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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000350_pilon:200093..204642- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_029370 ID=XLOC_029370|Name=XLOC_029370|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4550bp|location=Sequence derived from alignment at sc0000350_pilon:200093..204642- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTGTCGTCTTCCCAAAGAAATATAAACTCGTTTCTTTGGGTGAACA
ATCAGGTAAGGATTTCGTCATTCTTCTCGTTGAGTTCTCGTGGCGAAACT
TTAACCCTCAGGCAAAAGAAATTGAAGTCACTTTTTTCCCAACCAAAACG
CGCATAGAACGCGCCGTAATCATGACGACGGATTGTATCTAGCGGTTTCC
TTTTTTTTTGGAGGACTACATTTTTTAAGATCTAGCGATAGATTTTAGTT
TCAATTCGGCGTTTGTGTAAAGACTACGCGCAGGCGCTCTTGATGGGAAA
TGGATGGATGGTTTTATTACCCATTCAGGAGTCTCACCCCTAGCCCTAAG
GGCTTGAAACTCAATGATTCTCCTTGGTGGGATGTGGCCTTGATTGGTGT
CGGTATAGTCGATGTGGCCATGATTGGTGTCGGTATAGTCGTTTAGGAGA
ACATGACGCTCATTGAATAAATAATTACTCCAGCATAACACCCCTATGTC
ACAGACCCACTGGAGCTCCAGCCCCACTGGGAAATTTGGTCAAAACTTCG
TCCCCGGTACTAAAAATACCCCAAAATTTCAGCCCACTGGGAAATTGACT
TTGATTACATCCCCATTCAAATTTCACTGTAAGAAATTGCACTCCCACAA
GATTTTTTAACCTTGGAACAATAGAATTTCTATCCCCATTGGGATTACGA
AATAATTTTTATCCCCGCTCTGGGAAAAGTTTCACCAGGGCTGTGAGACA
GGGGTGTATCATACATTACTTTCATTCAGCCATTAAAAACAGGATATATC
GGGCGCGTTCACACTGGAAAGTTTACTTAATCAAATCTATCAAAGTTAAA
CAAAGAGGTTTATGATGGATGAATACACTGGTTTATTACAGTTCTTTGTA
GGGTTCGAGATCTATTATAACACGGTAATTGATTTTGCTTAAGGCTTCTC
ATTGGTTGATTTTTTATTAAGAGTTTCGATTTCACCTGTGATTGGTTGAT
ATTGGTATCCATACATCACTTGAAATCCGCAAACATATTTGTTCTAATGG
TTTTACTCAATAACTGCATTCATCTTACACATCAACAACACCGTTTGCAC
TATTTCTAATTTTTTCCTCAGTTCATTCGTTTTTGAAATCGTAAAACTTT
TTGTTCACTGCACGCATTCTTTGTCTATGCTTCCTTAATAAAATCTTTTG
TTTTAAGGGAAGCCTCTACCCTACCCTTAAGACAATAGAGCTTACGACTC
TTAATTAAGGAAGATCGATTAAAAATTACAATACTACGCGTTCGACTCTT
TGTTAAATGCACGTTCTGTATTGTAGTCAACAAAAGATTCTCCTAACTAC
ATTTTTATTAAGGAAGGTCTGTAGTGTGAACACGACCATCATCTTGTTCC
TAGTTGTGTTGTCATTAACAAAGTTTATGCTTGCGTAATTAGTTATTCAA
AAGACCGTCGCGTTCTCCCAAACGACTATTAGCTCTCGCGCTCTCTTTAT
TCTGAGAATGTCTTTGACATTTAATTGGTGGACCTTCACACTTTTACTTC
TTTAAGATGTTTGTATTCGATCTCGGAAGCACTTGATTTCGAGAAATATT
TTCATTTTTCAGTCGGCAAGACATCTCTGATCACGAGGTTTATGTATGAC
CATTTCGAAGGAAATTATCAGGTATAATTAAATTTTAAATCATGGTTAGT
TGTTGCCAATGCTCTTTGTATGGTTATTCCAATTCTATCCATGACTAGCC
AATACCGTCCCACTAAACCATTTTTCATTTGTTTTATGAGAAATTTGTTT
TCGTCTAACAGGCTAATCCATGGCTTGCTATGTAGATCCTCAAAATGAAA
ACTTCTATCCCAGTAACCCTATGGACTCTTAAACTTACTGATTCGGAGAA
