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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000315_pilon:281606..284892- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_029644 ID=XLOC_029644|Name=XLOC_029644|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3287bp|location=Sequence derived from alignment at sc0000315_pilon:281606..284892- (Clytia hemisphaerica_ch_hm2_pilon)
AAAAAGAAAAGAAAAATGAACAACACAATCAAAAGATGTCCAATTTGCTT
ACGACTAGTTACCAAGACAATGCGCTCGTTGAACACATCAACAACTGTAT
TACAAAAGGTACAATCATTTTCTTAGGTCTTACTTTCTATAATGTTATTT
AGGCTCTTCCATAAAGTTTCCTTGGATTTTGGAGCAAGTTTGTTTCACGT
TGTAAAGAGGATGCAAGTTTTGTCAAGGGGTAATAATATCCAAACTAGGT
TTGGCTTGGGGTGAGGTAAAAAATGAAAGTGTTTCGAGATATACTAACTG
TTTTAGCTTATGCCTTTTTGAAATTGTTCTATTGGTCTATTTCGTAGATT
TAAAGATTCTCATTTTCAGGCTGCACTAAAGGAACACCCAGAACCTCATC
AACACTATGATTACGTCAGCAAGCCAAATCCAGACTCCAACATTCGACAG
GTGGTATATTCAAAAGCTGCAAATAGTGACGAAGAAATATTGAATACAAA
ACGTACCATGACTAATCATTGGAATGACGAATTCTGGAAAGTGCATAATC
AAAATTTCTTTCAGGTATTCAATACAGGGTCCTTACAGAACTAACTTTTT
ATTTACAGTGTGTGTCTGAGTGGAGCAGTTTTTCTTTAAAATCATCTTTT
AGAATAATTACAATTAGTCCGGAGGCTGGAGGAGGTCCACTTTGTCTGTC
AGAGAGCACGTGTAAACTACAAAATTATTGCACAATGTCTGAATTTTGTG
AATTTATTTGTTGACTGTCCGAAATTTTCTCGTACAATCATGGTCGAAAT
ATATTGAGAATTAAGCTTATTTCCTCGTTTTTCGTAATTTGGAGTTCGGG
CGAGAAAGTCGATTTTGGGCCATCTCTTAAATTTAATCGAATATTTCAAT
TTGGCTCGGTTTTATAGACTTCCAGGCTATATTATGAGCCTTATTGAACC
ATTATTGAACTCTTGGATCTTTTTGAGTCTTAAGTCTCATGTTAAAACTC
AGAGTTAAAACTCTACCCTTCCAACCTACTTTAGAGCACTTATAAAGCAC
AAAACTTCCCGGTGAATTTCCCTTTTTCTCAAATATTACGACCATGATTG
TAGCAATGTATTGCACAGACTATAATACAAATATAGCGGAAAATTTCGAC
GTCAATTGTCCCTATTTAACCCCGGGCTATATAATAAAACCTTTGTTCAA
CCAATGATAACCGTATGAATTCCGTCCCTAGAAGATGGCTTTATTCCTCT
CAGATTTGAAGTTTTGAAGCACTAAATGAAGCCTATCGCTGTTATTGTAA
CTGCGCAATTTATGCTGATTTTCAGTCACTTTAGCGTGTCCCAATTAAGG
ATTCGTGAGACCATGAGAAAAACACGGCTCGTACTGTAACATGAGTATTT
CTATTTCCTTTCATAGGCAAAGAAAGAATTTATCGAGACAGCAAATGCAG
CCTCTGGAACAGGTATGAATCGAGATAGCCTTTGCTTAGTCTTAATCCGA
CGCGCGTACGGTGCAAAATTCGAATTTCTATGATACAGTGCATAGTAGAT
ATTTTTATTCGCAGTGTGAAAAATGACATTAAGAAAAGTGCACTCTTTTC
AAATTGTACGTCCCTTTTTTCTTAGGCTTCTTTTCTTCACAAAACTAGCA
AGAGTATTCTTACTTCTTCTTATCTATATGTTTTTCTATCCTACCATGTG
AAAGTCAAAGTTTGTTTCAATCTTTTTCAAACGTTCGAATAAAGAATTTA
ACTGCCGATCTTTCGTCGATCTTTTGACTTCTCTCACATCGAAACATCAG
ACCTAAAGGCAGAGATAAATGTTATGTTAAAATCAAACCAATTTCTTATT
TTCGTTCAACATAGGACAAGAAGTGGCAGACAAATTGTCGATTTTCTATA
AAGAATTTCTTGAAAAGAATCACGATGTTTACATGGAATATAACAGGTAT
AAAGATGAAGTACTTTAGGTGTACAAACTTTCGCGGGGACGAAAAATCGC
GAAATTCACGACCTTTACTTTCGCGAATTTAACGGAAAAATATTTTTCGC
GAGCATAAACTTTCGCAAATTAAGACAAAAAAATGAGAATTTTCACATGA
AAAAATGGCTTAGAAGGACAAATACTTCTTGGATTGGCTTGAAACATTTA
TCCTTTGCATAATTATAATTAGTCTTTTAGCAGGCTAAAAAGTGCCATAA
AAGTTACATTTTATTTAAAGTTTGAAGTTTTACAGATTTTCTATTTTGCC
AAGAATTTTTCGCGAGCATAAACTTTCGCGAATGGCACTTCCTAGAATTT
