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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000391_pilon:235277..245883+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_029317 ID=XLOC_029317|Name=XLOC_029317|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=10607bp|location=Sequence derived from alignment at sc0000391_pilon:235277..245883+ (Clytia hemisphaerica_ch_hm2_pilon) ATGGGTGAAGATGTTGGCTTGGTCAAAGCTCCCAGAATTTGTGAAATGAT
CCGAGAGGAGTCGGGTTATGGATTCAATCTTCACGGAGAAAAAGGAGTTA
TTGGTCAATACATAAGTGCAATCGACCCAGGTATATAACATTTTTGGACT
GACAAGGATATGTAGGGGGTGACAGATCTTGTTTCTGAACCTTTAGGATG
ACtgaactttttgatattttaatacTTCCAAATAAATTTATATGGTTATA
TGGGCTACCAGAATTCAACATAATTGCAAACTTAGTCTCAAGTTTCATTA
ATTTATTggctttttctcaaaaaacgtgtttttttcatgttgtttttttt
gacgTTACAGGTCTGTAATTTTCTGTAAGGAGCTTGCAATATGAAAGATT
ATTGTTTTCTGTTTAGCCCTTTTACTAATGTATCTGGAAATGCATATTAA
CACTTAGTTTCCCATAAGGAGTATAACTGACACTGCATTTTATGAAATTG
TGGGTTTTGGGGTACCGCGTGATTTTGGGGTGCAACCACCTGTACCAAAG
CCAAAGCAAAGGCAAGGGAGAGGGTTATCATATCCGAGAAAGTGCAAAAA
TTAGGCACATGCAATATTTCAAATAGACGATTTTAAATACTATGTCTATT
TCCAATATTTGTGTGTTCATTAAGTCTGCTAAATGACCTGCCCTACGTCA
GCTTGGTAAAATCCGTGTGTTTtcatatgtaaacaaaagtACTTACACAT
AGTTGTGACGTCGAAAAAGTCAAGGCTAGAGACAAAACGCTGAATGAcgg
aatgccggaaccggaatagctgttccggccggaatagctattccgcggaa
tatgatttttttttatattttgtattccgcggaatatgactttttttATT
CCGCAGAATATGATTTTACTTAtatcatggatttatcatagaactctgga
tacacaacgagctggtttttcatcgatttctcatgttctagccttgtccg
cagtaatgacacattattgttcaccctcctccaTTCACTAATAATCTTTC
GTAAATTTTGttattgcatttttcatcaaaacacagctctatacaattcc
caaatgagacttaaacatctctcaagagagtcaaatgcatcaaattgatt
gctaatgatatgtcgttatgatgtttcaagctgtgagaaagatgtgacaa
acatgctatgtataagaaattgaatgttgacaccagaaaatttcaaactt
ccacctcgccaaaaccaccgtgccaccgcgtgcctccaaaagattttcat
atcactatgaagccaagatactccagtctaacatatgtcaatcctagctc
ttcccaggaaaaaattggaaagatagATATTGCCAACCTTATTTTCAGCG
TCATTCTAGGCTTTTTACtcgatttttcttgtttgatgaagtttttttca
catttaatttcataaatgtattcgttaagctttcttgctttcattttcaa
agttgcatccggtaaatatacaaaaacaagaagttacaggactttttaga
aatgggattattaatcatttttcaaaatcagggaccttcgagccgccatg
acagttgtcctttgcggacaaagctagaacatcaattgttttctaaaaca
atggaaagacaatagttcgctctccaccgttttatttgatgtttatccag
agttctatgataaatccatgctTATATCTTTTCCTCCATAATCACCTACA
AGGTGATTATGAGGGCTGTAGTAGAGGCCTCAATTGGTCCAACCAGGGAA
CTTCGCCTGACTGCTTAGTCGGCCTTGAGCAAGGTATAAATAGCCAGAAA
