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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000293_pilon:421894..427058+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_029170 ID=XLOC_029170|Name=XLOC_029170|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5165bp|location=Sequence derived from alignment at sc0000293_pilon:421894..427058+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAACAAATAATTAAAGTTGAACAAGAAGAACGAATATTATGTTTTCA
CGAAAATATTGAATCCATTTGCTtcaaatttgaagaagaaattgagAATG
TAAACAATATTGAGAATAGAAATATCGCTGGGAATGAGTTAGACACCGTG
AAAGTCAAAATCGAGGAGAAGGATAATGATTTTGTTAGTATTGATGGTAA
TGCTACGACAGCAAGTCTGCAAATTGATTCGTGCATTGAtatcaaaattg
aatttgatgaaatttcaacctttgCTGCAGAAGAATCGTCAAATACTGAT
TATTTAACAGAAATCGAGAGTTCGATTGTGGAAAGCGAAAAGGAACGAAT
AAAAGAAGGTGCCGATAATTCcaataattattttgagtgtAATGACTGTG
GTGCTTGTTATACATCAAAGGAGTTCCTTGGTCAacatttcgttcaaaaa
caTCATGTAATTAATAATCTAAATTGTGCTGTTTGTGGTAAACACTTTAC
GCAAAAATATAActtgaaagaacatttcaaaactCATACTGGAGAAAAAC
CTTTTAAgtgtgaagaatgtggtaaacTCTTCACCCAAAAATATAActtg
aaagaacatttcaaaactCATACTGGAGAAAAACCTTTCAAGTGTGAAGA
ATGTGGTATACATTTCACACAAAAAGGCAACTTGAAAAAACATTTGAGAA
CTCATACTGGAGAAAAACCTTTTAAgtgtgaagaatgtggtaagCAGTTT
ACTCAAAATAGCAACTTGAAAACACATTTGAGAACTCATTCAGGTGGAAA
GCCTTTTAAgtgtgaagaatgtggtaaacTCTTCACCCAAAAATATAACT
TGACAGAACATTTCAAAACTCATACTGGAGAAAAACCTTTCAagtgtcaa
gaatgtggtataCACTTCACACAAAAAGGCAACTTGAAAAAACATTTGAG
AACTCATTCAGGTGGAAAACCTTTCAAgtgtgaagaatgtggtaaactct
tcacccaaaaaaagaacTTGACAGAACATTTCAAAACTCATACTGGAGAA
AAACCTTTTAAgtgtgaagaatgtggtaagCAGTTTACTCAAAATAGCAA
CTTGAAAAAACATTTGAGAACTCACACAGgagaaaaacaatttgaatgTC
AAGAGTGTGGTAAATGCTTTATGCAAAAGGGTACCTTGAAAAGACATTTG
AGAACTCATACAGGAGAGAAACAATTTGAATGTCAAGAGTGTGGTAAATG
CTTTATGCAAAAGGGTACCTTGAAAACTCATATGAGAACTCATGATGGAG
AAAAAATGTGGTAAAACTTTTAGATGCAAAAAACATCTCTCAAGACATCA
CAATTGAATTCACAAAAAGGAATGAAACTTACTTTTGCAGATATATACCC
ATTTATGAATTTAGTTTATAACTTTTAACCTgtgtttgtccgttcgtccg
ttcatctgttaccaacttttctcgggattgaatcataggaaaattttgtg
atttttgatacaaaggtgcaaaatggttaTTACCAAAAAgtctgattttc
gaaaaaaataatttaggccaattttggcccaaaaaatgcccaaaaatagG
GGTTTTTGGCATAGTGGGcagcacccctccaacccccacctgaataaagt
cacccccacctgcatagggtaacccccacctgaaaaatgctaccgaccca
acccccaccttcttggaccacccccacctaaattctgaaaagtttccaac
ccccacctgaaaaaggtttttgactgttttaacaattttgagggtaagca
aggttaatcacttgaaaataatttctatgctttttatacttcatacatct
tttgttataattattagacttgggaagaaatagatttttactgtcaatgt
atatgtttatgatgagcagggttgaaagaaagtttttgagtcaaaataag
aaaactagtaaataaactctccaacccccacctgaaaaaagtcaccccca
cctgtatagggtaacccccacctAAGATTTGTGAGCAGGCTAACCCCCAC
ctgcttaaatttttctgaaaacctcCAAcccccccTAAAGTTAggggggg
