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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000315_pilon:285664..289242- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_029645 ID=XLOC_029645|Name=XLOC_029645|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3579bp|location=Sequence derived from alignment at sc0000315_pilon:285664..289242- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGAAAGACAAGATGCAGTTCGGTGAAAGGACATCTTACAAACAAAAG
CACAGGTATATAATAAGATCTATTTCTTTGAAAAATGAGTCCACTCCATA
AATATTCTAAACAATTTCAATTGACATTAAGGCCGAAAACAGTATTGAAG
AATTTAAAAAAAGAGTAACAAAATTGAAAAGGGCAAAATATTAAAGTGCC
AACACGTATATCTGTGCGTTCACCTTAGTTTACAGTAGTTTGATAATGAA
CTGAAGTTTGCCGTCAAACTGAGGGCAATGTAAAGATGTATGGCAAGTGC
TTGATGATATTGTCCAAAATATTATTGTTGTTTTGATGTGTGAACAGGGG
AGGAAATGATTCTTAAAATGAAAAGTACTAGATAGTCTCTTTAATTTCTA
AATTTTCCCTACCCTGTTTCACAAGTGTGATATCATCCCTACCCTACTAC
ATTTGCTAGTTTGATGTGCTAGTTTCATTCTTTCATTATGTAAGCTTCTT
TTTAAACACTGTGGCCGACTTTCCGGTCTCAACCAATTTATTTTCAAAAC
CAATTACTTTATCTTTATCCAGCATTCTCACCAAATGGAGCAAAATTCGG
TCAGCAGGCTTTGATTCACGACCATATGATGAATCATTACAGATTGATTG
ATAAAGCAAAATGTGAGTTTCATATTTTTTTTTCTCCTCACTCATAGATT
TAATTGGTCAATTTTGTCATTTGACCCTTTGTTGATTTTATTATGTAGAA
CAAACTACATGAAACCAATTTAATTATTTTTGAGTGGTTCAATTTTTTGC
TCAGGTTTTGCATTTGAGCATTACCTTTTGTCTATTAATTCAGATTTATT
TCACTGTTTCTTTTTAGCTTCAATTGACAACAAACCCCCCAAATCAATTA
ACTTATTCATCAAAGGTAACAAAATGAATTTGGTTGTGTTACAGGCCCAA
TCGACCATGTCATTCCTGAAATCGAAAATAATAATATTTATCAATAACTC
AATTTTATGAAAAACTTTTTTCTAACAATGAATGACCAATTCCCTCTCCC
GATTTAATGAGCATTTTTTTGTAGGCCCCTTTGTTATTTGTTGTATTCAT
AATTCTTCTGTATTTTTACAATGGTTTTTTTTCTACTTACAGCTAAACAA
AAGAAAGCTCAATCAAATAAAATTGTATACAGAACAGCTTTTCAAGAAGG
CAAACACAATATCAGTACATCTCAAACTAACAAGGTATTAAGATTCAATT
TTATGAATAGCTTTCCTATTCAGCTATTAGACGTAGCTTCTGTCATTTTA
TTTAATGAAAAATTTTATAATTGCCAACTTGTGTATTAGCCAATGGCTAT
GGTGAAATCTTAATAAATTTACTTAAGCTCAATGGCTAACTTTCACTTTA
AATCGATCTTCAGAAAGCTGATCTTTCAAGCCCAAACAATCAATATCATG
AAGCAGATGCAAGACAAATTGAAGAAAGCTTTCTACTTGGACAAAGAGAA
GATGTTATTTCTCCTATAGAATCCTTTACAAACATTCGCTCAAGAACAGT
ACCATGTTATAAGAATGACCATGGTAATTTAATAAAAAGATCAAGTACCC
CAAAATACAAAATTGAAATGTATGCTCCTGAAACAGGGCCACCATTACTG
AAAGGTTCTATGTATAATAAACACATATCTCCAGAAAAGTCTTCACACGA
TTTGATAGGATATTCAAATGATTTAAAACATGAGAAATCAGCTATATCAA
GACCCTTGGATCCTAAAATTGCTTGGAGTAACGGTACAGTTAGTTATAGA
GAACCGAGATATACGAAATCAGTTCGTCTTGACATGTCTCTGATGTCGTT
GAATGAACAACTTAACCACACTCAATCATTGAACAAATTTACCAATAAAG
AAATACCAGAATACGAGGTGGACAGGCTACAAAAACAAGAAGAATTGATG
TAAGTTTGTGATTTTTCAATATTATTATAATCTATTTTTATCACCATCTT
