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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000566_pilon:24557..27217- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_029625 ID=XLOC_029625|Name=XLOC_029625|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2661bp|location=Sequence derived from alignment at sc0000566_pilon:24557..27217- (Clytia hemisphaerica_ch_hm2_pilon)
CTATCGAACGATCGAACTGCTGCTGAACCACAAACAGCGATCAATGCAAA
ACCATCAACACCATCCAAACATCCACTATCGAACGATCAAACTGCGGCTG
AACCACAAACAGCAATCAATGCAGAACCATCAACACCATCCAAACATCAG
CTACCTAATGATCATACCGCATTCAGTCAAGATACGAACAGTAATCCTGA
TTTCGTGAAACTTTATGATATCTGTCGCACTTATCGCCCTCCAAAATTTG
TTCTTGTCGGTGACAATCTAGAATATAAAGTGGTGAGGAGGCATATGACA
ACGTCAAAACAAAACATAGACTACCATATGTTTAACATGATGGGTGTTCG
AAACAGAGTCAATGCACCCGTTGAATTGGAAGATATGATACAACCGCCAT
TGGAAAATAAATTGGATATCGATTTGTCAAATTATTTTCCAAATAAAAAT
GACGAAAGCAAACTTGCAACAGAATTTTCAACACTTGTGTTTCGAGTTCT
TACGGAATACCGAGAGGACATGTCTCGCATGAGAAATCATTTGCGAAGTG
TGATACCCCATGACTATATGGAAGAGACCAAAAGAAAATCAGAGATAGTA
AGAAATTTTCACTTTTTTTCTTTTTTTAAAGCATACAGGAAAATCTTGTC
GAGGCTCAATTTCATTTTCAGCCATAATTTATTTTATGCTTAATGATATG
CTTAGACTTCAATTTGTTGATTTTCTTTGACTTAATGAAAATTTCGAATT
TGGAGCATTGATTCGGCTCAAAAAATTAGAGTTTTCTTTGTAATTTGGCA
CTTCAGGCGAAAATCTTTGGTCTAAGAAAGCTCAAACAGTTTTAAAAGTA
ACCCTTATAAGGTCCAAGTTTTAGTAAAGGCTTGAATATCTTTGCATTTT
AGCTTGGAGGAATGCTTAGCATTATGTTTATTTTAAATGATGGCCTTCTT
TCTCTTGAGAAACGAATCAGTTTTCTATTAAACAAAAAATTTGATGCAGG
TATATCAAAAATGTTTTTGACGTTTCCTTTACAGACAACATTGGGCATTC
TCAATAAAAACGAGAACAAGACTGAGGATATGATTGAGATCATGGAAGAC
CTGCATACAATGGTACCCTGTCTCGAAGACGGAGAGCTGGTCAAAACGTT
CGCAATAGGAGATTTGCTGACCTTGGAGAGAGAAATCCATAGCCAAGAAG
ATTTAAGGTGTTCCACAACAGCCATCAAAAGGCTTGAAGGTTTAATTCCA
GGACTAGCAGACTTTCATACATATGGAAATTTTATGGAGGTATACTATAT
TTTAATGAAAGAAAAAGATTTTTTAAAGAAATTTTATTCGTCTTGATTAA
TAAACTTGTTGGTACACTTTGTTGAGAATGACTGTGAATCTGAATCTCAA
CATCATTTTAAGATTGATTGTATAAATTATAGTTCTAATGATTTGAATTT
TGAATAAATTGCAGGTGAGTTTTAAGACTTCAACTTTATAATATGAAAGA
AAGTAGAATTTAAGCTCTCATCCTTAATCTTTATCCCTTTATTTTACTTT
AAAGGTTGTTTGGCACTTCTTGTATGACGCCTCCTCATCGAGCGACGTTG
GCACACTTTACCAGGCAAGAAATTTTTTGAACGCTAGAAACGTGTCAAAA
GAGCCTATGAAATGCGTAAACGCATGTGAAGAGTTGTTGAACAAGTACAC
TGAGGCTTTAACTCTTGCAGCCTTCCATGAATATATCGAAACCAACAAGA
TTGATCTATCAAAACTGAAGGAACCAACCGCGCAGAATAAGGAATCGTTG
AAAAATGTGATCAGCAAGTTTGTCGAGAGCTATGTCATTGCTGAAACCCC
AGATATTGCTGCAAGTGCTATCAGTTATGATTGCCAATTTTGCACTAAGT
CGTACAAACGAAAGGCTGGTTTGGTAAACCATCTCAAAAAGCAACATCCT
GGGAATGAACAAGATGAAAGTGAAAAATCTGGAGATGATTGTATCGTCAA
TTACAGCAAAAATGCCTTGATGTTAGGCTATTTGGTTAAGAACTTTGCTG
ACGCCAGGAGATATGGAGATGGTGAGCGAATCATAAGATTGTACAAGTTT
