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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000358_pilon:98552..101247- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_029553 ID=XLOC_029553|Name=XLOC_029553|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2696bp|location=Sequence derived from alignment at sc0000358_pilon:98552..101247- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTGAGGAAAAAGAATCTGGCAATATTTGGCCTGAACTTGACCTAAC
AGACTCCGAAGATGAAGAGACCACAACAAAATTAAGCAAAAGGAAAAATA
TCTTAATCGAATGTGCACCTGAAGTTACAAAGGAAGAAATTGAAGGTGAT
TTTCCAATGTTTTTGAAGAACAAAGATGATGGCCAATCGTCTGATAGTGA
AGAAAGTGATGAAGAAAAAAAAGAGGTAAAATTGTTTTGTTATTTAAAAA
TAATCAAGCTCCTAAGTTCTTTTTATGTATAAATATCTGCTTCTCTCCTC
AACAAAAGGATGAGGGACTGTAATTTTTGAATTTTCCTCAATTTCTTCAT
TATAAGGCACCAAAGCCAAAGTTCAATCCCTACTTGGCTCACAACACAAC
CAACAAATTCGACGAGAAATTACGTAATCTTCAGATGAAACGAAACGAGG
CACGAAAGTTGAATCACAAAGAGGTTGCTGAAGAAGACATGCGTAAGAAA
CTACCCAAGAATTATGAAGCCATGAGACGAAAAGCTGAATGGGAGGTGGC
TGATAAACAAGCAAGACAGGTAAAGTGGTGTGGTAAACATAAATAAATTA
CAAAAGACAGGAATAATAAGATACTTAATGATTAAAGTCAATGTTTGGCG
TAGATATCTAATAATCCTGTAATTTTAGATAGTCAATTGTTTTCACGGGG
TCCACATTCAAACGTCTTTGTTCATAGGTACTGAACAAAACATTAGAAAG
AGCAATTCCAACTGCAAACCCCTGGTTTACAGCGCTGTCACCTTGATCAT
TCGGTCATTGCTACTTAAATATTTTGGTACTCTCAAGTTACTCTGAAGCG
CATAATAACCCACTCCCCCTACGATTATTGATTTTCAAAGTTGCCTCCTT
TATCAGGGACCTGAGAGCTTTCTGTTTGTTTCTTTAGGAAGCGGAAGAAG
CAGGGGAAGACTACGAACGAGTCAAGATGCTTGGTGAAACTGCCGAAGAT
GTTGAGATTACCGATCGAAGAAAAAGGAAAAAGAAAAATATGGACCCTGG
GTTTTCAGGTACGATATCTTAGAGCTAGATTGCAAAAGCGACTCAATCAA
ATATTAGCTGGGTTCTTTAAAAGTTTATCCATCCCTGGAAAGACTGACTA
GCTTTTGACTAAACCTTTTGTTTAGGAAACTTTTTGTTCGTTTTTTTACG
AAATGCCTGGAAGTTTATTTATGACTAAAAACATAAAAACTGGGGCTCAT
TTTTTGTGCTGCAGTACAAATGCTAAAACTAGATTTCAACGTAAGAATAT
AATTTTTTTAACATTTAAAAATGTTTTTAACATTTTGATTTTTGGAAAAT
ACATATTTATGAATATAATTCTTATAATTTTTTAATTAATAAGTGTAATT
TTAATAAAATTGGATACTTTTTGCTAATGCTTGTTTGCCATTTTATAGAT
TATGCTGCAGCACAATTCCGTCAATATGAGAGGTTAACCAAACAGATGAA
GGCGGATGATGACGAATACGAGAGGAATAAACAAAAAATGTACGTAAAGA
CACATTTTTTTTCATGAGTGGATATATTGGTCTTAGTACATCCAAAGTAG
AGTTTGGGTCCCCTGTTTATCAGATTCCTCAAAAAAGTCTTCAAAACTTT
CGGCCCAAAGACATATTTCAAAATTGATCTACAGTATGGTAAAATCTTCA
TCGTACATTGTCGTAATAGTAACCGGTCTTCATGGTCTCTTCTAGCCTGT
GCCACCCCACTTACGTGCGGCGCAAATTTTAAGGCTTTACATTTTCTTGC
TTGGGAAAGGTTAAAGATTCGCCTCTAACCTTCAGCTTTTAACACAATGG
TGCAAACTGTAGTTTTGTAAGAAAATTGCGGCTGGTCAACCTTTGTATAT
TTTGTTATTATCACTCGTCTTGTTTCCAGGGGTGACAATAACTTTCCATC
AGCGCACAATTTAATGTACGGCACCGAAGATAAAGTATCCGAAACCGGCA
TCGATCGTATGGTCAACGATCTTGAGAAACAGTAAGTGAAACGAATTCTT
TTTCTTCCTTTCTAACATATTATTTGGAATTACAGTTAACGCTCTCTAAT
TCGACGTTCTTCTATTCGATAAGCTCCCATATTCGATGAAAATCCAATTC
CCCTTGAAGATCGAATTAGAGAGCGTCAACTGTATATACTTCCGACTATC
TTGCAAAAGGGATCTGTTTCTCCCAACATACAGTCGACGCTAGTTCAAAT
CTAAAGGGGAATCGGATTTTTTTCTGGAGCGTATCAGATAGTGAGAAGTG
TTCTTAAACCTATGAACTGACTTTCAATTTCTTCGAAGCCGAGAGTTTTT
TGAGAAAAAGAACTGTATCTTTTCGAAAGTTTTCTACCCAATTAGTTACA