ACAAAGTTTTATTGAAAATTAGCTTTTTGCATAGTGGAATAAAAACCTTT
GCGATGAAGAGACTAATGATTATATTGATGGGGATTTGATCAATCTGGGG
AGTGATGCAGCCAATTAGATTCCATTGCTATCAATATTCACACTCATTTT
AGCAGAAGCATAGCAGGTGTACGGATATGACAGTGTATTAGTGACAAAAT
AAGGATTTTAGCAATTTCTGCTTTTGTTGCTGACAATGCAGTGAAGGAGA
ATGTGTTTGTTTAATTCAGTGTTGATGACTCACCCCCTTTACCTGCATAG
TCTTGCAGTAGTAATTATTACGTTATTTAAAAACTCTTTAATAAATTTGT
GATATAATAGTAAATCTACTCAATTATTTTATATTTCAGTGCAGAGGAGC
AGTTATACCTTCAATTCATCGAAGAAGTGACCACAGATATCATCACCAGG
GGAATATTCAGTGATCGGTAACTATATTGAAGAATCTGAAAATGCATTTC
AGTTTTTGTGATATTATTACTAAATTTCATGTTGTTGATTTTGTTGTTGA
TATCTTCTCTCGAATCATTCATTTTTTAAATTAAGCAATTTTTTTCCAAC
TCTCTGTAATTACCCTGCATATATATATTTTTGTACAAATTTTCTTTTTT
CCTAATGTGATCTAAAACTTGATAAATCTTCCAGACCTAAAATCCCAGCA
TAGTAATTGAACTTTTAACTGTTTTGGGTGCGTGCAACATAATACAATGA
GCTGTATATCTGTTTTCTCAGGGTGTTGAACCAAGTCTTCGATGCACATC
TGGAAAAGCGGAGAGGTTATCTGAATGAGGTATTAGTTTATTTATTTCCC
CTTGTTCTTTCAATTCTAATTCTGTTCAACGATAACTTAGAATAAAAAGG
AGTTTTTGAGACTCCCTTCCTTCTCCCCTTGCAGGGTATTTTTCAAGCAC
TTTTTTATCACCGTTATTCGGTGGCAATAACCTCAATTTTAAAATTGACT
TTCAAACTCAATTTTGTGTAGAAAAAAATGTGAAAATTAAATAATGCAAA
GTAGAAAAATGATGGTATAAAAATTTGAAGGAAAATGAACTTTATGTGTT
AATTAATAATGAATTTAACAAGTATCAAAGTTCTCTTCATAACCCAATCA
TGGTGGGTGAAATAATTCGGGAAATACTTTGAAAAATTTCTTAGAAAAGT
ATGCAATCCTGACTTCATCGGGCGTCATCTGTTTTATTAATTTGTCTAAC
TTCATATTCCAATGAATATATTTCCATAGGGTAGGATGCAAGCAATGATC
GAAGAATTGAAAAGAGACTTGAATGTAGAAGATGAAGATTCAAGAAATTC
TTTACATGACGTCATCAATTACAAAGGAAAAAGTAACAGAACCTCTAATG
ATAGACATAACAATGCTCTTACTAAGAATCAATATACCAAACGAAAAATT
GAAGATTTGGTAGAAGAGTCTTTGTTTGATGAAAAGGACTTTTCAAGAGA
TGATCGTTCTGGTGTCGAAGATAACAATATACTTGACACTATTTCAAAAG
ATCAGCTTTCAGGTGCTCAGTTATCTAAT Coding sequence (CDS) from alignment at sc0000315_pilon:285664..289242- >XLOC_029645 ID=XLOC_029645|Name=XLOC_029645|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2514bp|location=Sequence derived from alignment at sc0000315_pilon:285664..289242- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGAAAGACAAGATGCAGTTCGGTGAAAGGACATCTTACAAACAAAAG
CACAGATGAGAAAGACAAGATGCAGTTCGGTGAAAGGACATCTTACAAAC
AAAAGCACAGCATTCTCACCAAATGGAGCAAAATTCGGTCAGCAGGCTTT
GATTCACGACCATATGATGAATCATTACAGATTGATTGATAAAGCAAAAT
CATTCTCACCAAATGGAGCAAAATTCGGTCAGCAGGCTTTGATTCACGAC
CATATGATGAATCATTACAGATTGATTGATAAAGCAAAATCTTCAATTGA
CAACAAACCCCCCAAATCAATTAACTTATTCATCAAAGCTTCAATTGACA
ACAAACCCCCCAAATCAATTAACTTATTCATCAAAGCTAAACAAAAGAAA
GCTCAATCAAATAAAATTGTATACAGAACAGCTTTTCAAGAAGGCAAACA
CAATATCAGTACATCTCAAACTAACAAGCTAAACAAAAGAAAGCTCAATC