CTCATGGTGTTGTTCAAAATTGATCATCGATCTAAATATGGCTTTTATTC
ACTTCAATTACTTGCTCAAATCAACAACCTTCTACCTCCAGCTCTTGCTT
TCGAGTTGAAGTGGAACAGGACAGTAAACAACACTGGCCGATACGATGGT
AATGTCGAGCTCGACCGTGAGCTCGAGCATCGAAACAAATATGCCAAAGA
AGAACTCAAGCATTTCCAGGGAAAGCTAACTGAGCAGTCGATAAAAAGAG
TAAGCCAGTCGTACGATAAAGTGAGGGAGATCGTGGACAAGTTTGACATC
GAAGCTAACGTTTCAAAACAATCAGGGAAACACACCGTTCCTGATTGGAA
GGCAGATGTATTGGAGCTTTCTGAACAATTCAAAAGTTCCAAACTTTTTA
CCGTGGACCCGAATGGAAGATCCCACAAAAGATTCCCGGGATTCCCGAAG
AACGTTTTTAATGGAATTGATGCCACAACATGTAAAAACTGGGCATTGGA
CTCTGTCATGGACGAATTTAACAGTCTTAATATTTACAAGCATCCATTTT
ATAAAGTTTAA Coding sequence (CDS) from alignment at sc0000566_pilon:24557..27217- >XLOC_029625 ID=XLOC_029625|Name=XLOC_029625|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3918bp|location=Sequence derived from alignment at sc0000566_pilon:24557..27217- (Clytia hemisphaerica_ch_hm2_pilon)
CTATCGAACGATCGAACTGCTGCTGAACCACAAACAGCGATCAATGCAAA
ACCATCAACACCATCCAAACATCCACTATCGAACGATCAAACTGCGGCTG
AACCACAAACAGCAATCAATGCAGAACCATCAACACCATCCAAACATCAG
CTACCTAATGATCATACCGCATTCAGTCAAGATACGAACAGTAATCCTGA
TTTCGTGAAACTTTATGATATCTGTCGCACTTATCGCCCTCCAAAATTTG
TTCTTGTCGGTGACAATCTAGAATATAAAGTGGTGAGGAGGCATATGACA
ACGTCAAAACAAAACATAGACTACCATATGTTTAACATGATGGGTGTTCG
AAACAGAGTCAATGCACCCGTTGAATTGGAAGATATGATACAACCGCCAT
TGGAAAATAAATTGGATATCGATTTGTCAAATTATTTTCCAAATAAAAAT
GACGAAAGCAAACTTGCAACAGAATTTTCAACACTTGTGTTTCGAGTTCT
TACGGAATACCGAGAGGACATGTCTCGCATGAGAAATCATTTGCGAAGTG
TGATACCCCATGACTATATGGAAGAGACCAAAAGAAAATCAGAGATACTA
TCGAACGATCGAACTGCTGCTGAACCACAAACAGCGATCAATGCAAAACC
ATCAACACCATCCAAACATCCACTATCGAACGATCAAACTGCGGCTGAAC
CACAAACAGCAATCAATGCAGAACCATCAACACCATCCAAACATCAGCTA
CCTAATGATCATACCGCATTCAGTCAAGATACGAACAGTAATCCTGATTT
CGTGAAACTTTATGATATCTGTCGCACTTATCGCCCTCCAAAATTTGTTC
TTGTCGGTGACAATCTAGAATATAAAGTGGTGAGGAGGCATATGACAACG
TCAAAACAAAACATAGACTACCATATGTTTAACATGATGGGTGTTCGAAA
CAGAGTCAATGCACCCGTTGAATTGGAAGATATGATACAACCGCCATTGG
AAAATAAATTGGATATCGATTTGTCAAATTATTTTCCAAATAAAAATGAC
GAAAGCAAACTTGCAACAGAATTTTCAACACTTGTGTTTCGAGTTCTTAC
GGAATACCGAGAGGACATGTCTCGCATGAGAAATCATTTGCGAAGTGTGA
TACCCCATGACTATATGGAAGAGACCAAAAGAAAATCAGAGATAACAACA
TTGGGCATTCTCAATAAAAACGAGAACAAGACTGAGGATATGATTGAGAT
CATGGAAGACCTGCATACAATGGTACCCTGTCTCGAAGACGGAGAGCTGG
TCAAAACGTTCGCAATAGGAGATTTGCTGACCTTGGAGAGAGAAATCCAT
AGCCAAGAAGATTTAAGGTGTTCCACAACAGCCATCAAAAGGCTTGAAGG
TTTAATTCCAGGACTAGCAGACTTTCATACATATGGAAATTTTATGGAGA
CAACATTGGGCATTCTCAATAAAAACGAGAACAAGACTGAGGATATGATT
GAGATCATGGAAGACCTGCATACAATGGTACCCTGTCTCGAAGACGGAGA
GCTGGTCAAAACGTTCGCAATAGGAGATTTGCTGACCTTGGAGAGAGAAA
TCCATAGCCAAGAAGATTTAAGGTGTTCCACAACAGCCATCAAAAGGCTT
GAAGGTTTAATTCCAGGACTAGCAGACTTTCATACATATGGAAATTTTAT
