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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000350_pilon:106974..109735- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_029368 ID=XLOC_029368|Name=XLOC_029368|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2762bp|location=Sequence derived from alignment at sc0000350_pilon:106974..109735- (Clytia hemisphaerica_ch_hm2_pilon)
GCTCAAGACCGCGCGTGGAAATTGAGGAGCGCTATTGACACAGTCTATGA
TGAATGTTTGTGTGATTACAATGAAGTTTCCGATGCCATGCCTTCAAATC
TTCATACTCGAATCAAAGATACCATTAATAAGGTATAGTGTTGTTTAAAA
TGTCATTGCAGTGGTGCATATCATGAATAGCGGTGTAAATGCATCGAGAG
CATTAGATCTACTTATGATGATATAGCGCCATTTGACGTTAATTATTAGC
ACTGTGATGTCCTCTTTTCGGGAACCACTTTCGAATAAACTGATGGCGGA
TTTAGCTTTATCCAGGGTTTATAAGTGGATAAATCCTGGGCTCAGATGCG
CTTATTTGAAAGCAGAAAGTAACAAAGGGATGAAGTTTAATTGGTTGTCT
GAATTCTCTACAGCTTTAACTGTTTTCGCATTCTGTCTTATGTACATGTA
GGCGTCAAGCAAAATTACATCAGGAGATCAACAACACGGCCTTACCGAAT
ACATCAACTTGTTAAAAGACATGAAAAACAATGACAAATATCGTGATCTG
ATCTCACCAGCTGCTAAAGTCATGGTCAACGAATCTCTTGAAATTGCTGA
GTCAGCAGATGATCTAGATCTGAAGAACAGAAAGTTAAGAGAAAGCCTGG
ATCGAGTTTATAATGAAGTTCGGCTGCCGGAAGTTTACTCGCCCAGTGTT
GGACCATTGGTGAGTTCTCTTTCACTCAAGTCTTATATTCCAACAATATG
TTTAAAAACATCCCCCCTCCCCCGCGAGACCGCTAAAATTATCGAGGCCA
ATTTTTATGTCAAAGATTGAAATTTTTCAAGATTTCTCAAACAAAATTTA
TTTCTACCTTTTCACTTGTTCTTCAGACTTGTATCTTTTTTTTTTGAAGA
GAGTGAAAAGCAGCATTTTTTGTAAAGAAAAACGAAAAACTATCCAATGA
ACAGCTCTTTTTTAATCAACGAACGTCATTGAGCGTGCTTACACAGCATT
TTTAAATTTTATTGTTTACTATGCTTTTTCAGCATAAGATCTTATAAAAA
AAGAATATCTTCAAATTATCGATCACAATTTTTTCTCATAGAAATCGAAA
AAACAAAAACCCAAAGACAGCGGTATGCTTGTAGTGGATTTCAACCAAGC
TGGAGGCTCCATGTTCTCTTATCAAATACAAATCTTAGATGATAAATGTA
TGGGTGGAAGCAGTCACGCCCAAGCTTTGTTAGAAGAGGTATAATCATTT
TGTTTCTCGTTTTTTTTTGTTGGCTTTTATTCAATACACAGGTAGTCTAG
ATCTAGACTAATAATTCAAACTTCCAGGTCTATAATCAGCTTCACCTAAT
TATCAAACACTAAAAGGTGAACAGTACTGCAAAAGAGAAGTGCGCTCGTC
AAAAGAGGAAAAACTATTTAAAACACTCTCTCGCGCGGAGAGAGTGTTTT
TTTATGGCAGACATACTCCTATTTTCTACTTTGTAGGAGAAGCTGGGAGA
AGTGCCCCTATTTTGTGTAATAAGAATAATGGTCTGGAAATCGAGACTAA
TACACAGGTTGCAAAATCACGCTTTTACTCGAAATTTTTATGTGCTTGTT
ACATAACATTTATTTCTGATTAGTTCGAATTTATTGACACTATTGAATTT
ATCAGCTGTAAGTTGTTAAAGCAAGTAACATGGGAATAAAATCACATGAA
CTTTTTCGAGTAATCACATGTTTTGACTTCATTGATTTAATTATTTTGCA
ACCCGCGTATTTAGGGAAATTACAATGCTACGATATCTGTTCCTTTTACT
TGCAGAACCTTTAAAGGGACGTCTTCATGTGAGACTGATTTAAATATACC
GACTCGAAATTGAAAAATTCGAAATATTAATCGCTCTCTGGATTTTTCCA
ACCGTCAACTTATCAAAATACGGATAGCTTTTAAGTTTTTCAATTTTTCG
GGAAACATATGCATTAGATTTGATTTATTCTACCCTTTTTCGGTTGTTTT
CTAGATTTTTAATAGTTTTATGCTGCCTTTTTAGCAAAGTTGCTAACCGA
ACCTACTTTTTGACTTGCACATCCCGTAAAACAACAAATTTGACCTCTTC
TCGTTATCCACATCCCATTCGTTCCATCTCGGGTGTATTATCCATACATT
CCTCTTGCAGTAAACGAATGTTTGAAGTCTTTCGAAGTCATTAGAACTGT
GAGTAGTGCATGATTGAGGCTTTCATCTCTGTCATAAAATATAGTTTCTA
GAATATACCGAAAGTGATTTTTTCAAAGTAATTTTGTTACCCTTTAGGAG
AAGAAGTATTTGAGTTTCCATGGTAACCTAGCAAGAACAAACCGGGGTGG
ATTTGCCAGCTTTCGGATTTTACCCACAGTGAAAGACGAGTTTAGGGGCA
TTCTGAAAAACACCAAAGCCGTCATGCTCGAAGTCATGAATTTGGAAAAA
CAGAATATCCGTTATAAATTCCAAATGGCGAACGAAGCTCATTTGAAATC
