|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000358_pilon:26577..34591+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_029536 ID=XLOC_029536|Name=XLOC_029536|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8015bp|location=Sequence derived from alignment at sc0000358_pilon:26577..34591+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTCACTCAATAACCCCTGAAGATGACATGAAGTTATTTGGTAAGTG
TCGTTTTTAGATCCATCTCCTTCATTTCAACTCAAAAAGTGCGTCTGTCA
GTTGaaaaaaaCATCATAGGAAGAATGAATGGGCGGTTCCCAGTtatgtt
tacaattttctttttaaaaaattcaggATTTCCATAGCATAAGGATTCAA
GAATTTTTAAGTGCTGTAGCTAGTTTCGATACTAAGCAAGAAAATAGtgc
aaattttatggattttctaaTTCGTATGACCAAATAATTAGGAAAAGCTT
TTAGGAAAGTCCTGCTTTTTCTGGAACCTTTGTTAAAATTTCTCAGCAGA
gtttgggccattccagaatttgagTCTGTAACAGGCAGGCttaggagggg
gggggggggcggacgGACGACacagtaccgtgagattgggtaacttgcat
cgtggaggcaaacatgcatagccctcaaatgaatgacctgtctggtcagt
caggacctcatttcactttatcgatattacgcaaacggcagtgtgcgcta
aataatcttggtttcgctttcgatttcaagcaaaggtcttagcaacagga
cgcgcgtacatagcaacagggctgggtagaaaaatctaaacatagaattc
aaaaaaaataccgatcatcgtatagagcactaaaaaatactccctttcta
tgtttagtttgttctaccttggattataacggaaaatatcttcaaaaaaa
ccttcgtccgctatcagccgcgcggtaatctttgcccgctccaattctta
gataatgaataagagaggtgcacttagctaagccgtgctcgcgggcgata
aatttatgtttacttatcttgtatattttagtggtatttatccaatgaaa
aggatgttgacaaaatatgcacggcgctgacacatatgcacggcattgat
tatgacatcattaaatatgtcaatgtcgattcaacgcccgttaataataa
taattcgtagatagtactttttatcttgaaatttagaaatacgagaaaaa
aaagatcaaatttaatatttgtttcctatctagattatattagcgttaga
atacggtaaattttcacgaaaaatatttcgcgatggcggtacgcccaatc
gcgcccacgggaaagttccaatttttaattatcaggaaatcggggaaacc
ggttcacaacgtggataaaaaacgtacggaatgaaacctgacaaaaggtt
ttcaaccagatttattcagataaagctataaaaggttcattacttgtgga
ttttaaaacctacataagcaaaaacgaaagttgttgggaaggaaagagta
aacgcaagacagaaggtttggttgtgttgatcaggtatgtttttattcta
tccgaactaatgttaaaaaagaccaaagaggtcctgactgtgtctggtca
ttaaaatacaaagttaaatcaaaacaaaaatggtagagtagatctGCGAG
caaagctgcgtagttcattagttcatttgttttgaaatttttctgctttg
atATTggccagtatggattccacgaaatctcgcgccgaagatatttttcc
gtgcagcaagcctcacgccaagcaaaatttcttttgtaccaacattcaat
ttttcaataagggtgcaagatgggaaaagaggcgcatgcgccaacataat
taataaattgacgcgagcgcaagcgagcgaaagcaaatttagccaaacgg
aagctaaaaatctaaaaatcgatggattatggagtcattcacgccgagct
ggaattattactttacgccaactgaaaatcaaacaatctttgtaagtacc
cttacgccaatgcgccaaaaacgtttcagttgtacgcTGAAGAACTtcgg
cgttagttacacgaaatccatactgggatattggtcagtcatttgatggc
tatgcaaatTTCCCTCCCCACTGATGCAATTTACCGACTTCACGGTATTT
CTGTTGAGGGCACAAAAGTTTtcgacaaaatttgaaatttccaaggcaag
aGAAGAAAATTTGTGAAATTCCAAGGcagttgaattaaaaaaggcaaaaa
agagtggaatttctgaTGCATTTGGCAAAAGTATATACATGGATTTTCAT