GGAGGTTGTTTGGCACTTCTTGTATGACGCCTCCTCATCGAGCGACGTTG
GCACACTTTACCAGGCAAGAAATTTTTTGAACGCTAGAAACGTGTCAAAA
GAGCCTATGAAATGCGTAAACGCATGTGAAGAGTTGTTGAACAAGTACAC
TGAGGCTTTAACTCTTGCAGCCTTCCATGAATATATCGAAACCAACAAGA
TTGATCTATCAAAACTGAAGGAACCAACCGCGCAGAATAAGGAATCGTTG
AAAAATGTGATCAGCAAGTTTGTCGAGAGCTATGTCATTGCTGAAACCCC
AGATATTGCTGCAAGTGCTATCAGTTATGATTGCCAATTTTGCACTAAGT
CGTACAAACGAAAGGCTGGTTTGGTAAACCATCTCAAAAAGCAACATCCT
GGGAATGAACAAGATGAAAGTGAAAAATCTGGAGATGATTGTATCGTCAA
TTACAGCAAAAATGCCTTGATGTTAGGCTATTTGGTTAAGAACTTTGCTG
ACGCCAGGAGATATGGAGATGGTGAGCGAATCATAAGATTGTACAAGTTT
CTCATGGTGTTGTTCAAAATTGATCATCGATCTAAATATGGCTTTTATTC
ACTTCAATTACTTGCTCAAATCAACAACCTTCTACCTCCAGCTCTTGCTT
TCGAGTTGAAGTGGAACAGGACAGTAAACAACACTGGCCGATACGATGGT
AATGTCGAGCTCGACCGTGAGCTCGAGCATCGAAACAAATATGCCAAAGA
AGAACTCAAGCATTTCCAGGGAAAGCTAACTGAGCAGTCGATAAAAAGAG
TAAGCCAGTCGTACGATAAAGTGAGGGAGATCGTGGACAAGTTTGACATC
GAAGCTAACGTTTCAAAACAATCAGGGAAACACACCGTTCCTGATTGGAA
GGCAGATGTATTGGAGCTTTCTGAACAATTCAAAAGTTCCAAACTTTTTA
CCGTGGACCCGAATGGAAGATCCCACAAAAGATTCCCGGGATTCCCGAAG
AACGTTTTTAATGGAATTGATGCCACAACATGTAAAAACTGGGCATTGGA
CTCTGTCATGGACGAATTTAACAGTCTTAATATTTACAAGCATCCATTTT
ATAAAGTTTAAGTTGTTTGGCACTTCTTGTATGACGCCTCCTCATCGAGC
GACGTTGGCACACTTTACCAGGCAAGAAATTTTTTGAACGCTAGAAACGT
GTCAAAAGAGCCTATGAAATGCGTAAACGCATGTGAAGAGTTGTTGAACA
AGTACACTGAGGCTTTAACTCTTGCAGCCTTCCATGAATATATCGAAACC
AACAAGATTGATCTATCAAAACTGAAGGAACCAACCGCGCAGAATAAGGA
ATCGTTGAAAAATGTGATCAGCAAGTTTGTCGAGAGCTATGTCATTGCTG
AAACCCCAGATATTGCTGCAAGTGCTATCAGTTATGATTGCCAATTTTGC
ACTAAGTCGTACAAACGAAAGGCTGGTTTGGTAAACCATCTCAAAAAGCA
ACATCCTGGGAATGAACAAGATGAAAGTGAAAAATCTGGAGATGATTGTA
TCGTCAATTACAGCAAAAATGCCTTGATGTTAGGCTATTTGGTTAAGAAC
TTTGCTGACGCCAGGAGATATGGAGATGGTGAGCGAATCATAAGATTGTA
CAAGTTTCTCATGGTGTTGTTCAAAATTGATCATCGATCTAAATATGGCT
TTTATTCACTTCAATTACTTGCTCAAATCAACAACCTTCTACCTCCAGCT
CTTGCTTTCGAGTTGAAGTGGAACAGGACAGTAAACAACACTGGCCGATA
CGATGGTAATGTCGAGCTCGACCGTGAGCTCGAGCATCGAAACAAATATG
CCAAAGAAGAACTCAAGCATTTCCAGGGAAAGCTAACTGAGCAGTCGATA
AAAAGAGTAAGCCAGTCGTACGATAAAGTGAGGGAGATCGTGGACAAGTT
TGACATCGAAGCTAACGTTTCAAAACAATCAGGGAAACACACCGTTCCTG
ATTGGAAGGCAGATGTATTGGAGCTTTCTGAACAATTCAAAAGTTCCAAA
CTTTTTACCGTGGACCCGAATGGAAGATCCCACAAAAGATTCCCGGGATT
CCCGAAGAACGTTTTTAATGGAATTGATGCCACAACATGTAAAAACTGGG
CATTGGACTCTGTCATGGACGAATTTAACAGTCTTAATATTTACAAGCAT
CCATTTTATAAAGTTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000566_pilon | genome | sc0000566_pilon:24557..27217 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 853-1959:1108 |
| Aaloc | 598-852:1628 |
| Aaloc | 1-597:2662 |
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