gTTCCCACtatgtttggactttgttaaatttgttcattagtttttcctag
tTTTTTGTACAATGACGTAAAATTAAATTGTGCTAATTATGGAAAAATTT
TGGGCCCaacttgcaaaattttaaatcattCAGTTTTTGTTTCTGCAATG
TTGTCttcaataaacttttattattcgttttataaacagGTAGGTCCTCA
AAAGTATTGCTTGTttaattattttaaaacttttctttttagaaacattt
aaaacaaacaaatgagAACCTTTTATTGATATGGAACAAATAATTAAAGT
TGAACAAGAAGAACAAATATGTTTTCACGAAAATATTGAATCCATTTGCT
tcaaatttgaagaagaaattgagAATGTAAACAATTGAGAATAGAAATAT
CGCTGGGAATGAGTTGGACACCGTGAAGTCAAAATCGAGGAGAAGGATTA
TGATTTTGTTAGTATTGATGGTAATGCTACGACAGCAAGTCTGCAAATTG
ATTCGTCCATTGAtatcaaaattgaatttgatgaaatttcaacctttgCT
GCAGAAGAATCGTCAAATACTGATTATTTAACCAAAATCGCGAGTTCGAT
TGTGGAAAGTGAAAAGGAACGAATAAAAGAAGGCGATAATTCcaataatt
attttgagtgtAATGACTGTGGTGCTTGTTATACATCAAAGGAGTTCCTT
GATCAacatttcgttcaaaaacaCCGTCTAATTAATAATCTAAATTGTGC
TGTTTGTTGTAAACACTTTACGCAAAAATATAACTTGAATGTCCATTTAA
GAACTCACACAGGAGAAAGACCTTTTCaatgtgaagaatgtggtaaatcc
tTTACTTACAAATCGTGCTTGAACATTCACTTGAGGTCTCATACAGGAAA
GgatcaagaatgtggtaaacaATTTACCGAAAGTAGAGCAGCAAATGGGA
TGAGCCGAACCAATGATTCACcaagcaaatattttaaatgtaaTAAATGT
GGCGTATGTTATACTACAAAAGAGTTCCTTGAAAAGCATTTCTTACAAAA
ACATAGTAATAACACAAAGTTTCAGTTCAgttaaaaatcagtgattttcg
atggaattttcaacagtttactactgaaaaatgacactttaatgtaaatt
ttagtcctTATTTACTAATCATaaatagcaatttttaaaaattttggtgt
TATTTTTTAACGGCCCTAATtagtaagcccaaaattaggctgcaGCGtga
taagggccggcgtaaaaagggatGAGGTATCTGGAATGaaaaaaaGCTTG
TTATCCCTTGAGTTATTAAGAGGCCTATAAACAGACTTTTAGGTTTTTCA
ATAGGGGGTGCTGGTCGTCCCTTCTACCTCGTAGTAAATCATAACATctg
atttctatttttttcctttaCGTAGATATAAAGCTTAGTAAGATAGATAT
TGTATAACAATAATGGACAAAAATCCCGaagaatataaaaaagaaaataa
tgattCTGTTTGTGCGGTAAAGCATGAAAGTGACTTATTGCTTAAGAAAA
TGCTAACCTTGGATATTGGGGAAGATGAAAGTACAATGATAGCAAAAGCC
TTATCACCTAAAGAATCCAGTTTAAATGTTGCGGATACCATTTGTACAAT
GATAGCAAAAGCCTTATCACCTAAAGAATCCAGTTTAAATGTTGCGGATA
CCATTTGTGATAATATAGCAGTTAAATGCGATTCAAAGTTGACAACTTAT
CAATGtgcaaaatgtaaaaaatatttaccaAGTATGTTTTTATTAGCCTT
GCATGACCGAACTCATACTGGTTTGGATCCATCCGAATGtggaaaatgtg
gaaaatgtttCTGCTTTTGTTTTTGAGATAAATATACACATTTATAGTTA
CTATGTAAACTGGTGTATGTGGACGGAGATTTGTAATAtgttattttcaa
catttcacTTTTTCAGAAGAATATTTTAATCTTCATATTTTTCGTCTagg
acttttttacaaacaattCTTGAATACTTGGTTCTTTAGCTTTTGATATT
GATATGTCATAATGacaataaaaaaatgacaacaTAATCTTAGGTAACAA
TTGCTTGTTTGCTCAGGATTTTTCTAAATAGCAATTGTTCTGCAATatgt
ttttgagcacttttttCCAAATAATTCATTACAATGTATTTTCTTCCTTT
CTCTAATAAAATATAATGGACAATGCACCTTACAAATCCCAGGCATTTGC
GATACTAAAATTTCAATCAAGCCTCGTGAAAAACATAGCTTCGTTTAAAT
TATTTTGCGAGTTGGAAAGATATCTACTTTATCAATATCTACTTCATAAA
GAAGTAAAGTTatcttcttaacatttttttcattttccttttagaaaaaa
aatcaagataaaaactCCCAGTCTTGACAATggagattgaaaatgaagtc