ctgaatttccgaccaccaccaCTGGCAACTAGTCActctagcgtcccgcc
aaaatgcctATCAGAGATTATTGCTGCGAAAGCGCTTTATCGTTtgcttg
actctcaagcaaaaaaatgcggcaaaaaacttctaaagggattcatgcaA
AAATACGGGTTATTTatggctttttaatgaaattaacattttcaaaaact
ttgagaaattgcctaaaatttgagccatagatgaaaaaatttgagccaag
ccaaccttgaaaactaatttgaagatcaacttcccaagaaaaagatctac
gggggaggcagaacccacctagatccgcgcaccaccggaaattttgccgg
acctcaaataatgacccatttacatatgcggaattattttttctttagcg
tataaaccaggccttaaaaatcgaagcgctgtctcgggaattgaatgaca
aattttggtaggttgattttggctgctgcacgatttattttgtttcaaac
tttcaagttttaattaattgtcttgcgaactcgattcaggtaactctcat
ccttgttgtgcaaatacatcctgtagatgactgatgttgttttttctgaa
agctagatttcctagtgtgactaactgactggaaaagaaaaattatttct
gaaactagaaaaaattagaaaatgcacgtcgtccaaCGGGGTAACAAAGA
TTTTCTGGGATGGCCCTTTCCAAGTgtaaaataatccaaaaaacAGTAGT
GTCGTGCGTGGTCCACAGGGGGGTAATggtttttggtaatttttttggAG
CTACACAATGGATTTTCAAACTATGAGTCGGGCAAAAATCTAAACAAATT
TATCTGAGCTGTGATAGTATGTTCTTTCtacatgatattataccatgctg
aaatttttttgccaaaaaaagatcgcttttaaaagttaaaaatctgaaaa
cccactttccctaacccctcgcaggcaaaaacacgttcgtttacctccca
aacaattttatacacaacagtGTATAATTTTTACAAAGTATATTATTTTT
GGATTTATGAGAAAACAAATGTTAATGTAAAGATATATCATTCAGCGGTG
TTATTAGACCCTTTTCAGGGAACTGGACCCCCATTTTTCATgtcagaatt
cattgccagtaATGCTACAGCGTGGTTTGAAACTTTGCTGGTGCTTTGCT
GGTCAGAAAGTGGATTTATTTGTGAATGTATAAACATTACTACAGCTaga
atgttttctttgtttttttttatttcactgcATTTTTGTCTTATTCTGTT
TTAGTAACCAATTGAAAACTCTTGATCGTTTCTTTGTGTCAGTGTTCACT
TGGCTGTCtttttttGGATGTTTGTACTTAGCAAtttttttGCCTCTACG
aatttgacgaatttttccTGAGCGTCTGTTACCCGTGGCTGGGACCGCCA
CTTATGGCTTTCTTTGATAGACTGGGTGGCATTACTGcctgataaaaaaa
caaagtgGCCCAGTGTATACATATGGaataaatttttggttttgcttGGG
TAGCTTGCTAATCCATACAACTTTTTACAACAATTTTGAGAAACATTTAt
agtttcaaaaactttggatttttggaatttatagtttcataaacttcAGA
GTTTtggaatatatattttatattctattgttttggtgtttttatgtagg
ttttaaaaacaaaagtgaaacaTTCCAAAGATGACAACAAAATCCTCTCT
AGTCTTGTCTCTACTAGTCTTCACTGGATGAGCTACTTCACAAAATTTGC
TTTAATTTGAGCAAATATTTTAACTTGAGTAAATATTTAtgtttaataat
aataaaaattccaagcaaaaattttgtttaaatctgCTCAATCAAGTAAT
TGCTCTATGAAAAGGTTTTATGGATTGGCAATGTTAAAGAAAAATGCTAA
AAAGATGAAGTCTTCTTAAAATGATCTCTGGTATATGCTAATTGCTATAT
TTAACTCCAAGAACATGgcgtcaccccccccccccactttaagtgggggt
acctaaaaaaaaaggtgtcaaaaagcCAGGTATATACCTGGAAGTATTCC
CACtttcagggggtacctgatatgtttAGGGGGACCTGTAATCTCGTCAG
TGAGGGTGGGGGCTGTTTTTTCTGTGTGAgatatttttcttaactttacA
CAATCTCTCAATTTTCAACCAAACCCTTCGTTTTTactactttttctttc
ttgtgtCCTTTACATTTTACAGTAGTACCCCAGTTAAGGAGAttaaaatt
caacaattttttttttttttttttttttttataaatagaaatttGTAGTT
TGCCCACGGACGTGGAGTGGTTCAATTtgagtaaataaataaataaataa
cgaTATTGCATTTTTGTCACCCCAAAAACCTTTAAGATTtcaggaatgac