AAATAAAATTGTATACAGAACAGCTTTTCAAGAAGGCAAACACAATATCA
GTACATCTCAAACTAACAAGAAAGCTGATCTTTCAAGCCCAAACAATCAA
TATCATGAAGCAGATGCAAGACAAATTGAAGAAAGCTTTCTACTTGGACA
AAGAGAAGATGTTATTTCTCCTATAGAATCCTTTACAAACATTCGCTCAA
GAACAGTACCATGTTATAAGAATGACCATGGTAATTTAATAAAAAGATCA
AGTACCCCAAAATACAAAATTGAAATGTATGCTCCTGAAACAGGGCCACC
ATTACTGAAAGGTTCTATGTATAATAAACACATATCTCCAGAAAAGTCTT
CACACGATTTGATAGGATATTCAAATGATTTAAAACATGAGAAATCAGCT
ATATCAAGACCCTTGGATCCTAAAATTGCTTGGAGTAACGGTACAGTTAG
TTATAGAGAACCGAGATATACGAAATCAGTTCGTCTTGACATGTCTCTGA
TGTCGTTGAATGAACAACTTAACCACACTCAATCATTGAACAAATTTACC
AATAAAGAAATACCAGAATACGAGGTGGACAGGCTACAAAAACAAGAAGA
ATTGATAAAGCTGATCTTTCAAGCCCAAACAATCAATATCATGAAGCAGA
TGCAAGACAAATTGAAGAAAGCTTTCTACTTGGACAAAGAGAAGATGTTA
TTTCTCCTATAGAATCCTTTACAAACATTCGCTCAAGAACAGTACCATGT
TATAAGAATGACCATGGTAATTTAATAAAAAGATCAAGTACCCCAAAATA
CAAAATTGAAATGTATGCTCCTGAAACAGGGCCACCATTACTGAAAGGTT
CTATGTATAATAAACACATATCTCCAGAAAAGTCTTCACACGATTTGATA
GGATATTCAAATGATTTAAAACATGAGAAATCAGCTATATCAAGACCCTT
GGATCCTAAAATTGCTTGGAGTAACGGTACAGTTAGTTATAGAGAACCGA
GATATACGAAATCAGTTCGTCTTGACATGTCTCTGATGTCGTTGAATGAA
CAACTTAACCACACTCAATCATTGAACAAATTTACCAATAAAGAAATACC
AGAATACGAGGTGGACAGGCTACAAAAACAAGAAGAATTGATTGCAGAGG
AGCAGTTATACCTTCAATTCATCGAAGAAGTGACCACAGATATCATCACC
AGGGGAATATTCAGTGATCGTGCAGAGGAGCAGTTATACCTTCAATTCAT
CGAAGAAGTGACCACAGATATCATCACCAGGGGAATATTCAGTGATCGGG
TGTTGAACCAAGTCTTCGATGCACATCTGGAAAAGCGGAGAGGTTATCTG
AATGAGGGTGTTGAACCAAGTCTTCGATGCACATCTGGAAAAGCGGAGAG
GTTATCTGAATGAGGGTAGGATGCAAGCAATGATCGAAGAATTGAAAAGA
GACTTGAATGTAGAAGATGAAGATTCAAGAAATTCTTTACATGACGTCAT
CAATTACAAAGGAAAAAGTAACAGAACCTCTAATGATAGACATAACAATG
CTCTTACTAAGAATCAATATACCAAACGAAAAATTGAAGATTTGGTAGAA
GAGTCTTTGTTTGATGAAAAGGACTTTTCAAGAGATGATCGTTCTGGTGT
CGAAGATAACAATATACTTGACACTATTTCAAAAGATCAGCTTTCAGGTG
CTCAGTTATCTAATGGTAGGATGCAAGCAATGATCGAAGAATTGAAAAGA
GACTTGAATGTAGAAGATGAAGATTCAAGAAATTCTTTACATGACGTCAT
CAATTACAAAGGAAAAAGTAACAGAACCTCTAATGATAGACATAACAATG
CTCTTACTAAGAATCAATATACCAAACGAAAAATTGAAGATTTGGTAGAA
GAGTCTTTGTTTGATGAAAAGGACTTTTCAAGAGATGATCGTTCTGGTGT
CGAAGATAACAATATACTTGACACTATTTCAAAAGATCAGCTTTCAGGTG
CTCAGTTATCTAAT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000315_pilon | genome | sc0000315_pilon:285664..289242 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 958-1257:301 |
| Aaloc | 901-957:808 |
| Aaloc | 823-897:1190 |
| Aaloc | 286-819:2167 |
| Aaloc | 196-285:2436 |
| Aaloc | 148-192:2711 |
| Aaloc | 58-144:3006 |
| Aaloc | 1-54:3580 |
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