GTTCAATTGGCAAGCTGAATTTATTGTGGAGCCGGATAATCAATTCCATA
CGGTCGTTATCGATGTTTTGTCGTTTTGGCCGACAATGTTCGGTCATGTA
TTGTCGTCACCCGGAAATGTCGATTTCTCGAAAGTTGATTGTCTCGGTAT
TCTAATCAGTCATGTTACTGTTGATGGAAAGGAAAACCCGGACTTTGTGG
AGGGACCCTTCGGCCTCGCCGTGAGGTCCATACGTCTTATTAAGAATAAG
GATGATGATTAA Coding sequence (CDS) from alignment at sc0000350_pilon:106974..109735- >XLOC_029368 ID=XLOC_029368|Name=XLOC_029368|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2004bp|location=Sequence derived from alignment at sc0000350_pilon:106974..109735- (Clytia hemisphaerica_ch_hm2_pilon)
GCTCAAGACCGCGCGTGGAAATTGAGGAGCGCTATTGACACAGTCTATGA
TGAATGTTTGTGTGATTACAATGAAGTTTCCGATGCCATGCCTTCAAATC
TTCATACTCGAATCAAAGATACCATTAATAAGGCTCAAGACCGCGCGTGG
AAATTGAGGAGCGCTATTGACACAGTCTATGATGAATGTTTGTGTGATTA
CAATGAAGTTTCCGATGCCATGCCTTCAAATCTTCATACTCGAATCAAAG
ATACCATTAATAAGGCGTCAAGCAAAATTACATCAGGAGATCAACAACAC
GGCCTTACCGAATACATCAACTTGTTAAAAGACATGAAAAACAATGACAA
ATATCGTGATCTGATCTCACCAGCTGCTAAAGTCATGGTCAACGAATCTC
TTGAAATTGCTGAGTCAGCAGATGATCTAGATCTGAAGAACAGAAAGTTA
AGAGAAAGCCTGGATCGAGTTTATAATGAAGTTCGGCTGCCGGAAGTTTA
CTCGCCCAGTGTTGGACCATTGGCGTCAAGCAAAATTACATCAGGAGATC
AACAACACGGCCTTACCGAATACATCAACTTGTTAAAAGACATGAAAAAC
AATGACAAATATCGTGATCTGATCTCACCAGCTGCTAAAGTCATGGTCAA
CGAATCTCTTGAAATTGCTGAGTCAGCAGATGATCTAGATCTGAAGAACA
GAAAGTTAAGAGAAAGCCTGGATCGAGTTTATAATGAAGTTCGGCTGCCG
GAAGTTTACTCGCCCAGTGTTGGACCATTGAAATCGAAAAAACAAAAACC
CAAAGACAGCGGTATGCTTGTAGTGGATTTCAACCAAGCTGGAGGCTCCA
TGTTCTCTTATCAAATACAAATCTTAGATGATAAATGTATGGGTGGAAGC
AGTCACGCCCAAGCTTTGTTAGAAGAGAAATCGAAAAAACAAAAACCCAA
AGACAGCGGTATGCTTGTAGTGGATTTCAACCAAGCTGGAGGCTCCATGT
TCTCTTATCAAATACAAATCTTAGATGATAAATGTATGGGTGGAAGCAGT
CACGCCCAAGCTTTGTTAGAAGAGGAGAAGAAGTATTTGAGTTTCCATGG
TAACCTAGCAAGAACAAACCGGGGTGGATTTGCCAGCTTTCGGATTTTAC
CCACAGTGAAAGACGAGTTTAGGGGCATTCTGAAAAACACCAAAGCCGTC
ATGCTCGAAGTCATGAATTTGGAAAAACAGAATATCCGTTATAAATTCCA
AATGGCGAACGAAGCTCATTTGAAATCGTTCAATTGGCAAGCTGAATTTA
TTGTGGAGCCGGATAATCAATTCCATACGGTCGTTATCGATGTTTTGTCG
TTTTGGCCGACAATGTTCGGTCATGTATTGTCGTCACCCGGAAATGTCGA
TTTCTCGAAAGTTGATTGTCTCGGTATTCTAATCAGTCATGTTACTGTTG
ATGGAAAGGAAAACCCGGACTTTGTGGAGGGACCCTTCGGCCTCGCCGTG
AGGTCCATACGTCTTATTAAGAATAAGGATGATGATTAAGAGAAGAAGTA
TTTGAGTTTCCATGGTAACCTAGCAAGAACAAACCGGGGTGGATTTGCCA
GCTTTCGGATTTTACCCACAGTGAAAGACGAGTTTAGGGGCATTCTGAAA
AACACCAAAGCCGTCATGCTCGAAGTCATGAATTTGGAAAAACAGAATAT
CCGTTATAAATTCCAAATGGCGAACGAAGCTCATTTGAAATCGTTCAATT
GGCAAGCTGAATTTATTGTGGAGCCGGATAATCAATTCCATACGGTCGTT
ATCGATGTTTTGTCGTTTTGGCCGACAATGTTCGGTCATGTATTGTCGTC
ACCCGGAAATGTCGATTTCTCGAAAGTTGATTGTCTCGGTATTCTAATCA
GTCATGTTACTGTTGATGGAAAGGAAAACCCGGACTTTGTGGAGGGACCC
TTCGGCCTCGCCGTGAGGTCCATACGTCTTATTAAGAATAAGGATGATGA
TTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000350_pilon | genome | sc0000350_pilon:106974..109735 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 547-1011:466 |
| Aaloc | 400-546:1672 |
| Aaloc | 142-399:2312 |
| Aaloc | 10-141:2763 |
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