aaaagagcaGAAATTCTTCTAATCGGCTACGTAATAaaagggggtaccta
aaaacATAATTCAATGGGGGTACCAAATCCTGGGGGCTACCTAAGAATCC
AAACAactttgggggtacctaaatcgttgggggtacctaattttattggg
ggtacctgaatcctggaggaccctatgaagaagtttttgaacctacctcg
gaggtcctttaatttaacctttAGACGTGCTGCTCTTGCTTCATTAGTTA
aaaggcaaggttctctaaaaagtggatAAAACcgttttttccagaaaaaa
ttagCATTTCTTGCAATTGCAATTgcaacttgggtctgcattgagagTTT
GCTgatgttggaaatgttcatgacgttcaaataagatggacaaactgttg
gcaaaatataagagaaaaaggaacaaaaaaacaatgaaattgtatttttg
tcattttgtcttatttttagcgtgattgatgtttttaatgattctttgaa
atttcgaaatggaaaaaagtcagttttttggaaataactttcgaactact
ttttcaaatttaatgtatgatagctcaaaattcaagttagagcatcctct
aaacaataaaaaaagaacaaacaaaaaatttaaatcctgaagctcacaat
atctcgacaaacctgtatactttttttttggtgtaCCCGGGTATgtaatt
ttaatatttcattACCTTGCCCATGTTTGTATGATTGGTAAAAAAGCTCA
TTTTAGAGAAATCAAATAGCTGtattttattggacctaccttggaggtct
tTATTAACCCATGTCTGTCTGTTTGTTCTTTCATTTGTTCATCTGTTACC
ACAGCTTTCCTTTGGATTAGGTCATTAGtttttttGGCACAAcaatgcaa
aatgacaatgcctaaaatgcgacggagcccaatttttgaaaaaaaaaacg
tttttggtccaaaaaccagccaaaaaccacccaaaaaTAgcgttttttgg
actttgtgtgaagttggttcattagatttttctgattttttccagAAAGA
TAGATATTACCGTGTTCTAAGAAATGGCGGAGAcaatttttcccagaaaa
ttctTATACGCCATGTGACTCTTTTGTGACCCTTTGACTCTTTTTCAAGC
TTGCTTCAAGTCAAAATAATGAGCTTCTAAAAGATTACTGCTGCAATGAG
TTTTTCTTTGCTAAGATAGCAGATCAAACAAAGCACATTTCCAATTCAAA
ATTGTGGACGACAGTATTGTTTTCCTATCACCTTTTTAACCACTCAcgca
tagtgtgcaagggggttccaggtcccacctgaaaattcaggtcccacctt
atccccagactcccagatcccagctaaaaacaaaaattcgaggaacaaaa
caaaatttctttaccgtaatatgaagatgcaatatattacatatgtttaa
ctttccatttgcctatgacctacattaggggtagaaaccaatcaagtagt
cagacggcttagaagtaagtgtgagtcggtagatataagtttggcatgaa
attatggctaatcctcgaataagaagttttggggaaaatttgtcccgata
actacaatattagtataaataagtgaggatcgcctacaatcataactgca
gggagggagggaggtaaaatatttcatcctatcagctttcagttagagcg
ttgacttgaacagggagatgtgatggccattttgaagatgacgtcacatg
gctattagcaaagtagactcagatggcggagggcggccacccagccattc
gaatactgtatatagcgcttatcaaataaaagttaagccacaatttaacc
tgtgttaaatccaaaatatattatgtctattatatacatttatgaagtat
ataaaaaaaatgtatcataaaatcataaaatctgaaaataagaaatttta
cttttaactttttccaaaacacccaaagtcccaccaaagtcccacctaaa
gaaattaactcccaccttaacttgtttctcccacctaaaacctggaaaac
cccaaatcccacctgaaaattttcgacccaaatcagcaaacccctccccc
cactattctgggggggggtgcacactatggaCTCAGTGATGAGAGATGTg
ctttttatttgatattttcttctCATTATGCTATTTTGATTCTGTGCTAG
ACATTATTATTGTTCTTTTCTAGTTATTTTTTATCTGACTCTCATCATAA
GGTAGGTCTGTTCAGCATGTGGCTTGTTGGTTTTAGCTTCatcacttttc
aaattttgttcctatttaaatttttaatagaTAAGAAGCAAAGTGCAAAA
CGTTTTGCGTACAATGGAATGAAGAGCAAAAAGAATAGTTGGGATCAGTT
TGAAGAAGATGGAGACAGTGAGAAATTTGTTCAACAAACCAAAATAATGT
CTCCTAATCACTTATCACATTTAGGGATGAAACACAATCAACGTACGAAA