AAGTCCCTGAAAAAGCACTCCATGGCCTCCATACATGCTCCACATCCACG
GTTCGGGTCAAAGTCCCAATTTTTGACcagattttgataatttatgtttt
tttgggtgtagattccaaaataaGTGGTCCGAAGTCCTGAAAAATTCATG
GCAAGGCTCTAGAGGGGGGTCAGAACTCATCGTACCAGACCACCAGCTTG
GAGTCCCCGCCGGTGGGGGATGGAAAGCAGTGGGACGTTTCTACAACTCG
TGAACCACTTGGTGCTGACGCACATCTTCAGCCAAGTCTAAAACTAgtac
atagcttacactaacatgccaccgcagcaatataatatttaaagaattct
ataataaattgtataatcataacaatgtcaattgcaagattataagaaat
gcatggggacaaaaaaatagtaagtaactacacgtttgcttaaacgaaga
aataaaagattttcttttttcctgaaaataataacaataacactccatct
aaataaataaaaacgatggcctagttataattaaggtttcgacgaagcaa
gacatgaaaaaatctaattaaaaagaaatgactcttatgttttgcaagct
aaagtttattccacttaaattggcattcatttttgctatcatgtggaaac
catatcagagtaattagactactcgagtacctaataaacgtacagtagcg
aataaacgtacagggtcgaaaatggaggcatgcaaacccggggggggggt
actagggcaagatgggttacggggatgctccgctggtcagggtacctttt
ctaacctccacgagtcccaggtagggtcgcaaaaacaccaaaatggaaaa
atcattccctcgtagggtgcctttttttggaaaattttgggaaaaagtag
aaaatttgagaaaattttggaatttcagtcccattcagggtcactttttt
cgcaaatttcgagtcccacgtagggtccatttttcgaacctcagcggagc
acccccgtcggttgacaagggtagtacccccccccgggtgcaaacctaat
tgaaggatctttttaatgaggttagggggtaaatattgggtaatttgctt
tcttttgacgagtagaacaaacctcaaaaatcaaagatggatatttatca
ttagaaacaaaagtaggcacttgaaattgaggaaaatttttgttaaaatt
aataaacgtacatgtacgtttattagagTATCCTCTTGAGAGTGGTTTGT
ACatggtagcaaaacaaacttccaatttacatggaatagattttaaatgt
aagacgggttcaagaaacgagcttgtcggaacaggttgacgagataaagc
ttttaatgctttaaagattgaaacataaaaaataatcaggaataattaat
tgatttgattattgattgatttaattactgattgattgattgattgattc
tctattgctactttgcctaataaacaatagtcaagaggatactgcggata
aaatttatcaaaaagttctgcgccatcttaaatagggcgaaatagaaacc
aatcctagctaaggcccggactccactcgcctacgctttgattgtacttc
tcaagcaaaatcttttatgttgttggtcaaaagaaaaataaagatatgcc
attgtggtccattcagacgtacagtcgagaaaagttgaaatgcgcctaat
tttttttaaagtgcatagtactttttcatgatacaatcttttctccaaac
taaaagctgattgaatccattaagatgatcgcagcgcagacaatgaagaa
acgtgccttcaggaagctagactttttgagtttatagctatatactttca
ctttatggtgtttctgtatgactgtctgtgtgcctagtctaaccaccgtt
aaatgccttcgggaaggtccctcctaacttggaaagccagaattggagct
atttcaccaaactactggagcgcaagttattacgtaggctatcacaactg
aaaaagttgaatgtatgcgcctatacaaacttttttcaggtttttcaaat
agatttaccacactgaacaaacagtgaaaacactctaagtgaggtaaatc
tattttgaagaccaaaaaaaaagtttgtttacatcgattcacattcaatt
ttggattcatatgctacattctacttttttgtactttgccggtatcttgt
