XLOC_029298 (mRNA) -

Overview
NameXLOC_029298
Unique NameXLOC_029298
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000391_pilon:244915..246087+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_029298 ID=XLOC_029298|Name=XLOC_029298|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1173bp|location=Sequence derived from alignment at sc0000391_pilon:244915..246087+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTCATGGAGAAGTGGTCCAACAAATCCGCACTGATCCTAAAAAAGC TATTCTTTTGGTAGTGGATAAAATCACTGATAACTATTTGAAAAAGATTA ACAGACCTGTTACATCTGCCCTTGCCACTTATACTACTGTTCATGAAATT ACAATAGAAGAAGCTGAGAAATTACAGGAGTTGAGACTCCAAGctgaaca acaacaaaatgttACTGATGATGCTGATGATGATGGTAATACGCAATTGA GtgttgaagatgaaaatgttgaaTTACAAGATTCAGATTCGTTACCATCA AATGGTGAAGAGCCAGAAAATGAGGCCCCTGGAGACACACCTGAGTCAGA GAAAATTTCATCTGTCCCAGGAGACATTGAATCTCCACCTCTAAATTCAC ATACATCAATCTCACCAGAACCAGAAGAGCCTACTAATCAAGATCCGCCA CCTGAAGAATCCCAACCTGAAGAATCCCAACCTGAAGAATCCCAACCAGA TGAAAATATATCACAACCAGATGAAAACATATCACAACCAGATGAAAATA TATCACAACCAGATGAAAATATATCACAACCAGATGAAAATATATCACAA CCAGATGAAAATATATCACAACCAGATGAAAATATATCACAACCAGATGA AAATATATCACAACCAGATGAAAATATATCACAACCAGATGAAAATATAT CACAACCAGATGAAAATATATCACAACCAGATGAAAATATATCACAACCA GATGAAAATATATCACAACCAGATGAAAATATATCACAACCAGATGAAAA TATATCACAACCAGAAGATCCAGATTATGCAATTCTAGAATCACCTCCCC CAGAAAAGAGATCTGTGATAGAGTCTTCAGCAGAAAAGAGATCTGTGATA GAAGCACCGCAAGATGAACCAACAATGCTAGATTCTCCTCAACCAGAACG AGAATCTGCAGAGCCTGTTGTTCCGATTGAGCAACAATTTAGTGTTCTTG AAGGAAAGAGCAAAAAGCAACCACCAATCGATACAAAAGTTGTTGAAAAG GATTCTAATAAAGAATCTAAGAAGGACTCTTTTAAAAAGATGTTTATGAA AACACCGAAACGTAAAGAAGTCAAACAGAATTCTGATTGGAGATCAAAAT TGGATGAATTTAATAATTTGTAG

Coding sequence (CDS) from alignment at sc0000391_pilon:244915..246087+

>XLOC_029298 ID=XLOC_029298|Name=XLOC_029298|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1770bp|location=Sequence derived from alignment at sc0000391_pilon:244915..246087+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTCATGGAGAAGTGGTCCAACAAATCCGCACTGATCCTAAAAAAGC
TATTCTTTTGGTAGTGGATAAAATCACTGATAACTATTTGAAAAAGATTA
ACAGACCTGTTACATCTGCCCTTGCCACTTATACTACTGTTCATGAAATT
ACAATAGAAGAAGCTGAGAAATTACAGGAGTTGAGACTCCAAGctgaaca
acaacaaaatgttACTGATGATGCTGATGATGATGGTAATACGCAATTGA
GtgttgaagatgaaaatgttgaaTTACAAGATTCAGATTCGTTACCATCA
AATGGTGAAGAGCCAGAAAATGAGGCCCCTGGAGACACACCTGAGTCAGA
GAAAATTTCATCTGTCCCAGGAGACATTGAATCTCCACCTCTAAATTCAC
ATACATCAATCTCACCAGAACCAGAAGAGCCTACTAATCAAGATCCGCCA
CCTGAAGAATCCCAACCTGAAGAATCCCAACCTGATGTCTCATGGAGAAG
TGGTCCAACAAATCCGCACTGATCCTAAAAAAGCTATTCTTTTGGTAGTG
GATAAAATCACTGATAACTATTTGAAAAAGATTAACAGACCTGTTACATC
TGCCCTTGCCACTTATACTACTGTTCATGAAATTACAATAGAAGAAGCTG
AGAAATTACAGGAGTTGAGACTCCAAGctgaacaacaacaaaatgttACT
GATGATGCTGATGATGATGGTAATACGCAATTGAGtgttgaagatgaaaa
tgttgaaTTACAAGATTCAGATTCGTTACCATCAAATGGTGAAGAGCCAG
AAAATGAGGCCCCTGGAGACACACCTGAGTCAGAGAAAATTTCATCTGTC
CCAGGAGACATTGAATCTCCACCTCTAAATTCACATACATCAATCTCACC
AGAACCAGAAGAGCCTACTAATCAAGATCCGCCACCTGAAGAATCCCAAC
CTGAAGAATCCCAACCTGATGAAAATATATCACAACCAGATGAAAATATA
TCACAACCAGAAGATCCAGATTATGCAATTCTAGAATCACCTCCCCCAGA
AAAGAGATCTGTGATAGAGTCTTCAGCAGAAAAGAGATCTGTGATAGAAG
CACCGCAAGATGAACCAACAATGCTAGATTCTCCTCAACCAGAACGAGAA
TCTGCAGAGCCTGTTGTTCCGATTGAGCAACAATTTAGTGTTCTTGAAGG
AAAGAGCAAAAAGCAACCACCAATCGATACAAAAGTTGTTGAAAAGGATT
CTAATAAAGAATCTAAGAAGGACTCTTTTAAAAAGATGTTTATGAAAACA
CCGAAACGTAAAGAAGTCAAACAGAATTCTGATTGGAGATCAAAATTGGA
TGAATTTAATAATTTGTAGATGAAAATATATCACAACCAGATGAAAATAT
ATCACAACCAGAAGATCCAGATTATGCAATTCTAGAATCACCTCCCCCAG
AAAAGAGATCTGTGATAGAGTCTTCAGCAGAAAAGAGATCTGTGATAGAA
GCACCGCAAGATGAACCAACAATGCTAGATTCTCCTCAACCAGAACGAGA
ATCTGCAGAGCCTGTTGTTCCGATTGAGCAACAATTTAGTGTTCTTGAAG
GAAAGAGCAAAAAGCAACCACCAATCGATACAAAAGTTGTTGAAAAGGAT
TCTAATAAAGAATCTAAGAAGGACTCTTTTAAAAAGATGTTTATGAAAAC
ACCGAAACGTAAAGAAGTCAAACAGAATTCTGATTGGAGATCAAAATTGG
ATGAATTTAATAATTTGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_029298XLOC_029298-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000391_pilongenomesc0000391_pilon:244915..246087 +
Properties
Property NameValue
Aaloc487-885:775
Aaloc1-483:1