGAAAGTTCATTCATACGCACCGAAAGTTCATTCATA
CGCACCGAAAGTTCATTCATACGCACCGAAAGTTCATTCATACGCACCGA
AAGTTCATTCATACGCACCGAAAGTTCATTCATACGCACCGAAAGTTCAT
TCATACGCACCGAAAGTTCATTCATACGCACCGAAAGTTCATTCATTCGC
ACCGAAAGTTCATTCGTACGCACCGAAAGTTCATTCGTACGCACCGAAAG
taccattttgtctgacattagtgccctttattttttttaattgttcagtt
ttttttacctgtattttattatatagtccttttttttcaattcataactt
ttttcagaaagaaaaagaaaacgcctaccattttgtctgacattagtgcc
ctttattttttttaattgttcagttttttttacctgtattttattatata
gtccttttttttcaattcataacttttttcagaaagaaaaagaaaacgcc
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_029705XLOC_029705-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000098_pilongenomesc0000098_pilon:1034465..1035160 +
Properties
Property NameValue
Aaloc373-495:574
Aaloc205-369:210
Aaloc43-201:49
Aaloc1-42:1