tttaccgtttctgtatgactgtctgtgagcctagtctaaccaccgttaaa
tgccttcgggaaggtccctcctaacttggaaagccagaattggagctatt
tcaccaaactactggagcgcaagttattacgtaggctatcacaactgaaa
aagttgaatgtatgcgcctatacaaacttttttcaggttttccaaataga
tttaccacactgaacaaacagtgaaaacactctaagtgaggtaaatctat
tttgaagaccaaaaaaaaagtttgtttacatccaaatagatttaccacac
tgaacaaacagtgaaaacactctaagtgaggtaaatctattttgaagacc
aaaaaaaaagtttgtttacatcgattcacattcaattttggattcatatg
ctacattctacttttttgtactttgccggtatcttgttttaccgagttaa
gaaagatattcccgagttacgaccatataatggtctttaaagcttaagaa
gctctataaacaataaaggtagttattaataaaataacagacaatataaa
ttacagtttgataagtttgaacaaaaatatcaacaaaatgtacatttgaa
aacttgagcaaatttctttaaagattcccgaaaaagaattgaaatcattg
ctgaaatgaacttctgactaaattacagtatttattcagttttaaagaca
agaaacaaaattagacatacaaaacactttttccattcaatgaatcgaat
cagctcatcatcataaccagtctgccattttgtttgttttgatttgcaaa
agtaatattgtaatccttgttatggtgtaattatatactttttctataat
ttgcatttataacactcgcttcagcttttcaatcctaaatcataactaat
gaaatgcaatatataataacggtaatagcatataaacgtaatatgaaaat
gtgtataacatttaccgctgtataatttaccgccatatttttgcggaaca
cttaattggccggaacatacaatacgaacaaacgcgcgcaaagattcgag
attcctgtccaatatccttgcgtgaagctatgaaggcctcctcactcgct
acgctcgttgcgggggcaaaaatACTCTGAGGGGTCCCTATTAAGCTCTG
GGCCAAGGCAAGCTAGCAAAGGTATAAGACCGCTGAGAAATAGAACTCCA
CATAGATAAAGTTGGCCCAGTGGTTTAAGGTGTCGGGTTGACACACTAGG
GATCCCCGGTTCGAAGCCGGTCaaagccaaatttaaaatttttatccagg
ttttgatttttcatatttttttgggtgtagattccgaaaaaataggtccg
aagtcctgaaaagttaaCGGAAGGGCGCTACGAGACCGTAAAGGACCCGT
CCGGGACGGTAAATGACCCCTTCCCCTAGCGCCGGACTGGGTTGCAGGAC
GGGGGTACAGACGATTGCCGGGTCGTACAGCGTTTTTAGCCGGTCAAATT
TTCTGTGAGGTAAAATTAATCTAGTTCTATCTTAGTTATATGTAAGGGAA
ACACTCAAGcataaaatcccaaacaacaccccgggaaaggtgtattcgaA
TGACTTCACAagcgaaattttggacaagtgacgaatattttccccgacga
aaattttccccggccttaatgcgttcaCCAACtgccagcaagtgacgaat
ttttccctgacgaaaattttcaccgacgaaaattttccccgacgaagttt
tccccgataagggtGAAAAAACAGCCAATGAGGTAGCCCGATTGCTGATT
ATATGTGATTATGGGTGATTGATTATGGATGATTATGTACATAGATATAC
CCTCaggggtgataaaagagaaagattattatattataatacgataataa
aaaatcatattccgcggaatagctacattacaaaaaaaatatatctataa
aaaaatcatattccgcggaatagctattccggcctattccggccggaaca
gctattccggttccgTTATTCCGTCTTTCAGCGTTTTGTCTctagccaaa
aagtcaaaacggTAGAGAACATCGTAACTTCCTTGTCAATTAAGTAgtac
agttaggaacatttggcgagttcctgtacgcgaccgcaatcaaaaaaatc
ataaaaaaattgtgtttgtgtctttttttaccgttttttgcctagaTGAT
ATAggaaacatagtaagtataaggcAGACTACGCagtgcctttaattggc