TTAAAGACATTTGCTTTCGCGAAAATCGCGAAAGTCTGTACGCCTAAAGC
AACATTCCTATCGAGATGCATTGAAAGCTTCACTGGCCTCGTTTGTAAAA
TGTAGTAGCCAAAATACTTAAAAGATAATCGCGTTTGTAAACGCTTACTT
TTTTGATGAAGTCGATAACTTACCTACCTTTACGTGATTGTTCTGTTTGC
AAACGAGGTTAACAAATCTCGAAAAGATGAAACCACATACCTATTCTTAA
TTATAGTGTACATGTTTTTTTTATAAGCAAGTATATGCCCCTTGGTCAGG
CTCGTGTATGCTTAAGTTCTCAAAGCATCCAGGCATAGTTTATGCTTATT
ATATGCTTAAGAATCATGCTATGATTCACCCCGAGCCAAGTTTTTAATGA
AATTTCAGAAATTTTGTAAAATTTTGTTCAGATTTTGGGAGCAGTGGAAT
GTTAGCTAGCTGTGGAATGTCTTATTTTTTACTTGAACTCTATCAAACCT
TTTTAAACAGATAAAAATGACCACTTGAAAAATATTTTAGGCTGACATAC
TGTATATGCTCATGTTATGCTTAGGAATTCTGCAAATCTGAGCCTTCATA
TGCTTATAAGCGTTATGCTTATAAAAAAAACAACATGTAGTGTCAAAAGA
AAGGTCTGAATCAGAATAGCACAAAATCGACTTGACTTTATCTTTTGATA
CTTGGACAACTTAAGATGTGAGAAATTTGTTTATTAGAAAGAAGTATTCG
CCTTTCAGAGAAAATTTTTGGGATGGTCTTTTAGATTTTGACTACCTCCG
CCATTTTGAAATGTCCACTGTTAAAGGAGGTTACTGACTTTAAAATAACC
TTCTACTTTGTATTTCTAGAGAATGGTATCGTCGCAACTTCAGTCTCCTC
TGGTTAAACGTTTGTTCATCCTTACGTAAACCCTTTTCACGGCAGCCGAA
AAGTGATGACGTCACAAACAAAAAAGATATTTTGTAA Coding sequence (CDS) from alignment at sc0000315_pilon:281606..284892- >XLOC_029644 ID=XLOC_029644|Name=XLOC_029644|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1098bp|location=Sequence derived from alignment at sc0000315_pilon:281606..284892- (Clytia hemisphaerica_ch_hm2_pilon)
AAAAAGAAAAGAAAAATGAACAACACAATCAAAAGATGTCCAATTTGCTT
ACGACTAGTTACCAAGACAATGCGCTCGTTGAACACATCAACAACTGTAT
TACAAAAGAAAAAGAAAAGAAAAATGAACAACACAATCAAAAGATGTCCA
ATTTGCTTACGACTAGTTACCAAGACAATGCGCTCGTTGAACACATCAAC
AACTGTATTACAAAAGGCTGCACTAAAGGAACACCCAGAACCTCATCAAC
ACTATGATTACGTCAGCAAGCCAAATCCAGACTCCAACATTCGACAGGTG
GTATATTCAAAAGCTGCAAATAGTGACGAAGAAATATTGAATACAAAACG
TACCATGACTAATCATTGGAATGACGAATTCTGGAAAGTGCATAATCAAA
ATTTCTTTCAGGCTGCACTAAAGGAACACCCAGAACCTCATCAACACTAT
GATTACGTCAGCAAGCCAAATCCAGACTCCAACATTCGACAGGTGGTATA
TTCAAAAGCTGCAAATAGTGACGAAGAAATATTGAATACAAAACGTACCA
TGACTAATCATTGGAATGACGAATTCTGGAAAGTGCATAATCAAAATTTC
TTTCAGGCAAAGAAAGAATTTATCGAGACAGCAAATGCAGCCTCTGGAAC
AGGCAAAGAAAGAATTTATCGAGACAGCAAATGCAGCCTCTGGAACAGGA
CAAGAAGTGGCAGACAAATTGTCGATTTTCTATAAAGAATTTCTTGAAAA
GAATCACGATGTTTACATGGAATATAACAGGACAAGAAGTGGCAGACAAA
TTGTCGATTTTCTATAAAGAATTTCTTGAAAAGAATCACGATGTTTACAT
GGAATATAACAGAGAATGGTATCGTCGCAACTTCAGTCTCCTCTGGTTAA
ACGTTTGTTCATCCTTACGTAAACCCTTTTCACGGCAGCCGAAAAGTGAT
GACGTCACAAACAAAAAAGATATTTTGTAAAGAATGGTATCGTCGCAACT
TCAGTCTCCTCTGGTTAAACGTTTGTTCATCCTTACGTAAACCCTTTTCA
CGGCAGCCGAAAAGTGATGACGTCACAAACAAAAAAGATATTTTGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000315_pilon | genome | sc0000315_pilon:281606..284892 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 439-555:118 |
| Aaloc | 358-435:1422 |
| Aaloc | 310-354:1872 |
| Aaloc | 115-309:2919 |
| Aaloc | 7-114:3288 |
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