aCAGACTGTAACATGGAAAGTAATTTTAGTTTTACATGGAATGAACCAAT
CAATGGGAGAGaacttgattttgaagaccagaCTTTGGATTTCAATGATC
TTGTTAGGACCACTTTGGATATGGAAAAAACAGATATGACCAGTCTGCAG
ATTGATTTGGTCCCTGATTTAATTTCTAAAGATAATGAAGTTTTAACCAT
GGAAACCTCCGATAATCTGTCAATATCTACGGAAGAAGACTTGTCAAATA
ctgaaaatttaatggaaatGGCAAGTTCAATTGTTATAGATGAAGAagaa
aggaaaaatgaaaattatttcaaatgcaTAAAGTGTAGTTTCTGTTTCGA
CAAAAAGGAGTTCCTTAATGAGCATATACAAAAAGTACATGGTGAAGTCA
TGGGTTTTCaatgtgaagaatgtggtaagCAGTTTACTCAAAATAGCAAC
TTGAAAGCACATTTGAGAACTCATTTAGGTGGAAAGCCTTTTAAgtgtga
agaatgtggtaaacTCTTTACCCaaaaaaaGAACTTGACAGAACATTTCA
AAACTCATACTGGAGAAAAACCTTTCAAGTGTGAAGAATGTGGTATACAC
TTCACACAAAAAGGC Coding sequence (CDS) from alignment at sc0000293_pilon:421894..427058+ >XLOC_029170 ID=XLOC_029170|Name=XLOC_029170|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1356bp|location=Sequence derived from alignment at sc0000293_pilon:421894..427058+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAACAAATAATTAAAGTTGAACAAGAAGAACGAATATTATGTTTTCA
CGAAAATATTGAATCCATTTGCTtcaaatttgaagaagaaattgagAATG
TAAACAATATTGAGAATAGAAATATCGCTGGGAATGAGTTAGACACCGTG
AAAGTCAAAATCGAGGAGAAGGATAATGATTTTGTTAGTATTGATGGTAA
TGCTACGACAGCAAGTCTGCAAATTGATTCGTGCATTGAtatcaaaattg
aatttgatgaaatttcaacctttgCTGCAGAAGAATCGTCAAATACTGAT
TATTTAACAGAAATCGAGAGTTCGATTGTGGAAAGCGAAAAGGAACGAAT
AAAAGAAGGTGCCGATAATTCcaataattattttgagtgtAATGACTGTG
GTGCTTGTTATACATCAAAGGAGTTCCTTGGTCAacatttcgttcaaaaa
caTCATGTAATTAATAATCTAAATTATGGAACAAATAATTAAAGTTGAAC
AAGAAGAACGAATATTATGTTTTCACGAAAATATTGAATCCATTTGCTtc
aaatttgaagaagaaattgagAATGTAAACAATATTGAGAATAGAAATAT
CGCTGGGAATGAGTTAGACACCGTGAAAGTCAAAATCGAGGAGAAGGATA
ATGATTTTGTTAGTATTGATGGTAATGCTACGACAGCAAGTCTGCAAATT
GATTCGTGCATTGAtatcaaaattgaatttgatgaaatttcaacctttgC
TGCAGAAGAATCGTCAAATACTGATTATTTAACAGAAATCGAGAGTTCGA
TTGTGGAAAGCGAAAAGGAACGAATAAAAGAAGGTGCCGATAATTCcaat
aattattttgagtgtAATGACTGTGGTGCTTGTTATACATCAAAGGAGTT
CCTTGGTCAacatttcgttcaaaaacaTCATGTAATTAATAATCTAAATT
gtgaagaatgtggtaagCAGTTTACTCAAAATAGCAACTTGAAAGCACAT
TTGAGAACTCATTTAGGTGGAAAGCCTTTTAAgtgtgaagaatgtggtaa
acTCTTTACCCaaaaaaaGAACTTGACAGAACATTTCAAAACTCATACTG
GAGAAAAACCTTTCAAGTGTGAAGAATGTGGTATACACTTCACACAAAAA
GGCgtgaagaatgtggtaagCAGTTTACTCAAAATAGCAACTTGAAAGCA
CATTTGAGAACTCATTTAGGTGGAAAGCCTTTTAAgtgtgaagaatgtgg
taaacTCTTTACCCaaaaaaaGAACTTGACAGAACATTTCAAAACTCATA
CTGGAGAAAAACCTTTCAAGTGTGAAGAATGTGGTATACACTTCACACAA
AAAGGC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000293_pilon | genome | sc0000293_pilon:421894..427058 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 478-678:4965 |
| Aaloc | 1-474:1 |
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