AAAGATTCAAGATATTCTAAAATATTTTCACGACCAAATGTATTTCTGAG
TACTCAAAGTTTGGTTGTTTGTTGATCCTTAAAAGTTTGATAACAACCTT
CTCAAGTCTTCCTCGTTGTCTCCTTTTTAGAATCGAGAAGCGATCGAAAT
TCCACAGACGCCGACAACACTTCGACGAAGCCGACATCGATTACATCAAC
GAAAGCAACGCCAAATTCAATAAGAAGGCTGAACGTTATTACGGGCAATA
TACAGAAGAAATCCGACAAAATCTGGAAAGGGGTACTGCTATCTAA Coding sequence (CDS) from alignment at sc0000358_pilon:98552..101247- >XLOC_029553 ID=XLOC_029553|Name=XLOC_029553|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1836bp|location=Sequence derived from alignment at sc0000358_pilon:98552..101247- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTGAGGAAAAAGAATCTGGCAATATTTGGCCTGAACTTGACCTAAC
AGACTCCGAAGATGAAGAGACCACAACAAAATTAAGCAAAAGGAAAAATA
TCTTAATCGAATGTGCACCTGAAGTTACAAAGGAAGAAATTGAAGGTGAT
TTTCCAATGTTTTTGAAGAACAAAGATGATGGCCAATCGTCTGATAGTGA
AGAAAGTGATGAAGAAAAAAAAGAGATGAGTGAGGAAAAAGAATCTGGCA
ATATTTGGCCTGAACTTGACCTAACAGACTCCGAAGATGAAGAGACCACA
ACAAAATTAAGCAAAAGGAAAAATATCTTAATCGAATGTGCACCTGAAGT
TACAAAGGAAGAAATTGAAGGTGATTTTCCAATGTTTTTGAAGAACAAAG
ATGATGGCCAATCGTCTGATAGTGAAGAAAGTGATGAAGAAAAAAAAGAG
GCACCAAAGCCAAAGTTCAATCCCTACTTGGCTCACAACACAACCAACAA
ATTCGACGAGAAATTACGTAATCTTCAGATGAAACGAAACGAGGCACGAA
AGTTGAATCACAAAGAGGTTGCTGAAGAAGACATGCGTAAGAAACTACCC
AAGAATTATGAAGCCATGAGACGAAAAGCTGAATGGGAGGTGGCTGATAA
ACAAGCAAGACAGGCACCAAAGCCAAAGTTCAATCCCTACTTGGCTCACA
ACACAACCAACAAATTCGACGAGAAATTACGTAATCTTCAGATGAAACGA
AACGAGGCACGAAAGTTGAATCACAAAGAGGTTGCTGAAGAAGACATGCG
TAAGAAACTACCCAAGAATTATGAAGCCATGAGACGAAAAGCTGAATGGG
AGGTGGCTGATAAACAAGCAAGACAGGAAGCGGAAGAAGCAGGGGAAGAC
TACGAACGAGTCAAGATGCTTGGTGAAACTGCCGAAGATGTTGAGATTAC
CGATCGAAGAAAAAGGAAAAAGAAAAATATGGACCCTGGGTTTTCAGGAA
GCGGAAGAAGCAGGGGAAGACTACGAACGAGTCAAGATGCTTGGTGAAAC
TGCCGAAGATGTTGAGATTACCGATCGAAGAAAAAGGAAAAAGAAAAATA
TGGACCCTGGGTTTTCAGATTATGCTGCAGCACAATTCCGTCAATATGAG
AGGTTAACCAAACAGATGAAGGCGGATGATGACGAATACGAGAGGAATAA
ACAAAAAATATTATGCTGCAGCACAATTCCGTCAATATGAGAGGTTAACC
AAACAGATGAAGGCGGATGATGACGAATACGAGAGGAATAAACAAAAAAT
GGGTGACAATAACTTTCCATCAGCGCACAATTTAATGTACGGCACCGAAG
ATAAAGTATCCGAAACCGGCATCGATCGTATGGTCAACGATCTTGAGAAA
CAGGGTGACAATAACTTTCCATCAGCGCACAATTTAATGTACGGCACCGA
AGATAAAGTATCCGAAACCGGCATCGATCGTATGGTCAACGATCTTGAGA
AACAAATCGAGAAGCGATCGAAATTCCACAGACGCCGACAACACTTCGAC
GAAGCCGACATCGATTACATCAACGAAAGCAACGCCAAATTCAATAAGAA
GGCTGAACGTTATTACGGGCAATATACAGAAGAAATCCGACAAAATCTGG
AAAGGGGTACTGCTATCTAAAATCGAGAAGCGATCGAAATTCCACAGACG
CCGACAACACTTCGACGAAGCCGACATCGATTACATCAACGAAAGCAACG
CCAAATTCAATAAGAAGGCTGAACGTTATTACGGGCAATATACAGAAGAA
ATCCGACAAAATCTGGAAAGGGGTACTGCTATCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000358_pilon | genome | sc0000358_pilon:98552..101247 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 754-918:166 |
| Aaloc | 652-750:767 |
| Aaloc | 562-648:1247 |
| Aaloc | 439-558:1760 |
| Aaloc | 226-438:2341 |
| Aaloc | 1-225:2697 |
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