tgtaaaaaaattatgcgtcggtagaaatttcttcaactttcaacaatgat
agaacacacctatttaaaaaaaattaaccagcgcattttttatctttcta
cttcttcatcttccatgaagctctcaaagttaaatagaattaagcacata
agatattcttataattgtgaaatgttGTTCCCGCTTtcgctacggtggag
tgcatgacgtaactcgctcgccttctgttggctggtcatattgggcgttt
tggcgttaccacctcGAAGTGGGCGCCTTCGTCATTCCGCAACTCTGTct
accattttaaatgagttaacaatagatccaaaagggtgccctcatcaaga
aagatcatttgctttggtctccggctttgggaagcaGTAATGTTTTAtga
ttgttttcgatggaaaatggtaagaaacttaagtttacaagtgtcattca
gTTTTTCCTGGCTGATAGAAtagcaggatcctggatggtttccctaacag
TAGTATATATAACGAATCAATCGTAACAGGCATAGCAGGTTTTGTTTTCC
CAGAGGAGAACTAAAAATGACACATCACATTTAATGTGTGAGTGACTTTT
TTAAGCTAAATATTTCACATTTCTTTACATAATGGACATAATTCTGTAAc
ttttttgttacattgttttaattgattttcagtTCATTTACTCCCAAGAT
AATTACTTTGCACTTTTAACAACTTTCAAATCAACAGTCACTGTTTGTTA
CAATCCATTGCACATCGTGTCTTTTAGACGATTCCTATTTCAGATAACTT
GAGCTCCACCGCAGATGATTGAAAAAGTCAATTCTTCGTGTGCTTCAACT
TCACAAACTTCGCCAATCCTGGTGGTGATAAGATTTATATGAGAGTAATC
GTCACGAAAAGCGCtaataaaatatcgaaaaatggaGATTCCCAAGATTG
GCGACGGCATCTTAAATCTTGGTTAAAGAAAATCTCTttgaactttcttt
tttttcttttgttaattgctTGCGTCATTGATGACTTGCAAGGTATTTct
caggccatattttagaaaggcaaggcagcgtccgttggtggccaaaaaag
gcactttttccagtgttttccactaaaaaggctttttttacCAGTATTTT
AGTCATTTCAAGAGGGGCAGCGCCCGATAACCGGACgcttaaagggcatg
aaaaatggcctgttTCTCATAATGAAAACACACGGATTTTACCAAGCTGT
ACGTGCCCTCATTGGTTTGACGTGCCTTTGTGGTGGCCCTACGTTCCTTA
CTTACCTACGTGCTTGCGTGCCTGGCGTGCTCGCATGCTCGCATGCTCAC
GTGTCTACGCGCCCTCCAAAATTTGACCTGCTTTACGTGCCCGAAGTTTT
GACGTGtgctcaaattttgacgtgccctcgaattttggcATGCCCTCAAA
TTTCAATGtaccctcaaattttgacgtgccttgCTTAAGTATTGACGTGC
CTTCAAATTTTTACATgttctggaaatcaaaaatttgagggcacgtcaaa
atttgagggcacgtcaaaatttgagggcacatgaaaacttgagggcacgt
caaaacctgagggcacgtcaaaattcgagggcacatcaaaatttgatatg
aagGCACGTCAAATTTCGGAGGGAACGTAAGCACGCAAGCAAATAGGCAC
GTAAGGCACAAAGGCACATAGGGCACAAAGGCACTGATAAAAATGAGGGC
ACGTGGGCACGTAGAGCacgtcatttaacagactcatGTTCATTGCagga
aattgttatttttgttataaaagttattatgcaaaataaagaatcggttg
gtctaaaaatattcttccaatATGGGGGTAACCTCAGAAAAATTATTATA
TGATTATATGATTATATAACGTTATCATTATAAAAGTCTATGCTGGAGTa
attaccgtgagattgggtaacttgcatcagtggaggctaacatgcatagc
cctcaaatgaaagacctggttggtcattaaaatacaaagttaaatcaaaa
caaaaatggtatcagtagagctgcgagcggagctgcatagttcatttgtt
ttgaaattttgctgctttgattggtcagtcatttgatggctgtgcaagtt
tccctccactgatgcaagatacccgacttcacggtagttattcaaaagac