GGTTTGTCTAACaaaaaaaCCCTGCAATTTTTAAATCCGTCCCTCCTTAG
CTAAAGTTTTAGTCTCCAATATGAATCTtattacagattttttttcgatt
tgatATTCAACCCTTTGATTTTCGATTCTTCACAGCTAACTATTACTAAA
ATAATCCGTCCAAATAATCCAAGCGTATCAGCATTTCTATCTTCCTTTAT
GGTACTTTATGGCACTTTATGGCTTATGACtttttttACGAAATTTCGGA
CCCAATCCACTCCTCTATCTTCTTTCTTTCCAAAGACATGATTGACTTGG
ACAATGTATGGAGCATACGAAATGTTTCTTTAAAGGCCAACCAATCAGAT
TCCATATCGAGTAGCAGTCTGGTCAACAAAACAGATACTTATTCACGACA
CAAAGGCTTATTTTCACCTCTTGCAAGTTAGTGAAATAATATGCGATTAT
TTTTCCTTAATTATACTGAGGTATCTTTCAGGGTCCTATCAAACAGTTGT
GTTGATCTTTGCCAATACTATTTcagtttttatgtttttttgttgatatt
taGTATAGAGCTTATATATCTTCTATTGAACCAATTTTGTTCCATGTTTT
GCTTGAactgtaaaatttttgaaatttctcaaaaatttactaaaatcCAG
ACTAAATAGTAATAGTATCATACCATTAATAACATTATCGCTATACTTAA
AACATCTTCTGGCAAGTTATCTTGTAGACAATTTCCAAACTATGTTACTT
GGTTTGATTATTTCAGGGAGAGATTCGGGTCAGCGTTCATTTTTATcaca
aaaacaacagcagcaatcaagtcaaccacaaccacaaccgccgcaaccac
caacacaacGCTTACACTTATCATCTCTTAGCTTTCAAAAGAAGAAGCCT
AATGGatacttttga Coding sequence (CDS) from alignment at sc0000358_pilon:26577..34591+ >XLOC_029536 ID=XLOC_029536|Name=XLOC_029536|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1008bp|location=Sequence derived from alignment at sc0000358_pilon:26577..34591+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTCACTCAATAACCCCTGAAGATGACATGAAGTTATTTGATGGTTC
ACTCAATAACCCCTGAAGATGACATGAAGTTATTTGaTAAGAAGCAAAGT
GCAAAACGTTTTGCGTACAATGGAATGAAGAGCAAAAAGAATAGTTGGGA
TCAGTTTGAAGAAGATGGAGACAGTGAGAAATTTGTTCAACAAACCAAAA
TAATGTCTCCTAATCACTTATCACATTTAGGGATGAAACACAATCAACGT
ACGAAAGaTAAGAAGCAAAGTGCAAAACGTTTTGCGTACAATGGAATGAA
GAGCAAAAAGAATAGTTGGGATCAGTTTGAAGAAGATGGAGACAGTGAGA
AATTTGTTCAACAAACCAAAATAATGTCTCCTAATCACTTATCACATTTA
GGGATGAAACACAATCAACGTACGAAAGACATGATTGACTTGGACAATGT
ATGGAGCATACGAAATGTTTCTTTAAAGGCCAACCAATCAGATTCCATAT
CGAGTAGCAGTCTGGTCAACAAAACAGATACTTATTCACGACACAAAGGC
TTATTTTCACCTCTTGCAAACATGATTGACTTGGACAATGTATGGAGCAT
ACGAAATGTTTCTTTAAAGGCCAACCAATCAGATTCCATATCGAGTAGCA
GTCTGGTCAACAAAACAGATACTTATTCACGACACAAAGGCTTATTTTCA
CCTCTTGCAAGGAGAGATTCGGGTCAGCGTTCATTTTTATcacaaaaaca
acagcagcaatcaagtcaaccacaaccacaaccgccgcaaccaccaacac
aacGCTTACACTTATCATCTCTTAGCTTTCAAAAGAAGAAGCCTAATGGa
tacttttgaGGAGAGATTCGGGTCAGCGTTCATTTTTATcacaaaaacaa
cagcagcaatcaagtcaaccacaaccacaaccgccgcaaccaccaacaca
acGCTTACACTTATCATCTCTTAGCTTTCAAAAGAAGAAGCCTAATGGat
acttttga
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000358_pilon | genome | sc0000358_pilon:26577..34591 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 358-504:7869 |
| Aaloc | 217-354:7388 |
| Aaloc | 46-213:6933 |
| Aaloc | 1-42:1 |
|