GTGACAAAGTGATTTATATTTTTGTAACATTCTTTCAACTGTACGGTGGA
AAGCTAGGAGAATTACTGTTTTTATTTTTCATAGGCAACCATTGGTATCG
ATTTCTTGGTCAAGACAATACCTATAAACGGGAGAGCGGTAGGTTGGATT
GCTTTTGTGATGAATGTACTCCAAAATACGTGTCTTTTCTGCATCTCAAA
TAGCCTAGTCTTCTGTTCATCCTCTAGCAAAAAGGGTTTCTGTAACAATT
TTATATTATTTGTTACAAACGGTACGTTTGATTGCTTTTGTGATGAAAGC
CCTAAGTACGTAGATTCTCAAATAAAAGCCTAAGGCTTCTGTTCATCCTC
TAGCGAAAAGAGTTTCTTATAATTTGTCGATATAACGATATATAACGTTA
ATTTGTCGGCATAGACACCTTCTACTACTTAGCCTAGGCTATTTGCTTTC
TACGTTATCTTCCAATCTCGAGCAAACTTCCTGACATCTAAATATAATTT
CACCTTCTTTATCTCGAAACAGGTCCGTTTGCAACTATGGGACACAGCGG
GACAAGAACGCTTTCGAAGTTTGATTCCATGCTATATTCGAGAGTCTGAC
GTCGTTTTAATTGTATATGATATTACGAGTAAGAAAACATATTTTTCTTA
ATCATTATCTCAAATCTTAGATTCTTCCATGCAAAGTGAACCCGATGCAT
TGGTGGTTGCCCAGGCTAAATCTCTAATAATGGGAAACGACCAATTTCCA
ATCGGAGAGAATTGATAGTCGGCATTTAATGTGCTGCAATTAACCCTTAC
ACACTGAAGATTACAGTTCGACCAAACGTCGGCCAGACCTCCCCACTGCA
AAGTCCGTTGAGCGATGAGGTGAAATTCCGTAATCCAAACCTTCCAGATG
GTCCTTTAGAGCTTTAGCGTGTCGGTAGAAAACTTCTAAATCAAGTGTCA
GATTTTAATTGCATTGTCATTAACGCGAGATAAAGTAACACATTGAGCTT
TATACAAAAGGCGTGACCGTGAAAGTTAGAGACTAGACCCAGACCCCCAC
AGGTGCAAGGTTGCAGGTGTTTTCTTCAAAATGATTTGGGTGTCAGCAGA
GTTGTTGAAATTGACGGGTGCTATAAAAAAATAACTTACCTTGCTACTGT
TATTCTTTTGTCACTAAGGTCGTGCTTCATTTGACCACACCCAAAAATGG
ATCGATGACGTCAAAGAAGAACGAGGCGATGACGTCATTATTTTATTGAT
TGGCAATAAAACAGACCTAGAGGAAAAAAGGTAAATTATTTTTTCGGCTT
TAGCTCTTAAAACTTGAATCTGACTTGAAAAAACAAAAAGCATTAAATTC
ATATAATCAAAGTTTGGGAAAATAAGATGAAGTAAGAAACTCCAGAAGAC
GCAAACCGTCGAAACAAAATATAACATTAAATCGCTACAGTGTCCTAAGT
CCAAGATACATATAGTCTGAATCGCAGACCTCTATAGATATACTTCCTAT
ATAGGTCTATTTAATAGTGTGCGGTCTGCCTTCCCGCTATGGTGGCTCTT
ATGGTGGCCGATTTTACCTTTTTTGGCGAGTTACGGAAAGGGACGAGTTA
TGACGAGTTAGAAAATGAAAAACTTTTTTGGCTAGAGGATGAGTAGAAAC
CTAACATACATACTATGCCCAGGCCAGCCATGTATATCATTGGAGATCTT
TTTGTTCCATTTGTGGAATGCCTTTCTTTAAGTTGAAGTAAGTAAGAGAA
GACCATCGCCAATCATTCGGGAATCTTCAACCCATAAAATTCTTCAGTTC
AGGATTTTTAATTTTTAACCTGTAAAAAGATGGAATTAAAATAATAGGTT
TCATTTTCAACAGTTTTGTAAGAACGTAACCTAACCCAGGTCAAAAAACC
GACCGAAAACAGGTTTTAATCACTGACCTTTATATACACTGGACCAAGTT
TCTCAATCCCAGCCGAACAAATATCTTTGATCGGAGTTGTTTTGAAGGTG
GTACCCTAATGGTAGCACTACTCAATAGCGGTCTAATCTACTTTCATGGA
ATACTTTTGATGATGTAGCGCCGTTAAACGTTAATCAAAGATGGCGCATG
AGACTTTGACCAGGGATATATGAAGCTCAGTGGTTTTAACTAGGGGAAAA
TGTGATTCTGAATATGATTCTTTTTTCAAATTTCAGACAAGTGAGTTGCA
ATGAAGCAGAAGAAAAAGCGAAAGAACTTGAAATCCATTTTATCGAGACG