tgttgtTGACTATAATTGTACTGTTGCAAATATATAAACGACAGCCTACG
TTAGCTTTGGCCAGGATGGAACAATCTCTCCACCCCACAAGGCCTACTTA
GGCTTGTGAGAGATTATTTCATACCAGACCTCCCTAATTTcttgcttctt
tcttctttttgactcagactccTCTAACagagaacttcctttcatgaaga
cTAAATTTaataacagtgcttgaaaataatctacaatatatatgtaagcc
ctCCTTTTTAAACTATCCCCCTTCCTTCCTATCTCCACCCTTTTTCATGA
AAGtttctgatcccccttcttTATTCTTTTGGAAGGAATCGTCTGAACTA
TGatgggaaagataaaagagaaaagattagcctagtttctaatcctgata
tccTTTTGATACACCCTGAGAGCTGACAGTAAAGCTAGGCTAGACTTACC
TCTTTTCTCCTTCCCATTTtaacaatagaccttttgctaggaTATCATGT
TGAAttattaaaaactccagcatcaaaacaatgataagaaaaataCACAC
TTGAATTAATTATGCAATAAAAATGTGCCATTGTTTTAATAAtgatggag
tttttaattattcaacatgacatcctaaCCTGCAAAAGGTTACATACCTA
TATAAAATGCTTACATTAGTGGACACATAAAACACATTAACAGAATTATT
CCCCATTCAatatttatattgaaatctgcaataaaaatgaaaattgtctc
TTCTAATCAGTGCTTCCGTTAGGCACTCCAtgggaaagtctttttttaat
ttcaaccaatgagattgccaCATATGATGATGAAGGTTAACAACTAGCCC
TAATTTTGGCGCTACGGCttttgcgtttttggcagaaactcactatttta
attttatatgcagaatttttattttctgggCAGTTTCAAGTAGATATTAG
ATACactcacaaaaaaaacaaaagaaattaaaaattttggggggaaTTCT
GTGATATGATAAATGTAGTGCTAGAAGCCACACAAGGGTGTAATATCTTG
CCTCTAATTTTCAGGAAGCGCAGCTGAGAAGTCTGGATTATGTGTTGGTG
ATCGCGTTGTCGAAGTCAATGAAGTCAATGTTGAAGCAATGTCTCATGGA
GAAGTGGTCCAACAAATCCGCACTGATCCTAAAAAAGCTATTCTTTTGGT
AGTGGATAAAATCACTGATAACTATTTGAAAAAGATTAACAGACCTGTTA
CATCTGCCCTTGCCACTTATACTACTGTTCATGAAATTACAATAGAAGAA
GCTGAGAAATTACAGGAGTTGAGACTCCAAGctgaacaacaacaaaatgt
tACTGATGATGCTGATGATGATGGTAATACGCAATTGAGtgttgaagatg
aaaatgttgaaTTACAAGATTCAGATTCGTTACCATCAAATGGTGAAGAG
CCAGAAAATGAGGCCCCTGGAGACACACCTGAGTCAGAGAAAATTTCATC
TGTCCCAGGAGACATTGAATCTCCACCTCTAAATTCACATACATCAATCT
CACCAGAACCAGAAGAGCCTACTAATCAAGATCCGCCACCTGAAGAATCC
CAACCTGAAGAATCCCAACCTGAAGAATCCCAACCAGATGAAAATATATC
ACAACCAGATGAAAACATATCACAACCAGATGAAAATATATCACAACCAG
ATGAAAATATATCACAACCAGATGAAAATATATCACAACCAGATGAAAAT
ATATCACAACCAGATGAAAATATATCACAACCAGATGAAAATATATCACA
ACCAGATGAAAATATATCACAACCAGATGAAAATATATCACAACCAGATG
AAAATATATCACAACCAGATGAAAATATATCACAACCAGATGAAAATATA
TCACAACCAGATGAAAATATATCACAACCAGATGAAAATATATCACAACC
AGAAGATCCAGATTATGCAATTCTAGAATCACCTCCCCCAGAAAAGAGAT
CTGTGATAGAGTCTTCAGCAGAAAAGAGATCTGTGATAGAAGCACCGCAA
GATGAACCAACAATGCTAGATTCTCCTCAACCAGAACGAGAATCTGCAGA
GCCTGTT Coding sequence (CDS) from alignment at sc0000391_pilon:235277..245883+ >XLOC_029317 ID=XLOC_029317|Name=XLOC_029317|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1854bp|location=Sequence derived from alignment at sc0000391_pilon:235277..245883+ (Clytia hemisphaerica_ch_hm2_pilon) ATGGGTGAAGATGTTGGCTTGGTCAAAGCTCCCAGAATTTGTGAAATGAT CCGAGAGGAGTCGGGTTATGGATTCAATCTTCACGGAGAAAAAGGAGTTA TTGGTCAATACATAAGTGCAATCGACCCAGATGGGTGAAGATGTTGGCTT GGTCAAAGCTCCCAGAATTTGTGAAATGATCCGAGAGGAGTCGGGTTATG GATTCAATCTTCACGGAGAAAAAGGAGTTATTGGTCAATACATAAGTGCA ATCGACCCAGGAAGCGCAGCTGAGAAGTCTGGATTATGTGTTGGTGATCG CGTTGTCGAAGTCAATGAAGTCAATGTTGAAGCAATGTCTCATGGAGAAG TGGTCCAACAAATCCGCACTGATCCTAAAAAAGCTATTCTTTTGGTAGTG GATAAAATCACTGATAACTATTTGAAAAAGATTAACAGACCTGTTACATC TGCCCTTGCCACTTATACTACTGTTCATGAAATTACAATAGAAGAAGCTG AGAAATTACAGGAGTTGAGACTCCAAGctgaacaacaacaaaatgttACT GATGATGCTGATGATGATGGTAATACGCAATTGAGtgttgaagatgaaaa tgttgaaTTACAAGATTCAGATTCGTTACCATCAAATGGTGAAGAGCCAG AAAATGAGGCCCCTGGAGACACACCTGAGTCAGAGAAAATTTCATCTGTC CCAGGAGACATTGAATCTCCACCTCTAAATTCACATACATCAATCTCACC AGAACCAGAAGAGCCTACTAATCAAGATCCGCCACCTGAAGAATCCCAAC CTGAAGAATCCCAACCTGGAAGCGCAGCTGAGAAGTCTGGATTATGTGTT GGTGATCGCGTTGTCGAAGTCAATGAAGTCAATGTTGAAGCAATGTCTCA TGGAGAAGTGGTCCAACAAATCCGCACTGATCCTAAAAAAGCTATTCTTT TGGTAGTGGATAAAATCACTGATAACTATTTGAAAAAGATTAACAGACCT GTTACATCTGCCCTTGCCACTTATACTACTGTTCATGAAATTACAATAGA AGAAGCTGAGAAATTACAGGAGTTGAGACTCCAAGctgaacaacaacaaa atgttACTGATGATGCTGATGATGATGGTAATACGCAATTGAGtgttgaa gatgaaaatgttgaaTTACAAGATTCAGATTCGTTACCATCAAATGGTGA AGAGCCAGAAAATGAGGCCCCTGGAGACACACCTGAGTCAGAGAAAATTT CATCTGTCCCAGGAGACATTGAATCTCCACCTCTAAATTCACATACATCA ATCTCACCAGAACCAGAAGAGCCTACTAATCAAGATCCGCCACCTGAAGA ATCCCAACCTGAAGAATCCCAACCTGATGAAAATATATCACAACCAGATG AAAATATATCACAACCAGATGAAAATATATCACAACCAGATGAAAATATA TCACAACCAGAAGATCCAGATTATGCAATTCTAGAATCACCTCCCCCAGA AAAGAGATCTGTGATAGAGTCTTCAGCAGAAAAGAGATCTGTGATAGAAG CACCGCAAGATGAACCAACAATGCTAGATTCTCCTCAACCAGAACGAGAA TCTGCAGAGCCTGTTATGAAAATATATCACAACCAGATGAAAATATATCA CAACCAGATGAAAATATATCACAACCAGATGAAAATATATCACAACCAGA AGATCCAGATTATGCAATTCTAGAATCACCTCCCCCAGAAAAGAGATCTG TGATAGAGTCTTCAGCAGAAAAGAGATCTGTGATAGAAGCACCGCAAGAT GAACCAACAATGCTAGATTCTCCTCAACCAGAACGAGAATCTGCAGAGCC TGTT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000391_pilon | genome | sc0000391_pilon:235277..245883 + |
Properties
| Property Name | Value |
| Aaloc | 691-927:10371 |
| Aaloc | 133-687:9567 |
| Aaloc | 1-129:1 |
|