AGCGCAAAGACTGGTTATAATGTCAAAGAGGTATGGTTTAAAAGACAATT
TTCAACAAAATATCCTTAGACTGTACACTCTACCAACAACTCTATCTAGC
AGACTGTGGATTTTGTCCAAAGCCTAGGGTGTAAAATATAACATGATAGG
GAACTGAACTGCTGTAGATAAAATATATAAGATAGGAGATAGATTGATCT
TTTGACAACTTTTGAACAGCATTTCCATTCACTAAAAAGAAATTTACTCA
TCACTTTCCCCTTTTCAGTTATTCGGTAAGATCGCGGCTACTTTACCGGT
ACCGAACGAAGATGAAGGTCAGCAAAAAGAAGAACATATCACATTGCTTC
CATCCAAGGATCACCAGGATGAATATGAAGGCTATTGTCAAGCTTGTTGA
Coding sequence (CDS) from alignment at sc0000350_pilon:200093..204642- >XLOC_029370 ID=XLOC_029370|Name=XLOC_029370|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1224bp|location=Sequence derived from alignment at sc0000350_pilon:200093..204642- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTGTCGTCTTCCCAAAGAAATATAAACTCGTTTCTTTGGGTGAACA
ATCAGATGAGTGTCGTCTTCCCAAAGAAATATAAACTCGTTTCTTTGGGT
GAACAATCAGTCGGCAAGACATCTCTGATCACGAGGTTTATGTATGACCA
TTTCGAAGGAAATTATCAGTCGGCAAGACATCTCTGATCACGAGGTTTAT
GTATGACCATTTCGAAGGAAATTATCAGGCAACCATTGGTATCGATTTCT
TGGTCAAGACAATACCTATAAACGGGAGAGCGGCAACCATTGGTATCGAT
TTCTTGGTCAAGACAATACCTATAAACGGGAGAGCGGTCCGTTTGCAACT
ATGGGACACAGCGGGACAAGAACGCTTTCGAAGTTTGATTCCATGCTATA
TTCGAGAGTCTGACGTCGTTTTAATTGTATATGATATTACGAGTCCGTTT
GCAACTATGGGACACAGCGGGACAAGAACGCTTTCGAAGTTTGATTCCAT
GCTATATTCGAGAGTCTGACGTCGTTTTAATTGTATATGATATTACGAGT
CGTGCTTCATTTGACCACACCCAAAAATGGATCGATGACGTCAAAGAAGA
ACGAGGCGATGACGTCATTATTTTATTGATTGGCAATAAAACAGACCTAG
AGGAAAAAAGGTCGTGCTTCATTTGACCACACCCAAAAATGGATCGATGA
CGTCAAAGAAGAACGAGGCGATGACGTCATTATTTTATTGATTGGCAATA
AAACAGACCTAGAGGAAAAAAGACAAGTGAGTTGCAATGAAGCAGAAGAA
AAAGCGAAAGAACTTGAAATCCATTTTATCGAGACGAGCGCAAAGACTGG
TTATAATGTCAAAGAGACAAGTGAGTTGCAATGAAGCAGAAGAAAAAGCG
AAAGAACTTGAAATCCATTTTATCGAGACGAGCGCAAAGACTGGTTATAA
TGTCAAAGAGTTATTCGGTAAGATCGCGGCTACTTTACCGGTACCGAACG
AAGATGAAGGTCAGCAAAAAGAAGAACATATCACATTGCTTCCATCCAAG
GATCACCAGGATGAATATGAAGGCTATTGTCAAGCTTGTTGATTATTCGG
TAAGATCGCGGCTACTTTACCGGTACCGAACGAAGATGAAGGTCAGCAAA
AAGAAGAACATATCACATTGCTTCCATCCAAGGATCACCAGGATGAATAT
GAAGGCTATTGTCAAGCTTGTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000350_pilon | genome | sc0000350_pilon:200093..204642 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 481-612:133 |
| Aaloc | 388-480:464 |
| Aaloc | 277-384:1481 |
| Aaloc | 169-273:2129 |
| Aaloc | 115-168:2567 |
| Aaloc | 58-114:2937 |
| Aaloc | 1-54:4551 |
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